Personal tools

UBERON:0004903

From FANTOM5_SSTAR

Jump to: navigation, search

Name:bronchoalveolar duct junction
Namespace:FANTOM
Definition:"A branch point connecting the respiratory bronchioles to the alveolar ducts[MP]." [MP:0004390]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0007651(anatomical junction)
part_of:UBERON:0001004(respiratory system)



Children

derives from:FF:0102060 (bronchioalveolar carcinoma cell sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 10708-109H6 (alveolar cell carcinoma cell line:SW 1573)
  • 10709-109H7 (bronchioalveolar carcinoma cell line:NCI-H358)
  • 10715-109I4 (bronchioalveolar carcinoma cell line:NCI-H650)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004903 (bronchoalveolar duct junction), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data