UBERON:0000978
From FANTOM5_SSTAR
| Name: | leg | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The portion of the hindlimb that contains both the stylopod and zeugopod." [Wikipedia:Leg#Limb] | ||
| Xrefs: |
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| Synonyms: |
"lower extremity" RELATED [MESH:A.01.378.610] "tetrapod leg" EXACT [] | ||
| Comments: | The term leg can mean: [1] an appendage on which an animal walks [2] the entire hindlimb of a tetrapod [3] the segment of a human leg between knee and ankle (cf FMA) [4] the region of a hindlimb include the stylopod and zeugopod, but excluding the autopod. We define this class as [4], and thus 'leg' is compltely analagous to 'arm'. For [1], see the class 'locomotive weight-bearing appendage'. For [2] we use 'hindlimb'. For [3] we use the less open to misinterpretation 'hindlimb zeugopod'. Editor note: currently declared as overlapping foot, as AOs disagree over whether some ankle parts are in the leg or foot | ||
| Alt_id: | UBERON:FBbt_00004640-FMA_24979-MA_0000047-MIAA_0000095 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0006058(multi-limb segment region),UBERON:0008784(lower limb segment) |
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| part_of: | UBERON:0002103(hindlimb) |
Children
| part of: | UBERON:0000376 (hindlimb stylopod),UBERON:0001383 (muscle of leg),UBERON:0001465 (knee),UBERON:0003569 (leg connective tissue),UBERON:0003823 (hindlimb zeugopod),UBERON:0004174 (leg joint),UBERON:0004466 (musculature of leg),UBERON:0005893 (leg bone) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10264-104D3
- 10267-104D6
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10292-104G4 (achilles tendon, donor2)
- 10295-104G7 (cruciate ligament, donor2)
- 10310-104I4
- 10320-105A5
- 10323-105A8
- 10338-105C5
- 1350-25C3 (bone (os femoris), neonate N20)
... further results Mouse (Mus musculus)
- 10264-104D3
- 10267-104D6
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10292-104G4 (achilles tendon, donor2)
- 10295-104G7 (cruciate ligament, donor2)
- 10310-104I4
- 10320-105A5
- 10323-105A8
- 10338-105C5
- 1350-25C3 (bone (os femoris), neonate N20)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000978 (leg), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
