UBERON:0000473

Name:	testis
Namespace:	FANTOM
Definition:	"gonad of a male animal, produces and releases sperm." [Wikipedia:Testis]
Xrefs:	Expandlinks: AAO:0000606 BILA:0000124 BTO:0001363 EFO:0000984 EHDAA2:0002007 EHDAA:8146 EMAPA:17972 EV:0100102 FBbt:00004928 FMA:7210 GAID:396 galen:Testis HAO:0001007 [ 200px-Gray1144.png] MA:0000411 MAT:0000132 MESH:A.05.360.444.849 MIAA:0000132 ncithesaurus:Testis OpenCyc:Mx4rvVjM25wpEbGdrcN5Y29ycA SCTID:181431007 TAO:0000598 VHOG:0000252 WBbt:0006794 XAO:0000157 ZFA:0000598
Synonyms:	"genitalia of male organism gonad" EXACT [OBOL:automatic] "genitalia of male organism gonada" EXACT [OBOL:automatic] "gonad of genitalia of male organism" EXACT [OBOL:automatic] "gonad of male genitalia" EXACT [OBOL:automatic] "gonad of male genitals" EXACT [OBOL:automatic] "gonad of male organism genitalia" EXACT [OBOL:automatic] "gonad of male organism reproductive system" EXACT [OBOL:automatic] "gonad of male reproductive system" EXACT [OBOL:automatic] "gonad of reproductive system of male organism" EXACT [OBOL:automatic] "gonada of genitalia of male organism" EXACT [OBOL:automatic] "gonada of male genitalia" EXACT [OBOL:automatic] "gonada of male genitals" EXACT [OBOL:automatic] "gonada of male organism genitalia" EXACT [OBOL:automatic] "gonada of male organism reproductive system" EXACT [OBOL:automatic] "gonada of male reproductive system" EXACT [OBOL:automatic] "gonada of reproductive system of male organism" EXACT [OBOL:automatic] "male genitalia gonad" EXACT [OBOL:automatic] "male genitalia gonada" EXACT [OBOL:automatic] "male genitals gonad" EXACT [OBOL:automatic] "male gonad" EXACT [OBOL:automatic] "male organism genitalia gonad" EXACT [OBOL:automatic] "male organism genitalia gonada" EXACT [OBOL:automatic] "male organism reproductive system gonad" EXACT [OBOL:automatic] "male organism reproductive system gonada" EXACT [OBOL:automatic] "male reproductive system gonad" EXACT [OBOL:automatic] "male reproductive system gonada" EXACT [OBOL:automatic] "orchis" RELATED [BTO:0001363] "reproductive system of male organism gonad" EXACT [OBOL:automatic] "reproductive system of male organism gonada" EXACT [OBOL:automatic] "testes" RELATED PLURAL [] "testicle" EXACT [FMA:7210] "testiculus" RELATED [BTO:0001363]
Alt_id:	UBERON:0002117 UBERON:CARO_0000027-FBbt_00004927-FBbt_00004928-FBbt_00007004-FMA_45664-FMA_7210-MA_0000396-MA_0000411-MIAA_0000029-MIAA_0000132-WBbt_0006794-XAO_0000155-XAO_0000157-XAO_0003006-ZFA_0000242-ZFA_0000598
Subset:	organ_slim uberon_slim vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	UBERON:0000991(gonad),UBERON:0003135(male reproductive organ)
disjoint_from:	UBERON:0000992(female gonad),UBERON:0009117(indifferent gonad)
develops_from:	UBERON:0009117(indifferent gonad)
part_of:	UBERON:0000079(male reproductive system)

Children

is a:	FF:10590-108D5 (testicular germ cell embryonal carcinoma cell line:NEC8),FF:10591-108D6 (testicular germ cell embryonal carcinoma cell line:NEC14),FF:10593-108D8 (testicular germ cell embryonal carcinoma cell line:NEC15)
derives from:	FF:0010026 (human testis - adult sample),FF:0011332 (mouse testis- embryo E13 sample),FF:0011352 (mouse testis- embryo E15 sample),FF:0011364 (mouse testis- embryo E16 sample),FF:0011372 (mouse testis- embryo E17 sample),FF:0011377 (mouse testis- embryo E18 sample),FF:0011383 (mouse testis- adult sample),FF:0011412 (mouse testis- neonate N07 sample),FF:0011422 (mouse testis- neonate N10 sample),FF:0011433 (mouse testis- neonate N20 sample),FF:0011495 (mouse testis- neonate N30 sample),FF:0011509 (mouse testis- neonate N00 sample),FF:0101560 (testicular cancer cell line sample)
part of:	UBERON:0000998 (seminal vesicle),UBERON:0001343 (seminiferous tubule of testis),UBERON:0004910 (epithelium of male gonad),UBERON:0005297 (testis sex cord)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

