UBERON:0001277

Name:	intestinal epithelium
Namespace:	FANTOM
Definition:	"Simple columnar epithelium that lines the intestine, sometimes pseudostratified, with absorptive brush-border cells and mucous goblet cells clearly visible. <a href
Xrefs:	Expandlinks: BTO:0000781 FMA:17229 MA:0001536 ncithesaurus:Intestinal_Epithelium SCTID:266135004 TAO:0005124 ZFA:0005124
Synonyms:	"bowel epithelial tissue" EXACT [OBOL:automatic] "bowel epithelium" EXACT [OBOL:automatic] "epithelial tissue of bowel" EXACT [OBOL:automatic] "epithelial tissue of intestine" EXACT [OBOL:automatic] "epithelium of bowel" EXACT [OBOL:automatic] "epithelium of intestine" EXACT [OBOL:automatic] "intestine epithelial tissue" EXACT [OBOL:automatic] "intestine epithelium" RELATED [] "villous epithelium" EXACT [ZFA:0005124]
Comments:	This class was created automatically from a combination of ontologies
Alt_id:	UBERON:FMA_17229-ZFA_0005124
Subset:	uberon_slim vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

---

Parents

is_a:	UBERON:0000485(simple columnar epithelium),UBERON:0003350(epithelium of mucosa),UBERON:0003929(gut epithelium),UBERON:0004808(gastrointestinal system epithelium)
part_of:	UBERON:0000160(intestine),UBERON:0001242(intestinal mucosa)

Children

is a:	UBERON:0001902 (epithelium of small intestine)
part of:	CL:0000510 (paneth cell),UBERON:0001213 (intestinal villus),CL:0002563 (intestinal epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

---

Human (Homo sapiens)

• 10420-106C6 (colon carcinoma cell line:COLO-320)
• 10511-107D7
• 10513-107D9 (colon carcinoma cell line:CACO-2)
• 10523-107F1
• 10557-107I8
• 10635-108I5
• 10653-109B5
• 10812-111B2 (normal intestinal epithelial cell line:FHs 74 Int)
• 11246-116E4 (Intestinal epithelial cells (polarized), donor1)
• 11848-124I3 (CD326+ enterocyte, pool1)

... further results Mouse (Mus musculus)

• 10420-106C6 (colon carcinoma cell line:COLO-320)
• 10511-107D7
• 10513-107D9 (colon carcinoma cell line:CACO-2)
• 10523-107F1
• 10557-107I8
• 10635-108I5
• 10653-109B5
• 10812-111B2 (normal intestinal epithelial cell line:FHs 74 Int)
• 11246-116E4 (Intestinal epithelial cells (polarized), donor1)
• 11848-124I3 (CD326+ enterocyte, pool1)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001277 (intestinal epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

---

Copy Excel CSV PDF

Search:

