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{{UBERON
{{UBERON
|id=UBERON:0004904
|id=UBERON:0004904
|name=optic nerve
|name=nerve connecting eye with brain
|namespace=
|namespace=
|def="A nerve that connects the eye to the brain and carries the impulses formed by the retina to the visual cortex of the brain[BTO]." [BTO:0000966]
|def="A nerve that connects the eye to the brain and carries the impulses formed by the retina to the visual cortex of the brain[BTO]." [BTO:0000966]
|xref=BTO:0000966;;EV:0100351;;FBbt:00001956;;RETIRED_EHDAA2:0001314;;SCTID:180938001;;TADS:0000232
|xref=BTO:0000966;;EV:0100351;;FBbt:00001956;;TADS:0000232
|is_a=UBERON:0001785
|is_a=UBERON:0001021
|synonym="optic nerve (generic)" EXACT []
|synonym="optic nerve" BROAD [BTO:0000966];;"optic nerve (generic)" EXACT []
|comment=for the vertebrate-specific structure, see UBERON:0000941 (cranial nerve II)
|comment=for the vertebrate-specific structure, see UBERON:0000941 (cranial nerve II)
|alt_id=
|alt_id=
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|obo_creation_date=
|obo_creation_date=
|subset=grouping_class
|subset=grouping_class
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0002104
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:05, 26 June 2012

Name:nerve connecting eye with brain
Definition:"A nerve that connects the eye to the brain and carries the impulses formed by the retina to the visual cortex of the brain[BTO]." [BTO:0000966]
Xrefs:
links:

BTO:0000966
EV:0100351
FBbt:00001956

TADS:0000232
Synonyms: "optic nerve" BROAD [BTO:0000966]
"optic nerve (generic)" EXACT []
Comments:for the vertebrate-specific structure, see UBERON:0000941 (cranial nerve II)
Subset: grouping_class

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0001021(nerve)



Children

is a:UBERON:0000941 (cranial nerve II)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004904 (nerve connecting eye with brain), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data