UBERON:0002464

Name:	nerve trunk
Namespace:	FANTOM
Xrefs:	Expandlinks: BTO:0000927 EHDAA:4675 EMAPA:16986 FMA:5913 MA:0002408
Synonyms:	"trunk of nerve" EXACT []
Alt_id:	UBERON:MA_0002408-FMA_5913

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	UBERON:0004732(segmental subdivision of nervous system)
part_of:	UBERON:0001016(nervous system)

Children

is a:	UBERON:0000941 (cranial nerve II)
disjoint from:	UBERON:0002100 (trunk)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

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Human (Homo sapiens)

• 10277-104E7 (optic nerve, donor1)
• 10305-104H8
• 10333-105B9

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002464 (nerve trunk), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
5.42e-195	FFCP PHASE2:Hg19::chr12:57628762..57628773,-	p@chr12:57628762..57628773, -
5.42e-195	FFCP PHASE1:Hg19::chr12:57628762..57628773,-	p@chr12:57628762..57628773, -
9.37e-99	FFCP PHASE2:Hg19::chr14:105807545..105807554,+	p@chr14:105807545..105807554, +
9.37e-99	FFCP PHASE2:Hg19::chr2:60133192..60133194,-	p@chr2:60133192..60133194, -
9.37e-99	FFCP PHASE1:Hg19::chr1:62928606..62928608,+	p@chr1:62928606..62928608, +
9.37e-99	FFCP PHASE2:Hg19::chr18:25161980..25161984,-	p@chr18:25161980..25161984, -
9.37e-99	FFCP PHASE1:Hg19::chr4:127394496..127394500,-	p@chr4:127394496..127394500, -
9.37e-99	FFCP PHASE2:Hg19::chr4:127394496..127394500,-	p@chr4:127394496..127394500, -
9.37e-99	FFCP PHASE1:Hg19::chr2:188432107..188432111,+	p@chr2:188432107..188432111, +
9.37e-99	FFCP PHASE1:Hg19::chr18:74702556..74702558,-	p@chr18:74702556..74702558, -
9.37e-99	FFCP PHASE1:Hg19::chr5:151258901..151258902,+	p@chr5:151258901..151258902, +
9.37e-99	FFCP PHASE2:Hg19::chr5:151258901..151258902,+	p@chr5:151258901..151258902, +
9.37e-99	FFCP PHASE2:Hg19::chr18:74702556..74702558,-	p@chr18:74702556..74702558, -
9.37e-99	FFCP PHASE1:Hg19::chr5:149250331..149250335,-	p@chr5:149250331..149250335, -
9.37e-99	FFCP PHASE2:Hg19::chr1:62928606..62928608,+	p@chr1:62928606..62928608, +
9.37e-99	FFCP PHASE1:Hg19::chr14:105807545..105807554,+	p@chr14:105807545..105807554, +
9.37e-99	FFCP PHASE1:Hg19::chr18:25161980..25161984,-	p@chr18:25161980..25161984, -
9.37e-99	FFCP PHASE1:Hg19::chr2:60133192..60133194,-	p@chr2:60133192..60133194, -
9.37e-99	FFCP PHASE2:Hg19::chr5:149250331..149250335,-	p@chr5:149250331..149250335, -
9.37e-99	FFCP PHASE2:Hg19::chr2:188432107..188432111,+	p@chr2:188432107..188432111, +
9.37e-99	FFCP PHASE1:Hg19::chr7:15056365..15056368,-	p@chr7:15056365..15056368, -
9.37e-99	FFCP PHASE2:Hg19::chr7:15056365..15056368,-	p@chr7:15056365..15056368, -
2.55e-98	FFCP PHASE1:Hg19::chr12:296753..296755,-	p@chr12:296753..296755, -
2.55e-98	FFCP PHASE1:Hg19::chr7:73444812..73444816,+	p@chr7:73444812..73444816, +
2.55e-98	FFCP PHASE1:Hg19::chr3:27750995..27750997,-	p@chr3:27750995..27750997, -
2.55e-98	FFCP PHASE2:Hg19::chr16:66170755..66170759,-	p@chr16:66170755..66170759, -
2.55e-98	FFCP PHASE2:Hg19::chr12:78359873..78359882,+	p41@NAV3
