UBERON:0002216
From FANTOM5_SSTAR
Name: | symphysis | |
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Namespace: | FANTOM | |
Definition: | "Cartilaginous joint in which the articulating bones or cartilages are connected by fibrocartilage. Examples: pubic symphysis, intervertebral symphysis, manubriosternal joint.[FMA]" [FMA:FMA, Wikipedia:Symphysis] | |
Xrefs: |
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Synonyms: | "secondary cartilaginous joint" EXACT [FMA:7498] | |
Comments: | Editors note: consider adding fibrocartilage class | |
Alt_id: | UBERON:FMA_7498-MA_0001504 | |
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002209(fibrous joint),UBERON:0002213(cartilaginous joint) |
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Children
is a: | UBERON:0001468 (intervertebral joint) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11248-116E6 (Anulus Pulposus Cell, donor1)
- 11252-116F1 (Nucleus Pulposus Cell, donor1)
- 11409-118E5 (Nucleus Pulposus Cell, donor2)
- 11462-119B4 (Nucleus Pulposus Cell, donor3)
- 11463-119B5 (Anulus Pulposus Cell, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002216 (symphysis), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data