UBERON:0005058

Name:	hemolymphoid system gland
Namespace:	FANTOM
Definition:	"A gland that is part of a hemolymphoid system [Obol]." [OBOL:automatic]
Xrefs:	Expandlinks: MA:0002962
Synonyms:	"hemopoietic or lymphoid gland" EXACT [GOC:cjm] "hemopoietic or lymphoid organ" BROAD [GO:0048534]
Subset:	organ_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	UBERON:0002530(gland)
part_of:	UBERON:0002193(hemolymphoid system)

Children

is a:	UBERON:0002370 (thymus)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

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Human (Homo sapiens)

• 10027-101D9 (thymus, adult, pool1)
• 10043-101F7 (thymus, fetal, pool1)
• 10097-102C7
• 10803-111A2 (thymic carcinoma cell line:Ty-82)
• 1273-19G4 (thymus, embryo E18)
• 12971-138H1 (TSt-4/DLL1 feeder cells, biol_rep1)
• 12987-138I8 (TSt-4/DLL1 feeder cells, biol_rep2)
• 13003-139B6 (TSt-4/DLL1 feeder cells, biol_rep3)
• 1362-25G7 (thymus, neonate N25)
• 1393-42G2 (thymus, neonate N30)

... further results Mouse (Mus musculus)

• 10027-101D9 (thymus, adult, pool1)
• 10043-101F7 (thymus, fetal, pool1)
• 10097-102C7
• 10803-111A2 (thymic carcinoma cell line:Ty-82)
• 1273-19G4 (thymus, embryo E18)
• 12971-138H1 (TSt-4/DLL1 feeder cells, biol_rep1)
• 12987-138I8 (TSt-4/DLL1 feeder cells, biol_rep2)
• 13003-139B6 (TSt-4/DLL1 feeder cells, biol_rep3)
• 1362-25G7 (thymus, neonate N25)
• 1393-42G2 (thymus, neonate N30)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005058 (hemolymphoid system gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
6.94e-147	FFCP PHASE2:Hg19::chr14:22928012..22928031,+	p3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1
6.94e-147	FFCP PHASE1:Hg19::chr14:22928012..22928031,+	p3@uc001wea.3, p3@uc010ajt.2, p3@uc010aju.1
8.91e-111	FFCP PHASE1:Hg19::chr14:22927984..22927999,+	p4@uc001wea.3, p4@uc010ajt.2, p4@uc010aju.1
8.91e-111	FFCP PHASE2:Hg19::chr14:22927984..22927999,+	p4@uc001wea.3, p4@uc010ajt.2, p4@uc010aju.1
1.55e-98	FFCP PHASE1:Hg19::chr2:87018900..87018905,+	p@chr2:87018900..87018905, +
1.55e-98	FFCP PHASE1:Hg19::chr15:58069758..58069762,+	p@chr15:58069758..58069762, +
1.55e-98	FFCP PHASE1:Hg19::chr11:36622593..36622605,+	p@chr11:36622593..36622605, +
1.55e-98	FFCP PHASE1:Hg19::chr12:123636839..123636885,-	p@chr12:123636839..123636885, -
1.55e-98	FFCP PHASE1:Hg19::chr1:158259849..158259854,+	p11@CD1C
1.55e-98	FFCP PHASE1:Hg19::chr1:200500161..200500173,-	p@chr1:200500161..200500173, -
1.55e-98	FFCP PHASE1:Hg19::chr1:204494413..204494420,+	p17@MDM4
1.55e-98	FFCP PHASE1:Hg19::chr11:6953654..6953661,+	p5@ZNF215
1.55e-98	FFCP PHASE1:Hg19::chr2:227771357..227771363,+	p10@RHBDD1
1.55e-98	FFCP PHASE1:Hg19::chr10:11486829..11486836,+	p@chr10:11486829..11486836, +
1.55e-98	FFCP PHASE1:Hg19::chr2:233184654..233184661,-	p@chr2:233184654..233184661, -
1.55e-98	FFCP PHASE1:Hg19::chr10:11486877..11486886,+	p@chr10:11486877..11486886, +
1.55e-98	FFCP PHASE1:Hg19::chr10:115022988..115023001,+	p@chr10:115022988..115023001, +
1.55e-98	FFCP PHASE1:Hg19::chr10:115023005..115023015,+	p@chr10:115023005..115023015, +
1.55e-98	FFCP PHASE1:Hg19::chr15:60131355..60131365,-	p@chr15:60131355..60131365, -
1.55e-98	FFCP PHASE1:Hg19::chr16:74359040..74359071,+	p@chr16:74359040..74359071, +
