MacroAPE 1083:HNF4G f1

Full Name: HNF4G_f1

Motif matrix

PO A C G T 1 0.24019607843137272 1.612745098039215 4.906862745098041 0.24019607843137272 2 0.0 0.0 5.0784313725490176 1.921568627450983 3 1.0980392156862728 3.568627450980396 1.9901960784313721 0.3431372549019604 4 0.0 7.0 0.0 0.0 5 5.147058823529413 1.372549019607843 0.0 0.48039215686274467 6 4.529411764705877 1.372549019607843 1.0980392156862728 0.0 7 6.519607843137256 0.0 0.48039215686274467 0.0 8 0.0 0.0 7.0 0.0 9 0.0 1.372549019607843 0.823529411764703 4.803921568627454 10 1.372549019607843 4.460784313725489 0.0 1.166666666666669 11 0.0 7.0 0.0 0.0 12 7.0 0.0 0.0 0.0

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
HNF4A#MA0114.1	1	1.92401e-07	9.15831e-05	0.00018254	12	GGCCAAAGTCCA	AGGCCAAAGGTCA	+
NR2F1#MA0017.1	2	1.25697e-05	0.00598318	0.00596271	12	GGCCAAAGTCCA	AGGTTCAAAGGTCA	-
PPARG::RXRA#MA0065.2	3	6.40379e-05	0.0304821	0.0202519	12	GGCCAAAGTCCA	GTAGGGCAAAGGTCA	+
PPARG::RXRA#MA0065.2	5	0.00176691	0.841051	0.396194	12	GGCCAAAGTCCA	CTAGGGGTCAAAGGTCATCG	+
NR1H2::RXRA#MA0115.1	3	0.00208799	0.993885	0.396194	12	GGCCAAAGTCCA	AAAGGTCAAAGGTCAAC	+
Esrrb#MA0141.1	0	0.00327089	1.55694	0.485411	12	GGCCAAAGTCCA	AGCTCAAGGTCA	+
BAS1#MA0278.1	4	0.00361034	1.71852	0.485411	12	GGCCAAAGTCCA	GCACAGCCAGAGTCAAGTCAA	+
GAL4#MA0299.1	2	0.00409309	1.94831	0.485411	12	GGCCAAAGTCCA	CGGGGAACAGTACTC	+
tll#MA0459.1	-3	0.00751852	3.57882	0.747594	9	GGCCAAAGTCCA	AAAAGTCAAA	+
Foxa2#MA0047.2	-2	0.00787983	3.7508	0.747594	10	GGCCAAAGTCCA	CCTAAGTAAACA	-
PBF#MA0064.1	-4	0.0143025	6.808	0.99658	5	GGCCAAAGTCCA	AAAGC	+
Dof3#MA0021.1	-4	0.016089	7.65837	0.99658	6	GGCCAAAGTCCA	AAAGCG	+
MET28#MA0332.1	-2	0.0207066	9.85633	0.99658	6	GGCCAAAGTCCA	CCACAG	-