Personal tools

UBERON:0006553

From FANTOM5_SSTAR

Jump to: navigation, search

Name:renal duct
Namespace:FANTOM
Definition:"A tube in the kidney that collect and transport urine." [ZFIN:ZDB-PUB-071029-9]
Xrefs:
links:

TAO:0005289

ZFA:0005289
Comments:in ZFA this is defined as part of mesonephros

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000058(duct),UBERON:0006555(excretory tube)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0009201 (nephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006553 (renal duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268p4@Spink12
3.28e-58FFCP PHASE1:Mm9::chr12:110131571..110131579,-#_9b3409e528ac533dfd8475c41e23287dp15@Wars
3.28e-58FFCP PHASE2:Mm9::chr7:105313229..105313234,-#_9b3409e528ac533dfd8475c41e23287dp17@Capn5
3.28e-58FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_9b3409e528ac533dfd8475c41e23287dp@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr9:35715997..35716008,+#_9b3409e528ac533dfd8475c41e23287dp1@9230113P08Rik
3.28e-58FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_9b3409e528ac533dfd8475c41e23287dp@chr16:43230846..43230884, +
3.28e-58FFCP PHASE1:Mm9::chr11:34107586..34107593,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:34107586..34107593, -
3.28e-58FFCP PHASE1:Mm9::chr10:56515486..56515496,+#_9b3409e528ac533dfd8475c41e23287dp@chr10:56515486..56515496, +
3.28e-58FFCP PHASE2:Mm9::chr2:25678985..25679033,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:25678985..25679033, +
3.28e-58FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_9b3409e528ac533dfd8475c41e23287dp@chr14:69143309..69143319, -
3.28e-58FFCP PHASE1:Mm9::chr13:21378774..21378782,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21378774..21378782, -
3.28e-58FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:75798132..75798152, -
3.28e-58FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_9b3409e528ac533dfd8475c41e23287dp@chr11:101958876..101958883, +
3.28e-58FFCP PHASE1:Mm9::chr11:96140694..96140720,+#_9b3409e528ac533dfd8475c41e23287dp@chr11:96140694..96140720, +
3.28e-58FFCP PHASE2:Mm9::chr16:22504758..22504766,-#_9b3409e528ac533dfd8475c41e23287dp@chr16:22504758..22504766, -
3.28e-58FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_9b3409e528ac533dfd8475c41e23287dp@chr9:70761931..70761971, +
3.28e-58FFCP PHASE1:Mm9::chr1:87922778..87922788,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:87922778..87922788, +
3.28e-58FFCP PHASE2:Mm9::chr14:51677141..51677148,-#_9b3409e528ac533dfd8475c41e23287dp7@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr10:116399500..116399516,+#_9b3409e528ac533dfd8475c41e23287dp@chr10:116399500..116399516, +
3.28e-58FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:50280126..50280140, +
3.28e-58FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_9b3409e528ac533dfd8475c41e23287dp4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr7:56772735..56772741,+#_9b3409e528ac533dfd8475c41e23287dp@chr7:56772735..56772741, +
3.28e-58FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_9b3409e528ac533dfd8475c41e23287dp@chr7:151928014..151928021, +
3.28e-58FFCP PHASE1:Mm9::chrX:156776465..156776473,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:156776465..156776473, -
3.28e-58FFCP PHASE1:Mm9::chr9:35651650..35651673,-#_9b3409e528ac533dfd8475c41e23287dp4@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr6:54359310..54359337,-#_9b3409e528ac533dfd8475c41e23287dp@chr6:54359310..54359337, -
3.28e-58FFCP PHASE2:Mm9::chr9:26727675..26727681,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:26727675..26727681, -
3.28e-58FFCP PHASE1:Mm9::chr2:164434157..164434162,-#_9b3409e528ac533dfd8475c41e23287dp@chr2:164434157..164434162, -
3.28e-58FFCP PHASE2:Mm9::chr2:164434157..164434162,-#_9b3409e528ac533dfd8475c41e23287dp@chr2:164434157..164434162, -
3.28e-58FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_9b3409e528ac533dfd8475c41e23287dp11@Arhgef40
