UBERON:0002619
From FANTOM5_SSTAR
| Name: | regional part of cerebral cortex | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "A regional part of brain that is part of a cerebral cortex [Obol]." [OBOL:automatic] | |
| Xrefs: |
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| Synonyms: |
"cerebral cortex part" EXACT [] "region of cerebral cortex" EXACT [FMA:242193] "segment of cerebral cortex" NARROW [NIF_GrossAnatomy:birnlex_1173] | |
| Comments: | todo - check MA term | |
| Alt_id: |
UBERON:0003208 UBERON:NIF_GrossAnatomy_birnlex_1173-FMA_68603 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002791(regional part of telencephalon) |
|---|---|
| part_of: | UBERON:0000956(cerebral cortex) |
Children
| is a: | UBERON:0000411 (visual cortex),UBERON:0001950 (neocortex),UBERON:0003022 (lobe parts of cerebral cortex) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
- 10034-101E7 (parietal lobe, adult, pool1)
- 10036-101E9 (occipital pole, adult, pool1)
- 10039-101F3 (insula, adult, pool1)
- 10040-101F4 (frontal lobe, adult, pool1)
- 10071-101I8 (duodenum, fetal, donor1)
- 10072-101I9 (parietal lobe, fetal, donor1)
- 10073-102A1 (occipital lobe, fetal, donor1)
- 10076-102A4 (occipital lobe, adult, donor1)
... further results Mouse (Mus musculus)
- 10031-101E4 (temporal lobe, adult, pool1)
- 10032-101E5 (postcentral gyrus, adult, pool1)
- 10034-101E7 (parietal lobe, adult, pool1)
- 10036-101E9 (occipital pole, adult, pool1)
- 10039-101F3 (insula, adult, pool1)
- 10040-101F4 (frontal lobe, adult, pool1)
- 10071-101I8 (duodenum, fetal, donor1)
- 10072-101I9 (parietal lobe, fetal, donor1)
- 10073-102A1 (occipital lobe, fetal, donor1)
- 10076-102A4 (occipital lobe, adult, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002619 (regional part of cerebral cortex), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