1.55e-98	FFCP PHASE1:Hg19::chr10:115023055..115023072,+	p@chr10:115023055..115023072, +
1.55e-98	FFCP PHASE1:Hg19::chr10:115023094..115023106,+	p@chr10:115023094..115023106, +
1.55e-98	FFCP PHASE1:Hg19::chr17:76274572..76274581,-	p4@ENST00000374945
1.55e-98	FFCP PHASE1:Hg19::chr12:48227243..48227269,+	p@chr12:48227243..48227269, +
1.55e-98	FFCP PHASE1:Hg19::chr3:155273127..155273136,-	p4@AK093601
1.55e-98	FFCP PHASE1:Hg19::chr12:123634449..123634460,-	p25@PITPNM2
1.55e-98	FFCP PHASE1:Hg19::chr2:87018380..87018390,-	p6@CD8A
1.55e-98	FFCP PHASE1:Hg19::chr3:34517538..34517551,+	p@chr3:34517538..34517551, +
1.55e-98	FFCP PHASE1:Hg19::chr11:36589389..36589398,-	p@chr11:36589389..36589398, -
1.55e-98	FFCP PHASE1:Hg19::chr17:80866179..80866188,+	p@chr17:80866179..80866188, +
1.55e-98	FFCP PHASE1:Hg19::chr1:204507243..204507252,+	p19@MDM4
1.55e-98	FFCP PHASE1:Hg19::chr15:56940722..56940731,+	p@chr15:56940722..56940731, +
1.55e-98	FFCP PHASE1:Hg19::chr15:58069384..58069408,+	p@chr15:58069384..58069408, +
1.55e-98	FFCP PHASE1:Hg19::chr1:158226030..158226041,+	p@chr1:158226030..158226041, +
1.55e-98	FFCP PHASE1:Hg19::chr3:35683004..35683015,+	p42@ARPP21
1.55e-98	FFCP PHASE1:Hg19::chr1:204494427..204494436,+	p15@MDM4
1.55e-98	FFCP PHASE1:Hg19::chr1:2084380..2084413,-	p@chr1:2084380..2084413, -
1.55e-98	FFCP PHASE1:Hg19::chr1:158170478..158170491,-	p@chr1:158170478..158170491, -
1.55e-98	FFCP PHASE1:Hg19::chr12:133414662..133414671,-	p@chr12:133414662..133414671, -
1.55e-98	FFCP PHASE1:Hg19::chr20:58830826..58830835,+	p@chr20:58830826..58830835, +
1.55e-98	FFCP PHASE1:Hg19::chr2:233102726..233102734,+	p@chr2:233102726..233102734, +
1.55e-98	FFCP PHASE1:Hg19::chr15:57017749..57017755,-	p@chr15:57017749..57017755, -
1.55e-98	FFCP PHASE1:Hg19::chr1:44035233..44035242,+	p@chr1:44035233..44035242, +
1.55e-98	FFCP PHASE1:Hg19::chr10:26726728..26726731,+	p17@APBB1IP
1.55e-98	FFCP PHASE1:Hg19::chr20:30272266..30272271,-	p@chr20:30272266..30272271, -
1.55e-98	FFCP PHASE1:Hg19::chr20:58830799..58830808,+	p@chr20:58830799..58830808, +
1.55e-98	FFCP PHASE1:Hg19::chr18:13437980..13437986,+	p@chr18:13437980..13437986, +
1.55e-98	FFCP PHASE1:Hg19::chr12:47205180..47205187,+	p@chr12:47205180..47205187, +
1.55e-98	FFCP PHASE1:Hg19::chr2:87017428..87017437,+	p@chr2:87017428..87017437, +
1.55e-98	FFCP PHASE1:Hg19::chr2:57846504..57846542,+	p@chr2:57846504..57846542, +
1.55e-98	FFCP PHASE1:Hg19::chr12:123607146..123607168,-	p@chr12:123607146..123607168, -
1.55e-98	FFCP PHASE1:Hg19::chr1:199026759..199026762,+	p@chr1:199026759..199026762, +
1.55e-98	FFCP PHASE1:Hg19::chr1:158332631..158332640,+	p@chr1:158332631..158332640, +
1.55e-98	FFCP PHASE1:Hg19::chr13:99628369..99628374,-	p@chr13:99628369..99628374, -
1.55e-98	FFCP PHASE1:Hg19::chr3:34517741..34517784,+	p@chr3:34517741..34517784, +
1.55e-98	FFCP PHASE1:Hg19::chr12:123559773..123559784,-	p@chr12:123559773..123559784, -
1.55e-98	FFCP PHASE1:Hg19::chr1:158260453..158260459,-	p@chr1:158260453..158260459, -
1.55e-98	FFCP PHASE1:Hg19::chr15:60131313..60131324,-	p@chr15:60131313..60131324, -
1.55e-98	FFCP PHASE1:Hg19::chr12:123559708..123559720,-	p@chr12:123559708..123559720, -
1.55e-98	FFCP PHASE1:Hg19::chr15:99071828..99071840,+	p@chr15:99071828..99071840, +