3.28e-58FFCP PHASE1:Mm9::chr11:116901540..116901549,-#_9b3409e528ac533dfd8475c41e23287dp4@uc007mmw.1
3.28e-58FFCP PHASE2:Mm9::chr12:110132148..110132154,+#_9b3409e528ac533dfd8475c41e23287dp3@Wdr25
3.28e-58FFCP PHASE2:Mm9::chr14:63630486..63630493,+#_9b3409e528ac533dfd8475c41e23287dp5@Defb43
3.28e-58FFCP PHASE1:Mm9::chr1:155738967..155738974,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:155738967..155738974, +
3.28e-58FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_9b3409e528ac533dfd8475c41e23287dp@chr18:46301295..46301302, -
3.28e-58FFCP PHASE1:Mm9::chr8:126604677..126604701,-#_9b3409e528ac533dfd8475c41e23287dp@chr8:126604677..126604701, -
3.28e-58FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_9b3409e528ac533dfd8475c41e23287dp@chr1:168436322..168436326, -
3.28e-58FFCP PHASE1:Mm9::chr3:103650817..103650825,+#_9b3409e528ac533dfd8475c41e23287dp@chr3:103650817..103650825, +
3.28e-58FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_9b3409e528ac533dfd8475c41e23287dp@chr1:155697874..155697885, -
3.28e-58FFCP PHASE1:Mm9::chr2:148625223..148625234,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:148625223..148625234, +
3.28e-58FFCP PHASE1:Mm9::chr17:14306714..14306740,+#_9b3409e528ac533dfd8475c41e23287dp@chr17:14306714..14306740, +
3.28e-58FFCP PHASE1:Mm9::chr15:72756032..72756041,-#_9b3409e528ac533dfd8475c41e23287dp@chr15:72756032..72756041, -
3.28e-58FFCP PHASE1:Mm9::chr5:88272459..88272484,-#_9b3409e528ac533dfd8475c41e23287dp@chr5:88272459..88272484, -
3.28e-58FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_9b3409e528ac533dfd8475c41e23287dp@chr17:35249011..35249020, -
3.28e-58FFCP PHASE1:Mm9::chr13:21379322..21379338,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379322..21379338, -
3.28e-58FFCP PHASE1:Mm9::chr8:22061771..22061777,-#_9b3409e528ac533dfd8475c41e23287dp3@Gm6040, p3@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:130496260..130496269, -
3.28e-58FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:91107095..91107103, +
3.28e-58FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_9b3409e528ac533dfd8475c41e23287dp@chr8:107073888..107073914, -
3.28e-58FFCP PHASE2:Mm9::chr17:73221034..73221051,+#_9b3409e528ac533dfd8475c41e23287dp@chr17:73221034..73221051, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:31379972..31379981, +
3.28e-58FFCP PHASE1:Mm9::chr12:16664775..16664784,+#_9b3409e528ac533dfd8475c41e23287dp@chr12:16664775..16664784, +
3.28e-58FFCP PHASE1:Mm9::chrX:50280199..50280211,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:50280199..50280211, +
3.28e-58FFCP PHASE1:Mm9::chr11:59845404..59845416,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:59845404..59845416, -
3.28e-58FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:90155722..90155743, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379125..21379144,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379125..21379144, -
3.28e-58FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_9b3409e528ac533dfd8475c41e23287dp4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr8:19141482..19141496,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:19141482..19141496, +
3.28e-58FFCP PHASE1:Mm9::chr3:65253465..65253475,+#_9b3409e528ac533dfd8475c41e23287dp@chr3:65253465..65253475, +
3.28e-58FFCP PHASE1:Mm9::chr19:24582739..24582748,-#_9b3409e528ac533dfd8475c41e23287dp@chr19:24582739..24582748, -
3.28e-58FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_9b3409e528ac533dfd8475c41e23287dp19@Clu
3.28e-58FFCP PHASE2:Mm9::chr5:31379377..31379384,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:31379377..31379384, +
3.28e-58FFCP PHASE1:Mm9::chr12:110132148..110132154,+#_9b3409e528ac533dfd8475c41e23287dp3@Wdr25
3.28e-58FFCP PHASE2:Mm9::chr19:17591760..17591765,+#_9b3409e528ac533dfd8475c41e23287dp@chr19:17591760..17591765, +
3.28e-58FFCP PHASE1:Mm9::chr9:42151966..42151976,-#_9b3409e528ac533dfd8475c41e23287dp9@Tecta
