UBERON:0001048
From FANTOM5_SSTAR
| Name: | primordium | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "Primordia are populations of contiguous cells that are morphologically distinct and already correspond in extent to a later organ/tissue[FBbt]. An embryonic structure that is the rudiment or commencement of a part or organ." [BTO:0001886, FB:DJS, FB:FBrf0089570, FB:FBrf0178740, Wikipedia:Primordium] | |
| Xrefs: |
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| Synonyms: |
"bud" RELATED [] "placode" RELATED [FBbt:00005495] "rudiment" RELATED [] | |
| Comments: | This class was created automatically from a combination of ontologies | |
| Alt_id: | UBERON:FBbt_00005495-FMA_86589-XAO_0003043 | |
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0000468(multi-cellular organism) |
Children
| is a: | UBERON:0003084 (heart primordium),UBERON:0003091 (thyroid primordium),UBERON:0003921 (pancreas primordium),UBERON:0005085 (ectodermal placode),UBERON:0005427 (corneal primordium),UBERON:0005562 (thymus primordium),UBERON:0005564 (gonad primordium),UBERON:0005597 (lung primordium),UBERON:0005732 (limb/fin field),UBERON:0006215 (rhombic lip),UBERON:0006242 (gall bladder primordium),UBERON:0006256 (knee joint primordium),UBERON:0006293 (spleen primordium),UBERON:0007497 (developing epithelial placode),UBERON:0007689 (thyroid diverticulum),UBERON:0008801 (parotid gland primordium),UBERON:0008947 (respiratory primordium),UBERON:0010375 (pancreas dorsal primordium),UBERON:0014903 (primordial vasculature),UBERON:0017651 (salivary gland primordium) |
|---|---|
| part of: | FF:0000243 (chicken wing bud day 3 HH20) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001048 (primordium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