1.55e-98	FFCP PHASE1:Hg19::chr1:160643269..160643276,+	p5@ENST00000443928
1.55e-98	FFCP PHASE1:Hg19::chr12:59432175..59432191,+	p@chr12:59432175..59432191, +
1.55e-98	FFCP PHASE1:Hg19::chr1:158260649..158260652,+	p13@CD1C
1.55e-98	FFCP PHASE1:Hg19::chr15:60131337..60131352,-	p@chr15:60131337..60131352, -
1.55e-98	FFCP PHASE1:Hg19::chr14:98229095..98229108,-	p1@ENST00000555187
1.55e-98	FFCP PHASE1:Hg19::chr15:56940732..56940741,+	p@chr15:56940732..56940741, +
1.55e-98	FFCP PHASE1:Hg19::chr14:22942319..22942322,+	p4@uc001wec.2
1.55e-98	FFCP PHASE1:Hg19::chr3:19007717..19007728,+	p@chr3:19007717..19007728, +
1.55e-98	FFCP PHASE1:Hg19::chr13:99628347..99628352,-	p@chr13:99628347..99628352, -
1.55e-98	FFCP PHASE1:Hg19::chr2:57926329..57926337,-	p@chr2:57926329..57926337, -
1.55e-98	FFCP PHASE1:Hg19::chr3:35682974..35682982,+	p45@ARPP21
1.55e-98	FFCP PHASE1:Hg19::chr1:44035057..44035068,+	p@chr1:44035057..44035068, +
1.55e-98	FFCP PHASE1:Hg19::chr2:242080265..242080277,-	p20@PASK
1.55e-98	FFCP PHASE1:Hg19::chr17:4090402..4090406,-	p@chr17:4090402..4090406, -
1.55e-98	FFCP PHASE1:Hg19::chr15:58920068..58920073,-	p@chr15:58920068..58920073, -
1.55e-98	FFCP PHASE1:Hg19::chr2:227771044..227771054,+	p9@RHBDD1
1.55e-98	FFCP PHASE1:Hg19::chr12:123560793..123560802,+	p@chr12:123560793..123560802, +
1.55e-98	FFCP PHASE1:Hg19::chr13:99628323..99628332,-	p@chr13:99628323..99628332, -
1.55e-98	FFCP PHASE1:Hg19::chr12:123560608..123560615,-	p24@PITPNM2
1.55e-98	FFCP PHASE1:Hg19::chr12:133413547..133413557,-	p13@POLE
1.55e-98	FFCP PHASE1:Hg19::chr1:55776022..55776029,-	p@chr1:55776022..55776029, -
1.55e-98	FFCP PHASE1:Hg19::chr12:123627753..123627760,+	p@chr12:123627753..123627760, +
1.55e-98	FFCP PHASE1:Hg19::chr17:76274646..76274658,-	p2@ENST00000374945
1.55e-98	FFCP PHASE1:Hg19::chr2:162762361..162762364,+	p@chr2:162762361..162762364, +
1.55e-98	FFCP PHASE1:Hg19::chr20:58830811..58830825,+	p@chr20:58830811..58830825, +
1.55e-98	FFCP PHASE1:Hg19::chr15:58069582..58069594,+	p@chr15:58069582..58069594, +
1.55e-98	FFCP PHASE1:Hg19::chr10:72542272..72542281,-	p6@C10orf27
1.55e-98	FFCP PHASE1:Hg19::chr1:158301280..158301298,+	p@chr1:158301280..158301298, +
1.55e-98	FFCP PHASE1:Hg19::chr20:58833004..58833011,+	p@chr20:58833004..58833011, +
1.55e-98	FFCP PHASE1:Hg19::chr13:99628388..99628399,-	p@chr13:99628388..99628399, -
1.55e-98	FFCP PHASE1:Hg19::chr16:49633750..49633778,-	p@chr16:49633750..49633778, -
1.55e-98	FFCP PHASE1:Hg19::chr12:48225126..48225164,+	p1@ENST00000548564, p1@ENST00000550720, p1@ENST00000550909
1.55e-98	FFCP PHASE1:Hg19::chr1:194245598..194245600,-	p@chr1:194245598..194245600, -
1.55e-98	FFCP PHASE1:Hg19::chr1:160643289..160643296,+	p4@ENST00000443928
1.55e-98	FFCP PHASE1:Hg19::chr15:58069597..58069604,+	p@chr15:58069597..58069604, +
1.55e-98	FFCP PHASE1:Hg19::chr1:158303678..158303720,-	p@chr1:158303678..158303720, -
1.55e-98	FFCP PHASE1:Hg19::chr1:55776031..55776038,-	p@chr1:55776031..55776038, -
1.55e-98	FFCP PHASE1:Hg19::chr19:28877072..28877084,-	p@chr19:28877072..28877084, -
1.55e-98	FFCP PHASE1:Hg19::chr1:32314477..32314482,+	p@chr1:32314477..32314482, +
1.55e-98	FFCP PHASE1:Hg19::chr11:8954087..8954092,-	p1@AB527792

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