3.28e-58FFCP PHASE1:Mm9::chr11:53938008..53938022,+#_9b3409e528ac533dfd8475c41e23287dp11@P4ha2
3.28e-58FFCP PHASE1:Mm9::chr10:61976287..61976297,-#_9b3409e528ac533dfd8475c41e23287dp@chr10:61976287..61976297, -
3.28e-58FFCP PHASE2:Mm9::chr1:89597660..89597668,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:89597660..89597668, +
3.28e-58FFCP PHASE2:Mm9::chr9:65941913..65941923,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:65941913..65941923, -
3.28e-58FFCP PHASE1:Mm9::chr5:35930706..35930717,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:35930706..35930717, +
3.28e-58FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:160573065..160573077, +
3.28e-58FFCP PHASE1:Mm9::chr13:21378871..21378901,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21378871..21378901, -
3.28e-58FFCP PHASE2:Mm9::chr16:25752183..25752203,+#_9b3409e528ac533dfd8475c41e23287dp@chr16:25752183..25752203, +
3.28e-58FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:101959282..101959299, -
3.28e-58FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:156048695..156048707, +
3.28e-58FFCP PHASE1:Mm9::chr2:152290340..152290344,-#_9b3409e528ac533dfd8475c41e23287dp2@Defb23
3.28e-58FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_9b3409e528ac533dfd8475c41e23287dp@chr16:22547027..22547063, +
3.28e-58FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_9b3409e528ac533dfd8475c41e23287dp@chr9:70779586..70779596, +
3.28e-58FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_9b3409e528ac533dfd8475c41e23287dp2@Gm6792
3.28e-58FFCP PHASE1:Mm9::chr5:110773731..110773753,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:110773731..110773753, +
3.28e-58FFCP PHASE1:Mm9::chr2:158083973..158083982,+#_9b3409e528ac533dfd8475c41e23287dp3@Bpi
3.28e-58FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_9b3409e528ac533dfd8475c41e23287dp@chr12:114385720..114385732, -
3.28e-58FFCP PHASE1:Mm9::chr14:63630486..63630493,+#_9b3409e528ac533dfd8475c41e23287dp5@Defb43
3.28e-58FFCP PHASE1:Mm9::chr10:127470322..127470326,+#_9b3409e528ac533dfd8475c41e23287dp@chr10:127470322..127470326, +
3.28e-58FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_9b3409e528ac533dfd8475c41e23287dp3@Gm3428
3.28e-58FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_9b3409e528ac533dfd8475c41e23287dp@chr6:18338054..18338077, -
3.28e-58FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:26731771..26731780, -
3.28e-58FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:192816674..192816714, +
3.28e-58FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_9b3409e528ac533dfd8475c41e23287dp@chr8:113585714..113585722, -
3.28e-58FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_9b3409e528ac533dfd8475c41e23287dp2@Rnase10
3.28e-58FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_9b3409e528ac533dfd8475c41e23287dp2@Gm6040, p2@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr11:34107562..34107572,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:34107562..34107572, -
3.28e-58FFCP PHASE1:Mm9::chrX:75798157..75798162,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:75798157..75798162, -
3.28e-58FFCP PHASE1:Mm9::chr3:107731917..107731926,-#_9b3409e528ac533dfd8475c41e23287dp@chr3:107731917..107731926, -
3.28e-58FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_9b3409e528ac533dfd8475c41e23287dp@chr1:155722142..155722175, -
3.28e-58FFCP PHASE1:Mm9::chr17:24865194..24865204,+#_9b3409e528ac533dfd8475c41e23287dp@chr17:24865194..24865204, +
3.28e-58FFCP PHASE1:Mm9::chrX:103276578..103276585,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:103276578..103276585, +
3.28e-58FFCP PHASE1:Mm9::chr9:26704579..26704582,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:26704579..26704582, -
3.28e-58FFCP PHASE1:Mm9::chr6:118298429..118298448,+#_9b3409e528ac533dfd8475c41e23287dp@chr6:118298429..118298448, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0006553&oldid=3277853"