UBERON:0002050
From FANTOM5_SSTAR
| Name: | embryonic structure | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "Anatomical structure that is part of an embryo." [BTO:0000174, ZFIN:curator] | |
| Xrefs: |
| |
| Synonyms: |
"developing embryonic structure" EXACT [FBbt:00004208] "developing structure" RELATED [] "embryonale Struktur" RELATED [BTO:0000174] "embryonic anatomical structure" EXACT [RETIRED_EHDAA2:0003169] | |
| Comments: | Note in FMA embryo is_a embryonic structure | |
| Alt_id: | UBERON:FMA_69067-XAO_0003042-ZFA_0001105 | |
| Subset: |
inconsistent_with_fma vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000061(anatomical structure),UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0000922(embryo) |
Children
| is a: | UBERON:0000087 (inner cell mass),UBERON:0000088 (trophoblast),UBERON:0000091 (bilaminar disc),UBERON:0000163 (embryonic cloaca),UBERON:0000358 (blastocyst),UBERON:0000930 (stomodeum),UBERON:0000931 (proctodeum),UBERON:0002061 (truncus arteriosus),UBERON:0002296 (dorsal mesentery),UBERON:0002532 (epiblast (generic)),UBERON:0002539 (pharyngeal arch),UBERON:0003285 (limb of embryo),UBERON:0003890 (Mullerian duct),UBERON:0004348 (optic eminence),UBERON:0004357 (paired limb/fin bud),UBERON:0004363 (pharyngeal arch artery),UBERON:0005291 (embryonic tissue),UBERON:0005432 (aortic sac),UBERON:0005498 (primitive heart tube),UBERON:0005602 (dorsal mesogastrium),UBERON:0005795 (embryonic uterus),UBERON:0006222 (future diencephalon),UBERON:0006232 (facio-acoustic VII-VIII preganglion complex),UBERON:0006256 (knee joint primordium),UBERON:0007026 (primitive gut),UBERON:0008814 (pharyngeal arch system),UBERON:0008816 (embryonic head),UBERON:0009117 (indifferent gonad),UBERON:0009142 (entire embryonic mesenchyme),UBERON:0009196 (indifferent external genitalia),UBERON:0010130 (autopod plate),UBERON:0010375 (pancreas dorsal primordium),UBERON:0011628 (early premaxilla),UBERON:0011997 (coelom),UBERON:0012292 (embryonic cloacal fold),UBERON:0013241 (embryonic urethral groove),UBERON:0014371 (future telencephalon) |
|---|---|
| disjoint from: | UBERON:0000478 (extraembryonic structure) |
| part of: | UBERON:0005291 (embryonic tissue) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10055-101H1 (uterus, fetal, donor1)
- 10233-103I8 (chicken leg buds, day03 (HH20))
- 10637-108I7 (neuroectodermal tumor cell line:FU-RPNT-1)
- 10663-109C6 (neuroectodermal tumor cell line:FU-RPNT-2)
- 10697-109G4 (peripheral neuroectodermal tumor cell line:KU-SN)
- 10774-110F9 (neuroectodermal tumor cell line:TASK1)
- 11534-120A4
- 11614-122A3
- 11695-123A3
- 11947-126B3 (Mesoderm, embryo E8.5)
... further results Mouse (Mus musculus)
- 10055-101H1 (uterus, fetal, donor1)
- 10233-103I8 (chicken leg buds, day03 (HH20))
- 10637-108I7 (neuroectodermal tumor cell line:FU-RPNT-1)
- 10663-109C6 (neuroectodermal tumor cell line:FU-RPNT-2)
- 10697-109G4 (peripheral neuroectodermal tumor cell line:KU-SN)
- 10774-110F9 (neuroectodermal tumor cell line:TASK1)
- 11534-120A4
- 11614-122A3
- 11695-123A3
- 11947-126B3 (Mesoderm, embryo E8.5)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002050 (embryonic structure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure that is part of the embryo and is comprised of portions of tissue or cells.[VSAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
