NonredundantMotifs:113

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant113
• db :UNIPROBE
• Id :Rhox11_2205.1
• name :CELL08
• score :0.017889066603791456
  
• External refs:

EntrezGene:298346
UniProt:298346

EntrezGene:194738
UniProt:194738

• Internal refs:

EntrezGene:298346

EntrezGene:194738

Motif matrix

P0 A C G T 1 0.504898202286499 0.140203542278687 0.135418230098992 0.219480025335822 2 0.282347535703405 0.244881453360158 0.300572115167169 0.172198895769268 3 0.183939394108432 0.100669712681586 0.384783188447554 0.330607704762429 4 0.326709234222526 0.269523319779715 0.194043490217059 0.2097239557807 5 0.142989094755767 0.55739279787912 0.0668258170712701 0.232792290293843 6 0.0383563035950062 0.0140519832399898 0.932450144850589 0.0151415683144146 7 0.092102144037025 0.7788437074114 0.125081929257435 0.00397221929413972 8 0.0102539808428305 0.00125195698258373 0.00523067077519557 0.98326339139939 9 0.0334862164690952 0.000890569761930885 0.947485793838994 0.0181374199299797 10 0.00535960235539802 0.00740705193629701 0.00372911841414499 0.98350422729416 11 0.603485233500431 0.00717936793441746 0.00348228839061932 0.385853110174532 12 0.798025727305311 0.0297882414026864 0.0323698093825484 0.139816221909455 13 0.52962238030381 0.100632388179877 0.0165070666971172 0.353238164819196 14 0.243580758972542 0.126094417797826 0.401401847564122 0.22892297566551 15 0.20748400399558 0.285455573348398 0.353714762662594 0.153345659993428 16 0.28241264977596 0.188409542780794 0.441463256233886 0.08771455120936 17 0.422774156888567 0.152964990711796 0.0941056640263262 0.330155188373311