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|namespace=
|namespace=
|def="Structure in the development of the urinary and reproductive organs[WP]. endoderm-lined chamber into which the hidgut and allantois empty in early embryos[MP]." [MP:0010115, Wikipedia:Cloaca_(embryology)]
|def="Structure in the development of the urinary and reproductive organs[WP]. endoderm-lined chamber into which the hidgut and allantois empty in early embryos[MP]." [MP:0010115, Wikipedia:Cloaca_(embryology)]
|xref=EHDAA:4895;;EHDAA2:0000256;;EMAPA:27573;;EMAPA:27638
|xref=EHDAA2:0000256;;EHDAA:4895;;EMAPA:27573;;EMAPA:27638
|is_a=UBERON:0000162;;UBERON:0002050
|is_a=UBERON:0000162;;UBERON:0002050
|synonym="cloaca" RELATED SENSU []
|synonym="cloaca" RELATED SENSU []
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=UBERON:0003064
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0001353
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 16:56, 26 June 2012

Name:embryonic cloaca
Definition:"Structure in the development of the urinary and reproductive organs[WP]. endoderm-lined chamber into which the hidgut and allantois empty in early embryos[MP]." [MP:0010115, Wikipedia:Cloaca_(embryology)]
Xrefs:
links:

EHDAA2:0000256
EHDAA:4895
EMAPA:27573

EMAPA:27638
Synonyms: "cloaca" RELATED SENSU []
Comments:compare UBERON:0000162 cloaca

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000162(cloaca),UBERON:0002050(embryonic structure)



Children

part of:UBERON:0000164 (primitive urogenital sinus),UBERON:0009846 (embryonic cloacal epithelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000163 (embryonic cloaca), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data