P-value	FFCP	Short description

P-value	FFCP	Short description
1.55e-98	FFCP PHASE1:Hg19::chr9:35801527..35801540,+	p@chr9:35801527..35801540, +
1.55e-98	FFCP PHASE2:Hg19::chr9:35801527..35801540,+	p@chr9:35801527..35801540, +
4.97e-77	FFCP PHASE1:Mm9::chr8:122335239..122335244,+	p@chr8:122335239..122335244, +
4.97e-77	FFCP PHASE2:Mm9::chr8:122335239..122335244,+	p@chr8:122335239..122335244, +
1.86e-71	FFCP PHASE1:Mm9::chr17:57201412..57201418,-	p@chr17:57201412..57201418, -
1.86e-71	FFCP PHASE2:Mm9::chr17:57201412..57201418,-	p@chr17:57201412..57201418, -
1.41e-68	FFCP PHASE1:Mm9::chr4:155434167..155434177,+	p@chr4:155434167..155434177, +
1.41e-68	FFCP PHASE2:Mm9::chr4:155434167..155434177,+	p@chr4:155434167..155434177, +
1.7e-67	FFCP PHASE1:Mm9::chr8:64192378..64192389,+	p@chr8:64192378..64192389, +
1.7e-67	FFCP PHASE2:Mm9::chr8:64192378..64192389,+	p@chr8:64192378..64192389, +
2.4e-66	FFCP PHASE2:Hg19::chr6:22919616..22919625,-	p@chr6:22919616..22919625, -
2.4e-66	FFCP PHASE1:Hg19::chr9:129830560..129830568,+	p@chr9:129830560..129830568, +
2.4e-66	FFCP PHASE1:Hg19::chr7:117329764..117329777,+	p1@ENST00000429014
2.4e-66	FFCP PHASE1:Hg19::chr2:127873614..127873626,+	p@chr2:127873614..127873626, +
2.4e-66	FFCP PHASE2:Hg19::chr2:127873614..127873626,+	p@chr2:127873614..127873626, +
2.4e-66	FFCP PHASE1:Hg19::chr1:111023361..111023366,+	p1@CYMP
2.4e-66	FFCP PHASE2:Hg19::chr1:111023361..111023366,+	p1@CYMP
2.4e-66	FFCP PHASE1:Hg19::chr18:7034928..7034943,-	p@chr18:7034928..7034943, -
2.4e-66	FFCP PHASE2:Hg19::chr18:7034928..7034943,-	p@chr18:7034928..7034943, -
2.4e-66	FFCP PHASE1:Hg19::chr13:46093155..46093164,+	p@chr13:46093155..46093164, +
2.4e-66	FFCP PHASE2:Hg19::chr13:46093155..46093164,+	p@chr13:46093155..46093164, +
2.4e-66	FFCP PHASE2:Hg19::chr9:129830560..129830568,+	p@chr9:129830560..129830568, +
2.4e-66	FFCP PHASE2:Hg19::chr7:117329764..117329777,+	p1@ENST00000429014
2.4e-66	FFCP PHASE1:Hg19::chr6:22919616..22919625,-	p@chr6:22919616..22919625, -
3.35e-66	FFCP PHASE1:Hg19::chr20:17691468..17691474,-	p@chr20:17691468..17691474, -
3.35e-66	FFCP PHASE2:Hg19::chr20:17691468..17691474,-	p@chr20:17691468..17691474, -
3.35e-66	FFCP PHASE2:Hg19::chrX:21849506..21849512,-	p@chrX:21849506..21849512, -
3.35e-66	FFCP PHASE1:Hg19::chr2:205409703..205409714,+	p@chr2:205409703..205409714, +
3.35e-66	FFCP PHASE2:Hg19::chr2:205409703..205409714,+	p@chr2:205409703..205409714, +
3.35e-66	FFCP PHASE1:Hg19::chr1:6420713..6420725,-	p16@ACOT7
3.35e-66	FFCP PHASE2:Hg19::chr1:6420713..6420725,-	p16@ACOT7
3.35e-66	FFCP PHASE1:Hg19::chrX:21849506..21849512,-	p@chrX:21849506..21849512, -
4.67e-66	FFCP PHASE1:Hg19::chr2:28340361..28340371,+	p@chr2:28340361..28340371, +
4.67e-66	FFCP PHASE2:Hg19::chr2:28340361..28340371,+	p@chr2:28340361..28340371, +