2.55e-98	FFCP PHASE1:Hg19::chr14:85119696..85119699,+	p@chr14:85119696..85119699, +
2.55e-98	FFCP PHASE2:Hg19::chr2:21277180..21277193,+	p@chr2:21277180..21277193, +
2.55e-98	FFCP PHASE2:Hg19::chr7:73444812..73444816,+	p@chr7:73444812..73444816, +
2.55e-98	FFCP PHASE2:Hg19::chr3:27750995..27750997,-	p@chr3:27750995..27750997, -
2.55e-98	FFCP PHASE2:Hg19::chr2:29645795..29645797,+	p@chr2:29645795..29645797, +
2.55e-98	FFCP PHASE1:Hg19::chr12:72875355..72875358,+	p@chr12:72875355..72875358, +
2.55e-98	FFCP PHASE2:Hg19::chr2:192696669..192696673,+	p@chr2:192696669..192696673, +
2.55e-98	FFCP PHASE2:Hg19::chr1:203036812..203036840,+	p@chr1:203036812..203036840, +
2.55e-98	FFCP PHASE1:Hg19::chr2:30144229..30144240,-	p10@ALK
2.55e-98	FFCP PHASE2:Hg19::chr2:171939999..171940009,-	p@chr2:171939999..171940009, -
2.55e-98	FFCP PHASE1:Hg19::chr16:51174920..51174928,-	p@chr16:51174920..51174928, -
2.55e-98	FFCP PHASE1:Hg19::chr2:134472430..134472432,+	p@chr2:134472430..134472432, +
2.55e-98	FFCP PHASE2:Hg19::chr10:37679189..37679193,+	p@chr10:37679189..37679193, +
2.55e-98	FFCP PHASE1:Hg19::chr8:130597061..130597068,+	p@chr8:130597061..130597068, +
2.55e-98	FFCP PHASE1:Hg19::chr14:68589926..68589929,+	p@chr14:68589926..68589929, +
2.55e-98	FFCP PHASE2:Hg19::chr1:169073323..169073334,+	p4@ENST00000415637
2.55e-98	FFCP PHASE1:Hg19::chr5:126962527..126962529,-	p@chr5:126962527..126962529, -
2.55e-98	FFCP PHASE2:Hg19::chrX:131884370..131884375,-	p@chrX:131884370..131884375, -
2.55e-98	FFCP PHASE1:Hg19::chrX:25873187..25873209,+	p@chrX:25873187..25873209, +
2.55e-98	FFCP PHASE1:Hg19::chr1:1413227..1413230,+	p2@ATAD3B
2.55e-98	FFCP PHASE1:Hg19::chr22:30951607..30951613,-	p@chr22:30951607..30951613, -
2.55e-98	FFCP PHASE2:Hg19::chr5:126962527..126962529,-	p@chr5:126962527..126962529, -
2.55e-98	FFCP PHASE2:Hg19::chr13:64423563..64423566,+	p@chr13:64423563..64423566, +
2.55e-98	FFCP PHASE1:Hg19::chr1:218214846..218214850,-	p@chr1:218214846..218214850, -
2.55e-98	FFCP PHASE1:Hg19::chr6:16317123..16317126,+	p@chr6:16317123..16317126, +
2.55e-98	FFCP PHASE2:Hg19::chr17:47107522..47107524,+	p@chr17:47107522..47107524, +
2.55e-98	FFCP PHASE1:Hg19::chr2:133035182..133035195,-	p@chr2:133035182..133035195, -
2.55e-98	FFCP PHASE1:Hg19::chr16:70563415..70563420,+	p4@SNORD111B
2.55e-98	FFCP PHASE2:Hg19::chr6:16317123..16317126,+	p@chr6:16317123..16317126, +
2.55e-98	FFCP PHASE1:Hg19::chr5:58471631..58471634,+	p@chr5:58471631..58471634, +
2.55e-98	FFCP PHASE1:Hg19::chr15:36402459..36402465,-	p@chr15:36402459..36402465, -
2.55e-98	FFCP PHASE2:Hg19::chr3:13992334..13992338,-	p@chr3:13992334..13992338, -
2.55e-98	FFCP PHASE2:Hg19::chr5:58471631..58471634,+	p@chr5:58471631..58471634, +
2.55e-98	FFCP PHASE2:Hg19::chr14:68527802..68527806,+	p@chr14:68527802..68527806, +
2.55e-98	FFCP PHASE1:Hg19::chr4:139501766..139501798,-	p@chr4:139501766..139501798, -
2.55e-98	FFCP PHASE1:Hg19::chr10:37679189..37679193,+	p@chr10:37679189..37679193, +
2.55e-98	FFCP PHASE2:Hg19::chr1:1361494..1361497,+	p7@TMEM88B