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Human (Homo sapiens)

• 10026-101D8 (testis, adult, pool1)
• 10096-102C6 (testis, adult, pool2)
• 10201-103F3 (seminal vesicle, adult)
• 10590-108D5 (testicular germ cell embryonal carcinoma cell line:NEC8)
• 10591-108D6 (testicular germ cell embryonal carcinoma cell line:NEC14)
• 10593-108D8 (testicular germ cell embryonal carcinoma cell line:NEC15)
• 10786-110H3 (testicular germ cell embryonal carcinoma cell line:ITO-II)
• 11255-116F4 (Sertoli Cells, donor1)
• 11333-117F1 (Sertoli Cells, donor2)
• 1300-22B7 (testis, neonate N00)

... further results Mouse (Mus musculus)

• 10026-101D8 (testis, adult, pool1)
• 10096-102C6 (testis, adult, pool2)
• 10201-103F3 (seminal vesicle, adult)
• 10590-108D5 (testicular germ cell embryonal carcinoma cell line:NEC8)
• 10591-108D6 (testicular germ cell embryonal carcinoma cell line:NEC14)
• 10593-108D8 (testicular germ cell embryonal carcinoma cell line:NEC15)
• 10786-110H3 (testicular germ cell embryonal carcinoma cell line:ITO-II)
• 11255-116F4 (Sertoli Cells, donor1)
• 11333-117F1 (Sertoli Cells, donor2)
• 1300-22B7 (testis, neonate N00)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000473 (testis), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
8.98e-147	FFCP PHASE2:Hg19::chr1:44584485..44584512,+	p2@KLF17
8.98e-147	FFCP PHASE1:Hg19::chr1:44584485..44584512,+	p2@KLF17
1.5e-122	FFCP PHASE2:Hg19::chr5:140053152..140053174,-	p1@DND1
1.5e-122	FFCP PHASE2:Hg19::chr1:44584530..44584537,+	p6@KLF17
1.5e-122	FFCP PHASE1:Hg19::chr1:44584530..44584537,+	p6@KLF17
1.5e-122	FFCP PHASE1:Hg19::chr5:140053152..140053174,-	p1@DND1
1.74e-110	FFCP PHASE2:Hg19::chr19:22469215..22469229,+	p2@ZNF729
1.74e-110	FFCP PHASE1:Hg19::chr19:22469215..22469229,+	p2@ZNF729
2.1e-110	FFCP PHASE2:Hg19::chr12:102133233..102133245,-	p1@SYCP3
2.1e-110	FFCP PHASE1:Hg19::chr12:102133233..102133245,-	p1@SYCP3
1.77e-102	FFCP PHASE1:Hg19::chr1:44584544..44584557,+	p4@KLF17
1.77e-102	FFCP PHASE1:Hg19::chr10:118083953..118083965,+	p1@C10orf96
1.77e-102	FFCP PHASE2:Hg19::chr10:118083953..118083965,+	p1@C10orf96
1.77e-102	FFCP PHASE2:Hg19::chr1:44584544..44584557,+	p4@KLF17
3.32e-102	FFCP PHASE2:Hg19::chr9:135232083..135232140,-	p@chr9:135232083..135232140, -
3.32e-102	FFCP PHASE1:Hg19::chr9:135232083..135232140,-	p@chr9:135232083..135232140, -
2.26e-98	FFCP PHASE1:Hg19::chr12:32717031..32717041,+	p@chr12:32717031..32717041, +
2.26e-98	FFCP PHASE2:Hg19::chr12:8045030..8045044,+	p5@NANOGP1
2.26e-98	FFCP PHASE1:Hg19::chr19:40431284..40431296,-	p@chr19:40431284..40431296, -
2.26e-98	FFCP PHASE1:Hg19::chr15:33905298..33905312,+	p@chr15:33905298..33905312, +
2.26e-98	FFCP PHASE2:Hg19::chr15:33905298..33905312,+	p@chr15:33905298..33905312, +
2.26e-98	FFCP PHASE1:Hg19::chr1:227034858..227034868,+	p@chr1:227034858..227034868, +
2.26e-98	FFCP PHASE2:Hg19::chr2:71755236..71755242,+	p@chr2:71755236..71755242, +
2.26e-98	FFCP PHASE1:Hg19::chr8:133637624..133637635,-	p5@LRRC6
2.26e-98	FFCP PHASE2:Hg19::chr1:227034858..227034868,+	p@chr1:227034858..227034868, +
