NonredundantMotifs:118

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant118
• db :SWISSREGULON
• Id :POU6F1.p2
• name :POU6F1
• score :0.03323062020154045
  
• External refs:

EntrezGene:5463
UniProt:5463

• Internal refs:

EntrezGene:5463

Motif matrix

PO A C G T 1 42.557138 1.724301 138.766552 0.892626 2 24.987809 140.968461 2.58498 15.399367 3 160.797641 0.914276 7.614839 14.613861 4 18.009781 2.680297 3.733417 159.517122 5 152.060941 8.213805 5.302818 18.363053 6 169.240198 3.726728 7.36561 3.608081 7 60.855464 2.810537 0.939475 119.335141 8 7.981627 0 0 175.95899 9 18.153798 17.484917 5.424454 142.877448 10 182.153249 0.854631 0 0.932737 11 1.827409 5.598665 7.345752 169.168791