4.67e-66	FFCP PHASE1:Hg19::chr9:138591077..138591111,-	p@chr9:138591077..138591111, -
4.67e-66	FFCP PHASE1:Hg19::chr11:89925073..89925074,+	p@chr11:89925073..89925074, +
4.67e-66	FFCP PHASE2:Hg19::chr11:89925073..89925074,+	p@chr11:89925073..89925074, +
4.67e-66	FFCP PHASE2:Hg19::chr9:138591077..138591111,-	p@chr9:138591077..138591111, -
3.55e-65	FFCP PHASE1:Mm9::chr3:122215917..122215967,-	p@chr3:122215917..122215967, -
3.55e-65	FFCP PHASE2:Mm9::chr3:122215917..122215967,-	p@chr3:122215917..122215967, -
7.03e-65	FFCP PHASE1:Mm9::chr2:143738263..143738267,+	p@chr2:143738263..143738267, +
7.03e-65	FFCP PHASE2:Mm9::chr2:143738263..143738267,+	p@chr2:143738263..143738267, +
2.43e-61	FFCP PHASE1:Mm9::chr5:135465906..135465912,+	p@chr5:135465906..135465912, +
2.43e-61	FFCP PHASE2:Mm9::chr5:135465906..135465912,+	p@chr5:135465906..135465912, +
5.84e-61	FFCP PHASE1:Mm9::chr7:4101973..4101978,-	p4@Leng9
5.84e-61	FFCP PHASE2:Mm9::chr7:4101973..4101978,-	p4@Leng9
1.29e-60	FFCP PHASE2:Mm9::chr7:4101821..4101832,-	p5@Leng9
1.29e-60	FFCP PHASE1:Mm9::chr7:4101821..4101832,-	p5@Leng9
5.24e-58	FFCP PHASE2:Mm9::chr12:86771033..86771037,-	p@chr12:86771033..86771037, -
5.24e-58	FFCP PHASE1:Mm9::chr12:86771033..86771037,-	p@chr12:86771033..86771037, -
6.35e-57	FFCP PHASE1:Mm9::chr5:145119593..145119596,+	p@chr5:145119593..145119596, +
6.35e-57	FFCP PHASE2:Mm9::chr5:145119593..145119596,+	p@chr5:145119593..145119596, +
8.86e-57	FFCP PHASE2:Mm9::chr13:49066571..49066574,-	p@chr13:49066571..49066574, -
8.86e-57	FFCP PHASE1:Mm9::chr13:49066571..49066574,-	p@chr13:49066571..49066574, -
1.46e-56	FFCP PHASE2:Mm9::chr11:96797681..96797709,-	p@chr11:96797681..96797709, -
1.46e-56	FFCP PHASE1:Mm9::chr11:96797681..96797709,-	p@chr11:96797681..96797709, -
2.19e-56	FFCP PHASE1:Mm9::chr18:36576247..36576252,-	p@chr18:36576247..36576252, -
2.19e-56	FFCP PHASE2:Mm9::chr18:36576247..36576252,-	p@chr18:36576247..36576252, -
5.47e-56	FFCP PHASE1:Mm9::chr9:66888939..66888949,+	p@chr9:66888939..66888949, +
5.47e-56	FFCP PHASE2:Mm9::chr9:66888939..66888949,+	p@chr9:66888939..66888949, +
6.45e-56	FFCP PHASE2:Mm9::chr17:46693370..46693378,+	p@chr17:46693370..46693378, +
6.45e-56	FFCP PHASE1:Mm9::chr17:46693370..46693378,+	p@chr17:46693370..46693378, +
1.93e-53	FFCP PHASE2:Mm9::chr7:52317191..52317193,+	p@chr7:52317191..52317193, +
1.93e-53	FFCP PHASE1:Mm9::chr7:52317191..52317193,+	p@chr7:52317191..52317193, +
2.55e-53	FFCP PHASE1:Mm9::chr5:135442713..135442733,+	p@chr5:135442713..135442733, +
2.55e-53	FFCP PHASE2:Mm9::chr5:135442713..135442733,+	p@chr5:135442713..135442733, +
5.3e-53	FFCP PHASE1:Mm9::chr2:38781010..38781017,+	p@chr2:38781010..38781017, +
5.3e-53	FFCP PHASE2:Mm9::chr2:38781010..38781017,+	p@chr2:38781010..38781017, +
3.46e-52	FFCP PHASE1:Mm9::chr10:80565428..80565433,+	p@chr10:80565428..80565433, +