2.55e-98	FFCP PHASE2:Hg19::chr18:39859562..39859566,+	p@chr18:39859562..39859566, +
2.55e-98	FFCP PHASE1:Hg19::chr16:66170755..66170759,-	p@chr16:66170755..66170759, -
2.55e-98	FFCP PHASE1:Hg19::chr9:79519652..79519664,-	p@chr9:79519652..79519664, -
2.55e-98	FFCP PHASE1:Hg19::chr5:24554148..24554153,+	p1@ENST00000510391
2.55e-98	FFCP PHASE1:Hg19::chr2:29484252..29484254,-	p@chr2:29484252..29484254, -
2.55e-98	FFCP PHASE2:Hg19::chr1:66713214..66713221,+	p@chr1:66713214..66713221, +
2.55e-98	FFCP PHASE2:Hg19::chr4:139501766..139501798,-	p@chr4:139501766..139501798, -
2.55e-98	FFCP PHASE1:Hg19::chr3:39827273..39827281,+	p@chr3:39827273..39827281, +
2.55e-98	FFCP PHASE2:Hg19::chr9:79519652..79519664,-	p@chr9:79519652..79519664, -
2.55e-98	FFCP PHASE2:Hg19::chr5:24554148..24554153,+	p1@ENST00000510391
2.55e-98	FFCP PHASE1:Hg19::chr12:59444098..59444102,+	p@chr12:59444098..59444102, +
2.55e-98	FFCP PHASE1:Hg19::chr14:76447439..76447452,-	p18@TGFB3
2.55e-98	FFCP PHASE2:Hg19::chr12:127992016..127992052,+	p@chr12:127992016..127992052, +
2.55e-98	FFCP PHASE1:Hg19::chr12:127992016..127992052,+	p@chr12:127992016..127992052, +
2.55e-98	FFCP PHASE2:Hg19::chr10:118927879..118927891,+	p@chr10:118927879..118927891, +
2.55e-98	FFCP PHASE2:Hg19::chr19:20382476..20382481,-	p@chr19:20382476..20382481, -
2.55e-98	FFCP PHASE2:Hg19::chr3:39827273..39827281,+	p@chr3:39827273..39827281, +
2.55e-98	FFCP PHASE1:Hg19::chr19:48479835..48479841,-	p@chr19:48479835..48479841, -
2.55e-98	FFCP PHASE1:Hg19::chr19:35978717..35978722,-	p@chr19:35978717..35978722, -
2.55e-98	FFCP PHASE1:Hg19::chr18:45498690..45498695,-	p@chr18:45498690..45498695, -
2.55e-98	FFCP PHASE1:Hg19::chr7:88535666..88535671,+	p@chr7:88535666..88535671, +
2.55e-98	FFCP PHASE1:Hg19::chr1:7709325..7709329,+	p@chr1:7709325..7709329, +
2.55e-98	FFCP PHASE2:Hg19::chr8:130597061..130597068,+	p@chr8:130597061..130597068, +
2.55e-98	FFCP PHASE1:Hg19::chr12:68567714..68567717,+	p@chr12:68567714..68567717, +
2.55e-98	FFCP PHASE2:Hg19::chr17:12935401..12935405,-	p@chr17:12935401..12935405, -
2.55e-98	FFCP PHASE1:Hg19::chr4:130221053..130221071,+	p@chr4:130221053..130221071, +
2.55e-98	FFCP PHASE1:Hg19::chr16:89970522..89970530,+	p9@TCF25
2.55e-98	FFCP PHASE2:Hg19::chr7:88535666..88535671,+	p@chr7:88535666..88535671, +
2.55e-98	FFCP PHASE2:Hg19::chr4:130221053..130221071,+	p@chr4:130221053..130221071, +
2.55e-98	FFCP PHASE2:Hg19::chr21:22483836..22483880,+	p@chr21:22483836..22483880, +
2.55e-98	FFCP PHASE1:Hg19::chr1:44991346..44991355,+	p@chr1:44991346..44991355, +
2.55e-98	FFCP PHASE2:Hg19::chr14:85119696..85119699,+	p@chr14:85119696..85119699, +
2.55e-98	FFCP PHASE1:Hg19::chr14:106176908..106176916,-	p3@BC098451
2.55e-98	FFCP PHASE1:Hg19::chr2:165170873..165170919,-	p@chr2:165170873..165170919, -
2.55e-98	FFCP PHASE1:Hg19::chr16:19586229..19586233,+	p12@C16orf62
2.55e-98	FFCP PHASE2:Hg19::chr16:51174920..51174928,-	p@chr16:51174920..51174928, -

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