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UBERON:0007284

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Name:presumptive neural plate
Namespace:FANTOM
Xrefs:
links:

EFO:0003424
TAO:0000063

ZFA:0000063

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0006598(presumptive structure),UBERON:0016879(future central nervous system)
develops_from:UBERON:0002346(neurectoderm)
part_of:UBERON:0004734(gastrula)



Children

develops from:UBERON:0003075 (neural plate)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007284 (presumptive neural plate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
9.11e-109FFCP PHASE2:Hg19::chr5:11588907..11588967,-#_4d17243ea0b2fc4f176613faafd17d5cp3@CTNND2
9.11e-109FFCP PHASE1:Hg19::chr5:11588907..11588967,-#_4d17243ea0b2fc4f176613faafd17d5cp3@CTNND2
3.26e-108FFCP PHASE1:Hg19::chr11:31839488..31839515,-#_de009bf76ef2ab8602f020a3fad68bd7p3@PAX6
3.26e-108FFCP PHASE2:Hg19::chr11:31839488..31839515,-#_de009bf76ef2ab8602f020a3fad68bd7p3@PAX6
7.37e-104FFCP PHASE2:Hg19::chr17:54230819..54230848,+#_e35e1385b2329f9bf45cad69177eaa66p1@ANKFN1
7.37e-104FFCP PHASE1:Hg19::chr17:54230819..54230848,+#_e35e1385b2329f9bf45cad69177eaa66p1@ANKFN1
2.38e-100FFCP PHASE1:Hg19::chr2:74612644..74612670,+#_0888b51e708e0d6c3f922182454987edp1@ENST00000412957
2.38e-100FFCP PHASE2:Hg19::chr2:74612644..74612670,+#_0888b51e708e0d6c3f922182454987edp1@ENST00000412957
3.23e-100FFCP PHASE1:Hg19::chr5:87439352..87439386,-#_50c20b0e431c3da078c411ce07de864dp@chr5:87439352..87439386, -
3.23e-100FFCP PHASE2:Hg19::chr5:87439352..87439386,-#_50c20b0e431c3da078c411ce07de864dp@chr5:87439352..87439386, -
1.2e-98FFCP PHASE1:Hg19::chr12:106976678..106976708,+#_05ce752154555b631fc208733b373e33p2@RFX4
1.2e-98FFCP PHASE2:Hg19::chr12:106976678..106976708,+#_05ce752154555b631fc208733b373e33p2@RFX4
1.54e-98FFCP PHASE1:Hg19::chr5:11384884..11384916,-#_e27f1c2e4cd7dbddd6b670832e9c06b4p8@CTNND2
1.54e-98FFCP PHASE2:Hg19::chr5:11384884..11384916,-#_e27f1c2e4cd7dbddd6b670832e9c06b4p8@CTNND2
2.06e-98FFCP PHASE1:Hg19::chr2:50201220..50201261,-#_87be61e04cc2eca508496fb5f5438406p3@NRXN1
2.06e-98FFCP PHASE2:Hg19::chr2:50201220..50201261,-#_87be61e04cc2eca508496fb5f5438406p3@NRXN1
4.02e-98FFCP PHASE1:Hg19::chr8:18541544..18541592,-#_f019ffe9a60308c397a2d5e01563336ep2@PSD3
4.02e-98FFCP PHASE2:Hg19::chr8:18541544..18541592,-#_f019ffe9a60308c397a2d5e01563336ep2@PSD3
4.6e-98FFCP PHASE2:Hg19::chr18:32398296..32398318,+#_07ec970fb75d8b419f324bcc1a53ad08p7@DTNA
4.6e-98FFCP PHASE1:Hg19::chr18:32398296..32398318,+#_07ec970fb75d8b419f324bcc1a53ad08p7@DTNA
9.29e-98FFCP PHASE1:Hg19::chr11:62475005..62475041,-#_1afb3100e228a3461579e426ddc504a1p6@BSCL2