2.26e-98	FFCP PHASE1:Hg19::chr16:9069001..9069012,-	p@chr16:9069001..9069012, -
2.26e-98	FFCP PHASE2:Hg19::chr12:32717043..32717051,+	p@chr12:32717043..32717051, +
2.26e-98	FFCP PHASE2:Hg19::chr11:107782394..107782402,+	p@chr11:107782394..107782402, +
2.26e-98	FFCP PHASE2:Hg19::chr19:40431284..40431296,-	p@chr19:40431284..40431296, -
2.26e-98	FFCP PHASE1:Hg19::chr7:2309320..2309348,-	p@chr7:2309320..2309348, -
2.26e-98	FFCP PHASE1:Hg19::chr2:71755221..71755234,+	p@chr2:71755221..71755234, +
2.26e-98	FFCP PHASE2:Hg19::chr1:38709054..38709062,+	p@chr1:38709054..38709062, +
2.26e-98	FFCP PHASE1:Hg19::chr2:71755206..71755213,+	p@chr2:71755206..71755213, +
2.26e-98	FFCP PHASE2:Hg19::chr2:71755206..71755213,+	p@chr2:71755206..71755213, +
2.26e-98	FFCP PHASE1:Hg19::chr11:107782394..107782402,+	p@chr11:107782394..107782402, +
2.26e-98	FFCP PHASE2:Hg19::chr2:233989556..233989568,+	p@chr2:233989556..233989568, +
2.26e-98	FFCP PHASE2:Hg19::chr8:133637624..133637635,-	p5@LRRC6
2.26e-98	FFCP PHASE2:Hg19::chr8:133637642..133637653,-	p6@LRRC6
2.26e-98	FFCP PHASE2:Hg19::chr4:779349..779383,+	p@chr4:779349..779383, +
2.26e-98	FFCP PHASE2:Hg19::chr2:71755221..71755234,+	p@chr2:71755221..71755234, +
2.26e-98	FFCP PHASE1:Hg19::chr1:92406327..92406341,+	p@chr1:92406327..92406341, +
2.26e-98	FFCP PHASE2:Hg19::chr21:27478988..27478996,-	p@chr21:27478988..27478996, -
2.26e-98	FFCP PHASE2:Hg19::chr19:46003056..46003067,+	p11@PPM1N
2.26e-98	FFCP PHASE1:Hg19::chr4:779349..779383,+	p@chr4:779349..779383, +
2.26e-98	FFCP PHASE1:Hg19::chr1:24239991..24240012,-	p6@CNR2
2.26e-98	FFCP PHASE1:Hg19::chr19:51883879..51883908,-	p@chr19:51883879..51883908, -
2.26e-98	FFCP PHASE2:Hg19::chr2:65786044..65786055,+	p@chr2:65786044..65786055, +
2.26e-98	FFCP PHASE1:Hg19::chr21:27478934..27478945,-	p@chr21:27478934..27478945, -
2.26e-98	FFCP PHASE1:Hg19::chr12:8045030..8045044,+	p5@NANOGP1
2.26e-98	FFCP PHASE1:Hg19::chr16:24506473..24506474,-	p2@BX538205
2.26e-98	FFCP PHASE2:Hg19::chr1:24239991..24240012,-	p6@CNR2
2.26e-98	FFCP PHASE2:Hg19::chr6:6032547..6032560,-	p@chr6:6032547..6032560, -
2.26e-98	FFCP PHASE2:Hg19::chr21:27478934..27478945,-	p@chr21:27478934..27478945, -
2.26e-98	FFCP PHASE1:Hg19::chr2:65786044..65786055,+	p@chr2:65786044..65786055, +
2.26e-98	FFCP PHASE2:Hg19::chr1:44584568..44584585,+	p3@KLF17
2.26e-98	FFCP PHASE2:Hg19::chr12:32717031..32717041,+	p@chr12:32717031..32717041, +
2.26e-98	FFCP PHASE2:Hg19::chr16:9069001..9069012,-	p@chr16:9069001..9069012, -
2.26e-98	FFCP PHASE1:Hg19::chr2:71755236..71755242,+	p@chr2:71755236..71755242, +
2.26e-98	FFCP PHASE2:Hg19::chr16:24506473..24506474,-	p2@BX538205
2.26e-98	FFCP PHASE1:Hg19::chr12:32717043..32717051,+	p@chr12:32717043..32717051, +
2.26e-98	FFCP PHASE1:Hg19::chr8:133637642..133637653,-	p6@LRRC6
2.26e-98	FFCP PHASE1:Hg19::chr1:44584568..44584585,+	p3@KLF17
2.26e-98	FFCP PHASE2:Hg19::chr1:92406327..92406341,+	p@chr1:92406327..92406341, +
2.26e-98	FFCP PHASE2:Hg19::chr19:40431300..40431312,-	p@chr19:40431300..40431312, -
2.26e-98	FFCP PHASE1:Hg19::chr1:38709054..38709062,+	p@chr1:38709054..38709062, +
