MacroAPE 1083:TGIF1 f1

Full Name: TGIF1_f1

Motif matrix

PO A C G T 1 2.467741935483878 1.4806451612903269 2.467741935483878 6.525806451612916 2 0.9870967741935512 0.0 10.967741935483897 0.9870967741935512 3 0.9870967741935512 0.0 3.948387096774205 8.006451612903243 4 0.0 7.896774193548397 4.058064516129038 0.9870967741935512 5 9.980645161290346 0.9870967741935512 0.0 1.9741935483871025 6 1.9741935483871025 2.0838709677419356 6.909677419354859 1.9741935483871025 7 1.9741935483871025 2.0838709677419356 6.909677419354859 1.9741935483871025 8 2.9612903225806537 0.0 0.0 9.980645161290346 9 0.9870967741935512 1.9741935483871025 9.980645161290346 0.0 10 2.9612903225806537 0.0 1.9741935483871025 8.006451612903243 11 0.0 8.883870967741947 2.0838709677419356 1.9741935483871025 12 8.993548387096794 0.0 3.948387096774205 0.0 13 1.9741935483871025 5.045161290322589 3.948387096774205 1.9741935483871025 14 0.9870967741935512 8.006451612903243 1.9741935483871025 1.9741935483871025 15 2.9612903225806537 1.9741935483871025 1.9741935483871025 6.0322580645161405 16 1.4806451612903269 2.467741935483878 5.538709677419365 3.4548387096774293

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon

TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya

Target_ID	Optimal_offset	p-value	E-value	q-value	Overlap	Query consensus	Target consensus	Orientation
INSM1#MA0155.1	0	0.000592977	0.282257	0.303337	12	TGTCAGGTGTCACCTG	TGTCAGGGGGCG	+
sna#MA0086.1	-3	0.000642361	0.305764	0.303337	6	TGTCAGGTGTCACCTG	CAGGTG	+
vis#MA0252.1	-6	0.00194019	0.92353	0.390309	6	TGTCAGGTGTCACCTG	CTGTCA	-
HAC1#MA0310.1	-3	0.00269412	1.2824	0.390309	8	TGTCAGGTGTCACCTG	CACGTGTC	-
h#MA0449.1	-1	0.00286747	1.36491	0.390309	10	TGTCAGGTGTCACCTG	GGCACGTGCC	+
ZEB1#MA0103.1	-3	0.00330615	1.57373	0.390309	6	TGTCAGGTGTCACCTG	CAGGTG	-
Six4#MA0204.1	-6	0.00330615	1.57373	0.390309	6	TGTCAGGTGTCACCTG	GTATCA	-
ceh-22#MA0264.1	0	0.00405344	1.92944	0.400727	11	TGTCAGGTGTCACCTG	TTTCAAGTGGT	-
Tal1::Gata1#MA0140.1	2	0.00503523	2.39677	0.400727	16	TGTCAGGTGTCACCTG	CTTATCTGTCCCCACCAG	-
GCN4#MA0303.1	2	0.0051391	2.44621	0.400727	16	TGTCAGGTGTCACCTG	CAAGGGATGAGTCATACTTCA	+
RTG3#MA0376.1	4	0.00581532	2.76809	0.400727	16	TGTCAGGTGTCACCTG	GACTAAGCACGTGCTAATAT	-
BAS1#MA0278.1	3	0.00582389	2.77217	0.400727	16	TGTCAGGTGTCACCTG	GCACAGCCAGAGTCAAGTCAA	+
CUP9#MA0288.1	-3	0.00594018	2.82753	0.400727	9	TGTCAGGTGTCACCTG	AATGTGTCA	-
Mafb#MA0117.1	-6	0.00639241	3.04279	0.402485	8	TGTCAGGTGTCACCTG	GCGTCAGC	-
Gamyb#MA0034.1	-1	0.00768525	3.65818	0.453643	10	TGTCAGGTGTCACCTG	GGCGGTTGTC	-
TYE7#MA0409.1	-2	0.00876093	4.1702	0.486718	7	TGTCAGGTGTCACCTG	TCACGTG	-
GAL4#MA0299.1	-1	0.0153882	7.32477	0.628001	15	TGTCAGGTGTCACCTG	GAGTACTGTTCCCCG	-
PPARG::RXRA#MA0065.2	5	0.0156338	7.44171	0.628001	15	TGTCAGGTGTCACCTG	CTAGGGGTCAAAGGTCATCG	+
twi#MA0249.1	0	0.0156727	7.46022	0.628001	12	TGTCAGGTGTCACCTG	TCGCATATGTTG	+
achi#MA0207.1	-6	0.0161109	7.66879	0.628001	6	TGTCAGGTGTCACCTG	CTGTCA	-
ESR1#MA0112.2	-1	0.016859	8.0249	0.628001	15	TGTCAGGTGTCACCTG	GGCCCAGGTCACCCTGACCT	+
hth#MA0227.1	-6	0.0171675	8.17174	0.628001	6	TGTCAGGTGTCACCTG	CTGTCA	-
ARG81#MA0272.1	-5	0.0172885	8.22933	0.628001	8	TGTCAGGTGTCACCTG	AGAGTCAC	-
PPARG::RXRA#MA0065.2	3	0.0200321	9.53527	0.677219	12	TGTCAGGTGTCACCTG	GTAGGGCAAAGGTCA	+
Pax4#MA0068.1	-1	0.0200775	9.55691	0.677219	15	TGTCAGGTGTCACCTG	GGGGGGGGAGTGGAGTATTGGAAATTTTTC	-