9.29e-98FFCP PHASE2:Hg19::chr11:62475005..62475041,-#_1afb3100e228a3461579e426ddc504a1p6@BSCL2
2.26e-97FFCP PHASE1:Hg19::chr5:146314142..146314146,-#_dce1c27acd6f57a0ae390335631926e0p@chr5:146314142..146314146, -
2.26e-97FFCP PHASE2:Hg19::chr5:146314142..146314146,-#_dce1c27acd6f57a0ae390335631926e0p@chr5:146314142..146314146, -
1.06e-96FFCP PHASE2:Hg19::chr4:165305086..165305179,-#_3f984a0645bd953912690424c7517a52p2@MARCH1
1.06e-96FFCP PHASE1:Hg19::chr4:165305086..165305179,-#_3f984a0645bd953912690424c7517a52p2@MARCH1
1.15e-96FFCP PHASE2:Hg19::chr17:36760961..36760976,-#_f5be82a54923bf759724c549be08d6d3p2@SRCIN1
1.15e-96FFCP PHASE1:Hg19::chr17:36760961..36760976,-#_f5be82a54923bf759724c549be08d6d3p2@SRCIN1
1.21e-96FFCP PHASE2:Hg19::chr4:46126009..46126045,-#_def77f0111a0d5ca0f99e82cd7fe6576p1@GABRG1
1.21e-96FFCP PHASE1:Hg19::chr4:46126009..46126045,-#_def77f0111a0d5ca0f99e82cd7fe6576p1@GABRG1
2.85e-96FFCP PHASE2:Hg19::chr19:30016395..30016433,+#_ccfcfc3eb5bca6a5e47608109103d3f6p@chr19:30016395..30016433, +
2.85e-96FFCP PHASE1:Hg19::chr19:30016395..30016433,+#_ccfcfc3eb5bca6a5e47608109103d3f6p@chr19:30016395..30016433, +
4.51e-96FFCP PHASE1:Hg19::chr5:11386115..11386130,-#_0a10a81dd40312fb5c4c0ec867985decp2@CTNND2
4.51e-96FFCP PHASE2:Hg19::chr5:11386115..11386130,-#_0a10a81dd40312fb5c4c0ec867985decp2@CTNND2
7.48e-96FFCP PHASE2:Hg19::chr12:106976656..106976672,+#_aa9ccf9c4681bc9f6345d456c140dd3cp4@RFX4
7.48e-96FFCP PHASE1:Hg19::chr12:106976656..106976672,+#_aa9ccf9c4681bc9f6345d456c140dd3cp4@RFX4
7.68e-96FFCP PHASE2:Hg19::chr1:84630574..84630602,+#_418f791db29526beddb8e27375d66cc6p9@PRKACB
7.68e-96FFCP PHASE1:Hg19::chr1:84630574..84630602,+#_418f791db29526beddb8e27375d66cc6p9@PRKACB
8.2e-96FFCP PHASE2:Hg19::chr15:46702499..46702523,+#_a5d9ac81aeba2b2e1b95197e68c12871p@chr15:46702499..46702523, +
8.2e-96FFCP PHASE1:Hg19::chr15:46702499..46702523,+#_a5d9ac81aeba2b2e1b95197e68c12871p@chr15:46702499..46702523, +
8.26e-96FFCP PHASE2:Hg19::chr5:87980761..87980821,-#_e3b9b0b6cb841ea25f117d0b402258fdp4@LINC00461
8.26e-96FFCP PHASE1:Hg19::chr5:87980761..87980821,-#_e3b9b0b6cb841ea25f117d0b402258fdp4@LINC00461
9.79e-96FFCP PHASE2:Hg19::chrX:13835398..13835429,-#_e20af1c9fa49ef9ddb55453d6e6a0af2p6@GPM6B
9.79e-96FFCP PHASE1:Hg19::chrX:13835398..13835429,-#_e20af1c9fa49ef9ddb55453d6e6a0af2p6@GPM6B
1.45e-95FFCP PHASE1:Hg19::chr1:84630610..84630621,+#_1ad77db0fadfa339202c0f1aae4cdb87p17@PRKACB
1.45e-95FFCP PHASE2:Hg19::chr1:84630610..84630621,+#_1ad77db0fadfa339202c0f1aae4cdb87p17@PRKACB
1.98e-95FFCP PHASE2:Hg19::chr16:4850844..4850888,-#_298cb056a2210b10712df9a895a4464bp@chr16:4850844..4850888, -
1.98e-95FFCP PHASE1:Hg19::chr16:4850844..4850888,-#_298cb056a2210b10712df9a895a4464bp@chr16:4850844..4850888, -
