UBERON:0000468: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0000468
|name=multi-cellular organism
|namespace=
|def="Anatomical structure that is an individual member of a species and consists of more than one ce...") |
No edit summary |
||
| Line 21: | Line 21: | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:09, 15 June 2012
| Name: | multi-cellular organism | ||
|---|---|---|---|
| Definition: | "Anatomical structure that is an individual member of a species and consists of more than one cell." [CARO:0000012, CARO:MAH, Wikipedia:Multi-cellular_organism] | ||
| Xrefs: |
| ||
| Synonyms: |
"adult mouse" EXACT [MA:0002405] "body" EXACT [] "Koerper" RELATED [BTO:0001489] "organism" EXACT [] "TS28" RELATED [MA:0002405] "whole body" EXACT [BTO:0001489] "whole organism" EXACT [] | ||
| Comments: | TODO - split body and mc organism? body continues after death stage | ||
| Alt_id: | UBERON:CARO_0000012-XAO_0003004 | ||
| Subset: |
uberon_slim upper_level |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000061(anatomical structure) |
|---|
Children
| is a: | FF:0000217 (chicken whole embryo),UBERON:0000922 (embryo),UBERON:0003100 (female organism),UBERON:0003101 (male organism),UBERON:0007023 (adult organism) |
|---|---|
| derives from: | FF:0300111 (mouse whole body sample) |
| part of: | UBERON:0000463 (organism substance),UBERON:0000467 (anatomical system),UBERON:0000475 (organism subdivision),UBERON:0000479 (tissue),UBERON:0000480 (anatomical group),UBERON:0001048 (primordium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10004-101A9 (chicken embryo whole body, day10 (HH37))
- 10010-101C1 (adipose tissue, adult, pool1)
- 10011-101C2 (bladder, adult, pool1)
- 10012-101C3 (brain, adult, pool1)
- 10013-101C4 (cervix, adult, pool1)
- 10014-101C5 (colon, adult, pool1)
- 10015-101C6 (esophagus, adult, pool1)
- 10016-101C7 (heart, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
... further results Mouse (Mus musculus)
- 10004-101A9 (chicken embryo whole body, day10 (HH37))
- 10010-101C1 (adipose tissue, adult, pool1)
- 10011-101C2 (bladder, adult, pool1)
- 10012-101C3 (brain, adult, pool1)
- 10013-101C4 (cervix, adult, pool1)
- 10014-101C5 (colon, adult, pool1)
- 10015-101C6 (esophagus, adult, pool1)
- 10016-101C7 (heart, adult, pool1)
- 10017-101C8 (kidney, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000468 (multi-cellular organism), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
