MacroAPE 1083:RREB1 si

Full Name: RREB1_si

Motif matrix

PO A C G T 1 6.822545901012192 3.088727049493904 10.103514891076204 5.985212158417674 2 2.059151366329265 4.11830273265853 10.748606693100614 9.073939207911577 3 0.0 7.014787841582326 16.088727049493905 2.896485108923796 4 2.059151366329265 0.0 14.866909425759145 9.073939207911577 5 2.059151366329265 2.896485108923796 11.970424316835373 9.073939207911577 6 4.11830273265853 0.8373337425945206 11.133090574240857 9.911272950506095 7 0.0 0.8373337425945206 20.207029782152436 4.955636475253048 8 0.0 3.7338188515183144 13.192241940570106 9.073939207911577 9 0.0 0.8373337425945206 17.310544673228637 7.852121584176844 10 0.0 0.8373337425945206 23.103514891076205 2.059151366329265 11 0.0 2.5120012277835615 15.251393306899386 8.23660546531706 12 0.0 0.0 1.6746674851890413 24.325332514810967 13 0.8373337425945206 0.0 24.325332514810967 0.8373337425945206 14 2.059151366329265 2.5120012277835615 12.35490819797559 9.073939207911577 15 0.0 0.8373337425945206 6.177454098987808 18.985212158417674 16 1.6746674851890413 0.8373337425945206 4.11830273265853 19.369696039557915 17 0.0 0.8373337425945206 8.23660546531706 16.92606079208842 18 0.0 1.6746674851890413 24.325332514810967 0.0 19 1.6746674851890413 0.0 17.310544673228637 7.014787841582326 20 0.0 0.8373337425945206 22.266181148481685 2.896485108923796 21 0.0 0.0 17.310544673228637 8.689455326771363 22 3.926060792088422 3.5415769109482063 5.147878415823156 13.384483881140218

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
RREB1#MA0073.1	-1	2.49717e-34	1.18865e-31	2.37731e-31	20	GGGGGGGGGGGTGGTTTGGGGT	TGGGGGGGGGTGGTTTGGGG	-
Pax4#MA0068.1	1	5.99012e-07	0.00028513	0.00028513	22	GGGGGGGGGGGTGGTTTGGGGT	GGGGGGGGAGTGGAGTATTGGAAATTTTTC	-
ADR1#MA0268.1	-15	0.00157934	0.751767	0.501178	7	GGGGGGGGGGGTGGTTTGGGGT	GTGGGGT	-
YGR067C#MA0425.1	-8	0.00477413	2.27249	0.859624	14	GGGGGGGGGGGTGGTTTGGGGT	TGAAAAAGTGGGGT	-
HAP4#MA0315.1	-4	0.00566648	2.69724	0.859624	15	GGGGGGGGGGGTGGTTTGGGGT	TCGCCTCTGATTGGT	-
RUNX1#MA0002.2	-6	0.00648601	3.08734	0.859624	11	GGGGGGGGGGGTGGTTTGGGGT	GTCTGTGGTTT	+
Macho-1#MA0118.1	-4	0.00754096	3.5895	0.859624	9	GGGGGGGGGGGTGGTTTGGGGT	TGGGGGGTC	+
RPH1#MA0372.1	-14	0.00781245	3.71872	0.859624	8	GGGGGGGGGGGTGGTTTGGGGT	TTAGGGGT	-
SP1#MA0079.1	-6	0.010211	4.86042	0.859624	10	GGGGGGGGGGGTGGTTTGGGGT	GGGGCGGGGT	+
ESR1#MA0112.2	-2	0.010607	5.04892	0.859624	20	GGGGGGGGGGGTGGTTTGGGGT	AGGTCAGGGTGACCTGGGCC	-
BRCA1#MA0133.1	-12	0.0109376	5.20629	0.859624	7	GGGGGGGGGGGTGGTTTGGGGT	GTGTTGT	-
Gfi#MA0038.1	-8	0.0112731	5.366	0.859624	10	GGGGGGGGGGGTGGTTTGGGGT	CAGTGATTTG	-
SWI5#MA0402.1	-8	0.0125731	5.98477	0.859624	8	GGGGGGGGGGGTGGTTTGGGGT	TGCTGGTT	+
AFT1#MA0269.1	-2	0.0130466	6.21018	0.859624	20	GGGGGGGGGGGTGGTTTGGGGT	CCAATCGGGTGCAATATGTAA	-
NDT80#MA0343.1	0	0.0135445	6.44718	0.859624	21	GGGGGGGGGGGTGGTTTGGGGT	TTGCGTTTTTGTGGCCGGAAA	-
AFT2#MA0270.1	-7	0.016696	7.94729	0.993412	8	GGGGGGGGGGGTGGTTTGGGGT	GGGGTGTG	-
INSM1#MA0155.1	-11	0.0180609	8.59697	1	11	GGGGGGGGGGGTGGTTTGGGGT	TGTCAGGGGGCG	+
Gamyb#MA0034.1	-9	0.0200171	9.52816	1	10	GGGGGGGGGGGTGGTTTGGGGT	GGCGGTTGTC	-