2.2e-95FFCP PHASE1:Hg19::chr6:136848260..136848296,-#_ede8eff65d0cf0c5b5164bc4e165d6b6p4@MAP7
2.2e-95FFCP PHASE2:Hg19::chr6:136848260..136848296,-#_ede8eff65d0cf0c5b5164bc4e165d6b6p4@MAP7
3.63e-95FFCP PHASE2:Hg19::chr9:87283501..87283520,+#_45f396d4fdae32d412ea82a634ecb7a0p17@NTRK2
3.63e-95FFCP PHASE1:Hg19::chr9:87283501..87283520,+#_45f396d4fdae32d412ea82a634ecb7a0p17@NTRK2
3.98e-95FFCP PHASE2:Hg19::chr1:2005182..2005194,+#_54acd94e556c3a54fd66e6b9846f263ap8@PRKCZ
3.98e-95FFCP PHASE1:Hg19::chr1:2005182..2005194,+#_54acd94e556c3a54fd66e6b9846f263ap8@PRKCZ
4.64e-95FFCP PHASE1:Hg19::chr12:106976774..106976788,+#_f229911e437b308a97c44ebf4f2c5f9fp1@RFX4
4.64e-95FFCP PHASE2:Hg19::chr12:106976774..106976788,+#_f229911e437b308a97c44ebf4f2c5f9fp1@RFX4
6.45e-95FFCP PHASE1:Hg19::chr6:80131670..80131724,+#_46ec0e00ce4eb719bfbb9fc9104f6c7ap@chr6:80131670..80131724, +
6.45e-95FFCP PHASE2:Hg19::chr6:80131670..80131724,+#_46ec0e00ce4eb719bfbb9fc9104f6c7ap@chr6:80131670..80131724, +
1.07e-94FFCP PHASE1:Hg19::chr5:160279207..160279247,-#_c8b8796f1c791ae5f5d094486bba10eap1@ATP10B
1.07e-94FFCP PHASE2:Hg19::chr5:160279207..160279247,-#_c8b8796f1c791ae5f5d094486bba10eap1@ATP10B
1.15e-94FFCP PHASE2:Hg19::chr16:76311254..76311274,+#_d29838ca565c1138b6e330681f4119b0p2@CNTNAP4
1.15e-94FFCP PHASE1:Hg19::chr16:76311254..76311274,+#_d29838ca565c1138b6e330681f4119b0p2@CNTNAP4
1.24e-94FFCP PHASE1:Hg19::chr4:46126063..46126087,-#_83dace7cb7d35c1e84dde4ecffddee3ap2@GABRG1
1.24e-94FFCP PHASE2:Hg19::chr4:46126063..46126087,-#_83dace7cb7d35c1e84dde4ecffddee3ap2@GABRG1
3.41e-94FFCP PHASE2:Hg19::chr7:47420733..47420758,-#_fd63debe0f17b4293f84d5b6d3aa4828p@chr7:47420733..47420758, -
3.41e-94FFCP PHASE1:Hg19::chr7:47420733..47420758,-#_fd63debe0f17b4293f84d5b6d3aa4828p@chr7:47420733..47420758, -
3.86e-94FFCP PHASE1:Hg19::chrX:13835312..13835321,-#_ea406170a582ac6cac192fd10e2cc747p9@GPM6B
3.86e-94FFCP PHASE2:Hg19::chrX:13835312..13835321,-#_ea406170a582ac6cac192fd10e2cc747p9@GPM6B
4.07e-94FFCP PHASE2:Hg19::chr5:112074041..112074101,+#_549a406fe0e9ce15f2ed5ab979218456p4@APC
4.07e-94FFCP PHASE1:Hg19::chr2:74612614..74612643,+#_549a406fe0e9ce15f2ed5ab979218456p1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343
4.07e-94FFCP PHASE2:Hg19::chr2:74612614..74612643,+#_549a406fe0e9ce15f2ed5ab979218456p1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343
4.07e-94FFCP PHASE1:Hg19::chr5:112074041..112074101,+#_549a406fe0e9ce15f2ed5ab979218456p4@APC
1.32e-93FFCP PHASE2:Hg19::chr18:32398400..32398416,+#_9b49e22320f8e1a0d8b2c6638d6d2c8bp10@DTNA
1.32e-93FFCP PHASE1:Hg19::chr18:32398400..32398416,+#_9b49e22320f8e1a0d8b2c6638d6d2c8bp10@DTNA