3.46e-52	FFCP PHASE2:Mm9::chr10:80565428..80565433,+	p@chr10:80565428..80565433, +
7.4e-52	FFCP PHASE2:Mm9::chr11:35759012..35759018,+	p@chr11:35759012..35759018, +
7.4e-52	FFCP PHASE1:Mm9::chr11:35759012..35759018,+	p@chr11:35759012..35759018, +
1.0e-51	FFCP PHASE2:Mm9::chr18:66636209..66636215,-	p@chr18:66636209..66636215, -
1.0e-51	FFCP PHASE1:Mm9::chr18:66636209..66636215,-	p@chr18:66636209..66636215, -
1.17e-51	FFCP PHASE1:Mm9::chr16:78268076..78268083,-	p@chr16:78268076..78268083, -
1.17e-51	FFCP PHASE2:Mm9::chr16:78268076..78268083,-	p@chr16:78268076..78268083, -
3.1e-50	FFCP PHASE2:Hg19::chr3:148164659..148164667,-	p@chr3:148164659..148164667, -
3.1e-50	FFCP PHASE1:Hg19::chr3:185823573..185823578,-	p26@ETV5
3.1e-50	FFCP PHASE2:Hg19::chr2:205036975..205037009,-	p@chr2:205036975..205037009, -
3.1e-50	FFCP PHASE1:Hg19::chr7:137749883..137749887,+	p@chr7:137749883..137749887, +
3.1e-50	FFCP PHASE1:Hg19::chr2:127711416..127711419,+	p@chr2:127711416..127711419, +
3.1e-50	FFCP PHASE2:Hg19::chr8:127449395..127449424,+	p@chr8:127449395..127449424, +
3.1e-50	FFCP PHASE1:Hg19::chr4:157174075..157174084,+	p@chr4:157174075..157174084, +
3.1e-50	FFCP PHASE2:Hg19::chr8:128418747..128418756,-	p@chr8:128418747..128418756, -
3.1e-50	FFCP PHASE2:Hg19::chr3:185823573..185823578,-	p26@ETV5
3.1e-50	FFCP PHASE1:Hg19::chr8:128419359..128419367,-	p@chr8:128419359..128419367, -
3.1e-50	FFCP PHASE1:Hg19::chr1:118658073..118658082,-	p@chr1:118658073..118658082, -
3.1e-50	FFCP PHASE2:Hg19::chr2:127711416..127711419,+	p@chr2:127711416..127711419, +
3.1e-50	FFCP PHASE2:Hg19::chr13:46093198..46093203,+	p@chr13:46093198..46093203, +
3.1e-50	FFCP PHASE1:Hg19::chr12:77730114..77730120,-	p@chr12:77730114..77730120, -
3.1e-50	FFCP PHASE2:Hg19::chr8:107667666..107667673,+	p@chr8:107667666..107667673, +
3.1e-50	FFCP PHASE2:Hg19::chr4:157174075..157174084,+	p@chr4:157174075..157174084, +
3.1e-50	FFCP PHASE1:Hg19::chr8:128259602..128259609,-	p@chr8:128259602..128259609, -
3.1e-50	FFCP PHASE1:Hg19::chr3:24797750..24797759,-	p@chr3:24797750..24797759, -
3.1e-50	FFCP PHASE2:Hg19::chr1:118658073..118658082,-	p@chr1:118658073..118658082, -
3.1e-50	FFCP PHASE2:Hg19::chr7:87232406..87232409,-	p@chr7:87232406..87232409, -
3.1e-50	FFCP PHASE1:Hg19::chr8:39792182..39792188,+	p14@IDO2
3.1e-50	FFCP PHASE1:Hg19::chr7:89797154..89797172,+	p9@STEAP2
3.1e-50	FFCP PHASE1:Hg19::chr8:127681013..127681042,-	p@chr8:127681013..127681042, -
3.1e-50	FFCP PHASE2:Hg19::chr7:141499716..141499722,+	p@chr7:141499716..141499722, +

Showing 1 to 100 of 100 entries

Property "Property value" (as page type) with input value "UBPROP:0000001 "Simple columnar epithelium that lines the intestine, sometimes pseudostratified, with absorptive brush-border cells and mucous goblet cells clearly visible. Crosnier et al. 2005[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.