UBERON:0000924
From FANTOM5_SSTAR
| Name: | ectoderm | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "Primary germ layer that is the outer of the embryo's three germ layers and gives rise to epidermis and neural tissue." [Wikipedia:Ectoderm] | |
| Xrefs: |
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| Synonyms: | "embryonic ectoderm" EXACT [VHOG:0000153] | |
| Alt_id: | UBERON:FBbt_00000111-FMA_69070-MIAA_0000173-XAO_0000001-ZFA_0000016 | |
| Subset: |
uberon_slim vertebrate_core |
Gray32.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000923(germ layer) |
|---|---|
| develops_from: | UBERON:0006601(presumptive ectoderm) |
Children
| develops from: | UBERON:0000007 (pituitary gland),UBERON:0000078 (mixed ectoderm/mesoderm/endoderm-derived structure),UBERON:0001016 (nervous system),UBERON:0002346 (neurectoderm),UBERON:0004121 (ectoderm-derived structure),UBERON:0004906 (ectodermal part of digestive tract),UBERON:0005497 (non-neural ectoderm),UBERON:0006268 (notochordal process),UBERON:0008425 (mammary ridge),UBERON:0010371 (ecto-epithelium),UBERON:0016879 (future central nervous system) |
|---|---|
| part of: | UBERON:0000076 (external ectoderm),CL:0000221 (ectodermal cell),UBERON:0000930 (stomodeum),UBERON:0003051 (ear vesicle),UBERON:0005085 (ectodermal placode) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000924 (ectoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Primary germ layer that is the outer of the embryonic germ layers and gives rise to epidermis and neural tissue.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