1.41e-93FFCP PHASE1:Hg19::chr17:68101117..68101162,+#_8a6360b1a9a59cf73f1f74cbaa9f0235p2@KCNJ16
1.41e-93FFCP PHASE2:Hg19::chr17:68101117..68101162,+#_8a6360b1a9a59cf73f1f74cbaa9f0235p2@KCNJ16
1.62e-93FFCP PHASE2:Hg19::chr17:42989121..42989166,-#_ebac709d75e934fd1b2cef5a31860b27p7@GFAP
1.62e-93FFCP PHASE1:Hg19::chr17:42989121..42989166,-#_ebac709d75e934fd1b2cef5a31860b27p7@GFAP
1.62e-93FFCP PHASE1:Hg19::chr18:32398372..32398394,+#_ebac709d75e934fd1b2cef5a31860b27p5@DTNA
1.62e-93FFCP PHASE2:Hg19::chr18:32398372..32398394,+#_ebac709d75e934fd1b2cef5a31860b27p5@DTNA
3.0e-93FFCP PHASE1:Hg19::chr6:56716896..56716928,-#_985a216ca895d2814998af4fe427be4bp8@DST
3.0e-93FFCP PHASE2:Hg19::chr6:56716896..56716928,-#_985a216ca895d2814998af4fe427be4bp8@DST
4.29e-93FFCP PHASE1:Hg19::chr17:7558857..7558903,+#_50ded935a9e23ebc48e711c7b65cddd9p@chr17:7558857..7558903, +
4.29e-93FFCP PHASE2:Hg19::chr17:7558857..7558903,+#_50ded935a9e23ebc48e711c7b65cddd9p@chr17:7558857..7558903, +
4.3e-93FFCP PHASE1:Hg19::chr5:11384929..11384947,-#_f7167de91605635779a1493155b32f7dp15@CTNND2
4.3e-93FFCP PHASE2:Hg19::chr5:11384929..11384947,-#_f7167de91605635779a1493155b32f7dp15@CTNND2
4.84e-93FFCP PHASE1:Hg19::chr10:25940658..25940700,+#_eb32932cbe6a9ffa048ad6c26e8c0f7ep1@ENST00000450270
4.84e-93FFCP PHASE2:Hg19::chr10:25940658..25940700,+#_eb32932cbe6a9ffa048ad6c26e8c0f7ep1@ENST00000450270
5.06e-93FFCP PHASE1:Hg19::chr1:156217805..156217817,-#_bdb7182afdb5957d85f0b94deef416b3p2@PAQR6
5.06e-93FFCP PHASE2:Hg19::chr1:156217805..156217817,-#_bdb7182afdb5957d85f0b94deef416b3p2@PAQR6
5.69e-93FFCP PHASE1:Hg19::chr15:30261066..30261096,-#_8a7dab9afda25621044b8df549e4992fp12@TJP1
5.69e-93FFCP PHASE2:Hg19::chr15:30261066..30261096,-#_8a7dab9afda25621044b8df549e4992fp12@TJP1
6.08e-93FFCP PHASE2:Hg19::chr7:29519599..29519612,+#_1357df9e1005e59e2ac927f8bbb2549bp9@CHN2
6.08e-93FFCP PHASE1:Hg19::chr7:29519599..29519612,+#_1357df9e1005e59e2ac927f8bbb2549bp9@CHN2
6.68e-93FFCP PHASE1:Hg19::chr2:73286253..73286279,-#_9048d4381bd4d32224d0b49f5b937b09p3@SFXN5
6.68e-93FFCP PHASE2:Hg19::chr2:73286253..73286279,-#_9048d4381bd4d32224d0b49f5b937b09p3@SFXN5
1.1e-92FFCP PHASE2:Hg19::chr16:72459772..72459794,+#_602e9d50377331bac890e8c1454fb39bp2@uc002fch.1
1.1e-92FFCP PHASE1:Hg19::chr16:72459772..72459794,+#_602e9d50377331bac890e8c1454fb39bp2@uc002fch.1
2.68e-92FFCP PHASE1:Hg19::chr10:62149542..62149590,-#_ad0ca32f9a74476c44ed042b248e695dp1@ANK3
2.68e-92FFCP PHASE2:Hg19::chr10:62149542..62149590,-#_ad0ca32f9a74476c44ed042b248e695dp1@ANK3










Property "Property value" (as page type) with input value "UBPROP:0000001 "Region of the gastrula which gives rise to the neural plate.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.