NonredundantMotifs:189

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant189
• db :HOCOMOCO
• Id :AIRE_f2
• name  :
• score :0.050140673277554296
  
• External refs:

EntrezGene:326
UniProt:326

• Internal refs:

EntrezGene:326

Motif matrix

P0 A C G T 1 16.428571428571484 10.795918367346953 5.1632653061224625 8.918367346938803 2 7.51020408163268 7.51020408163268 5.632653061224489 20.65306122448985 3 5.632653061224489 5.632653061224489 8.448979591836776 21.591836734693906 4 1.877551020408166 0.0 36.612244897959265 2.8163265306122534 5 0.0 0.0 33.79591836734698 7.51020408163268 6 13.14285714285717 1.877551020408166 0.938775510204083 25.346938775510242 7 15.959183673469415 3.755102040816336 0.938775510204083 20.65306122448985 8 15.02040816326536 5.632653061224489 5.632653061224489 15.02040816326536 9 14.081632653061265 2.8163265306122534 5.632653061224489 18.775510204081698 10 21.591836734693945 3.755102040816336 5.632653061224489 10.326530612244925 11 15.959183673469415 1.877551020408166 2.8163265306122534 20.65306122448985 12 9.38775510204083 5.632653061224489 2.8163265306122534 23.469387755102094 13 0.0 0.938775510204083 36.612244897959265 3.755102040816336 14 0.0 0.0 40.36734693877556 0.938775510204083 15 9.38775510204083 3.755102040816336 10.326530612244925 17.836734693877606 16 2.8163265306122534 7.51020408163268 7.51020408163268 23.469387755102094 17 18.77551020408166 0.938775510204083 6.571428571428585 15.02040816326536 18 16.663265306122497 11.030612244898006 4.45918367346938 9.153061224489816