UBERON:0009145: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0009145
|name=pharyngeal region
|namespace=
|def=
|xref=EMAPA:16549;;RETIRED_EHDAA2:0001454
|is_a=UBERON:0005423
|synonym=
|comment=
|alt_id=
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|part_of=UBERON:0001041;;UBERON:0001557 | |part_of=UBERON:0001041;;UBERON:0001557 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:26, 15 June 2012
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0005423(developing anatomical structure) |
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part_of: | UBERON:0001041(foregut),UBERON:0001557(upper respiratory tract) |
Children
develops from: | UBERON:0001042 (chordate pharynx) |
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part of: | UBERON:0008814 (pharyngeal arch system) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009145 (pharyngeal region), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data