UBERON:0002323
From FANTOM5_SSTAR
| Name: | body cavity | |
|---|---|---|
| Definition: | "fluid-filled space between epidermis and outer lining of gut cavity[WP]. In mammals it forms the peritoneal, pleural, and pericardial cavities." [Wikipedia:Body_cavity] | |
| Xrefs: |
| |
| Synonyms: |
"celom" RELATED [BTO:0001707] "coelom" EXACT [] "coelome" RELATED [BTO:0001707] "coelomic cavity" EXACT [EHDAA2:0000267] "hemocoel" RELATED [FBbt:00005060] "space of body compartment" EXACT [FMA:85006] "ventral body cavity" NARROW [] | |
| Comments: | editor note: check the FMA placement here; add developmental relationships; check EHDAA2 | |
| Alt_id: |
UBERON:0000169 UBERON:FMA_85006-MA_0002447-ZFA_0001438 | |
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002553(anatomical cavity),UBERON:0004458(body cavity or lining) |
|---|---|
| develops_from: | UBERON:0003886(body cavity precursor) |
Children
| is a: | UBERON:0001179 (peritoneal cavity),UBERON:0003684 (abdominal cavity) |
|---|---|
| part of: | UBERON:0010084 (future diaphragm) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10011-101C2 (bladder, adult, pool1)
- 10020-101D2 (ovary, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10026-101D8 (testis, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10049-101G4 (pancreas, adult, donor1)
- 10095-102C5
- 10096-102C6 (testis, adult, pool2)
- 10198-103E9 (gall bladder, adult)
- 10201-103F3 (seminal vesicle, adult)
... further results Mouse (Mus musculus)
- 10011-101C2 (bladder, adult, pool1)
- 10020-101D2 (ovary, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10026-101D8 (testis, adult, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10049-101G4 (pancreas, adult, donor1)
- 10095-102C5
- 10096-102C6 (testis, adult, pool2)
- 10198-103E9 (gall bladder, adult)
- 10201-103F3 (seminal vesicle, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002323 (body cavity), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