2.26e-98	FFCP PHASE1:Hg19::chr2:233989556..233989568,+	p@chr2:233989556..233989568, +
2.26e-98	FFCP PHASE2:Hg19::chr19:51883856..51883866,-	p@chr19:51883856..51883866, -
2.26e-98	FFCP PHASE1:Hg19::chr21:27478988..27478996,-	p@chr21:27478988..27478996, -
2.26e-98	FFCP PHASE2:Hg19::chr7:2309320..2309348,-	p@chr7:2309320..2309348, -
2.26e-98	FFCP PHASE1:Hg19::chr19:51883856..51883866,-	p@chr19:51883856..51883866, -
2.26e-98	FFCP PHASE1:Hg19::chr19:40431300..40431312,-	p@chr19:40431300..40431312, -
2.26e-98	FFCP PHASE2:Hg19::chr19:51883915..51883934,-	p@chr19:51883915..51883934, -
2.26e-98	FFCP PHASE1:Hg19::chr19:46003056..46003067,+	p11@PPM1N
2.26e-98	FFCP PHASE1:Hg19::chr6:6032547..6032560,-	p@chr6:6032547..6032560, -
2.26e-98	FFCP PHASE1:Hg19::chr19:51883915..51883934,-	p@chr19:51883915..51883934, -
2.26e-98	FFCP PHASE2:Hg19::chr19:51883879..51883908,-	p@chr19:51883879..51883908, -
5.52e-98	FFCP PHASE1:Hg19::chr17:12125154..12125159,+	p@chr17:12125154..12125159, +
5.52e-98	FFCP PHASE2:Hg19::chr17:12125154..12125159,+	p@chr17:12125154..12125159, +
3.9e-88	FFCP PHASE1:Hg19::chr12:10183271..10183289,+	p1@CLEC9A
3.9e-88	FFCP PHASE2:Hg19::chr12:10183271..10183289,+	p1@CLEC9A
1.09e-80	FFCP PHASE1:Hg19::chr10:135043750..135043761,+	p6@UTF1
1.09e-80	FFCP PHASE2:Hg19::chr10:135043750..135043761,+	p6@UTF1
4.74e-79	FFCP PHASE1:Hg19::chrX:114524275..114524308,+	p1@LUZP4
4.74e-79	FFCP PHASE1:Hg19::chr12:8045012..8045024,+	p4@NANOGP1
4.74e-79	FFCP PHASE2:Hg19::chr3:39268574..39268596,+	p@chr3:39268574..39268596, +
4.74e-79	FFCP PHASE2:Hg19::chr1:27385778..27385789,+	p@chr1:27385778..27385789, +
4.74e-79	FFCP PHASE2:Hg19::chr4:3931902..3931913,+	p@chr4:3931902..3931913, +
4.74e-79	FFCP PHASE1:Hg19::chr3:39268574..39268596,+	p@chr3:39268574..39268596, +
4.74e-79	FFCP PHASE1:Hg19::chr12:118542383..118542415,-	p@chr12:118542383..118542415, -
4.74e-79	FFCP PHASE2:Hg19::chr19:42965112..42965160,+	p@chr19:42965112..42965160, +
4.74e-79	FFCP PHASE2:Hg19::chr11:19838901..19838948,+	p@chr11:19838901..19838948, +
4.74e-79	FFCP PHASE1:Hg19::chr11:19838901..19838948,+	p@chr11:19838901..19838948, +
4.74e-79	FFCP PHASE1:Hg19::chr5:133764015..133764029,+	p@chr5:133764015..133764029, +
4.74e-79	FFCP PHASE1:Hg19::chr7:5447185..5447197,-	p23@TNRC18
4.74e-79	FFCP PHASE1:Hg19::chr1:10476999..10477027,+	p@chr1:10476999..10477027, +
4.74e-79	FFCP PHASE2:Hg19::chr5:133764015..133764029,+	p@chr5:133764015..133764029, +
4.74e-79	FFCP PHASE1:Hg19::chr4:3931902..3931913,+	p@chr4:3931902..3931913, +
4.74e-79	FFCP PHASE2:Hg19::chr12:118542383..118542415,-	p@chr12:118542383..118542415, -
4.74e-79	FFCP PHASE1:Hg19::chr3:47297118..47297149,+	p@chr3:47297118..47297149, +
4.74e-79	FFCP PHASE2:Hg19::chr7:5447185..5447197,-	p23@TNRC18

Showing 1 to 100 of 100 entries

Property "Property value" (as page type) with input value "UBPROP:0000001 "Either of paired male reproductive organs which are involved in the production of sperm and male sex hormones.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Male reproductive organ.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.