UBERON:0005215
From FANTOM5_SSTAR
| Name: | kidney interstitium | |
|---|---|---|
| Definition: | "The interstitium of the kidney comprises the extravascular intertubular spaces of the renal parenchyma, with their attendant cellular elements and extracellular substances. As we define it here, the interstitium is bounded on all sides by tubular and vascular basement membranes." [doi:10.1038/ki.1991.49] | |
| Xrefs: |
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| Synonyms: |
"renal interstitium" EXACT [FMA:70983] "renal stroma" EXACT [FMA:70983] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003567(abdomen connective tissue),UBERON:0005169(interstitial tissue),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0002113(kidney) |
Children
| part of: | UBERON:0002319 (mesangium),CL:1000500 (kidney interstitial cell) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11598-120H5 (Renal Mesangial Cells, donor2)
- 11679-122H5 (Renal Mesangial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005215 (kidney interstitium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
