UBERON:0003285: Difference between revisions

Latest revision as of 13:33, 27 June 2012

limb of embryo

Definition:

"A limb that is part of a embryo [Obol]." [OBOL:automatic]

Xrefs:

Synonyms:

"developmental tissue limb" EXACT [OBOL:automatic]
"embryo limb" EXACT [OBOL:automatic]
"embryonic limb" EXACT [OBOL:automatic]
"limb of developmental tissue" EXACT [OBOL:automatic]

Ontology association Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies. link to ontology dataset data

Parents

is_a:	UBERON:0002050(embryonic structure),UBERON:0002101(limb)
part_of:	UBERON:0000922(embryo)

Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples It includes FANTOM5 samples that overlay the Uberon ontology

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003285 (limb of embryo), sorted by p-values Analyst: Hideya Kawaji link to source dataset human : data mouse : data

Search:

P-value	FFCP	Short description
3.4e-49	FFCP PHASE1:Mm9::chr11:77624716..77624729,+	p26@Myo18a
3.4e-49	FFCP PHASE2:Mm9::chr11:77624716..77624729,+	p26@Myo18a
4.96e-49	FFCP PHASE2:Mm9::chr8:75097542..75097549,+	p@chr8:75097542..75097549, +
4.96e-49	FFCP PHASE1:Mm9::chr9:21934585..21934591,-	p@chr9:21934585..21934591, -
4.96e-49	FFCP PHASE2:Mm9::chr2:32482372..32482381,+	p@chr2:32482372..32482381, +
4.96e-49	FFCP PHASE2:Mm9::chr9:21934585..21934591,-	p@chr9:21934585..21934591, -
4.96e-49	FFCP PHASE1:Mm9::chr8:75097542..75097549,+	p@chr8:75097542..75097549, +
4.96e-49	FFCP PHASE1:Mm9::chr2:32482372..32482381,+	p@chr2:32482372..32482381, +
3.15e-44	FFCP PHASE2:Mm9::chr6:51525810..51525817,+	p@chr6:51525810..51525817, +
3.15e-44	FFCP PHASE1:Mm9::chr6:51525810..51525817,+	p@chr6:51525810..51525817, +
9.78e-40	FFCP PHASE2:Mm9::chr19:4876870..4876880,-	p@chr19:4876870..4876880, -
9.78e-40	FFCP PHASE1:Mm9::chr19:4876870..4876880,-	p@chr19:4876870..4876880, -
1.15e-39	FFCP PHASE1:Mm9::chr1:174140324..174140335,-	p@chr1:174140324..174140335, -
1.15e-39	FFCP PHASE2:Mm9::chr11:67063327..67063335,+	p@chr11:67063327..67063335, +
1.15e-39	FFCP PHASE1:Mm9::chr16:24096441..24096449,+	p@chr16:24096441..24096449, +
1.15e-39	FFCP PHASE1:Mm9::chr6:4490674..4490679,+	p@chr6:4490674..4490679, +
1.15e-39	FFCP PHASE2:Mm9::chr6:4490674..4490679,+	p@chr6:4490674..4490679, +
1.15e-39	FFCP PHASE1:Mm9::chr11:67063327..67063335,+	p@chr11:67063327..67063335, +
1.15e-39	FFCP PHASE2:Mm9::chr16:24096441..24096449,+	p@chr16:24096441..24096449, +
1.15e-39	FFCP PHASE2:Mm9::chr1:174140324..174140335,-	p@chr1:174140324..174140335, -
1.55e-39	FFCP PHASE2:Mm9::chr1:174143249..174143260,-	p@chr1:174143249..174143260, -
1.55e-39	FFCP PHASE1:Mm9::chr1:174143249..174143260,-	p@chr1:174143249..174143260, -
3.03e-39	FFCP PHASE1:Mm9::chr6:51525869..51525891,+	p@chr6:51525869..51525891, +
3.03e-39	FFCP PHASE2:Mm9::chr6:51525869..51525891,+	p@chr6:51525869..51525891, +
9.31e-39	FFCP PHASE2:Mm9::chr11:102130083..102130092,+	p3@Asb16
9.31e-39	FFCP PHASE1:Mm9::chr11:102130083..102130092,+	p3@Asb16
2.41e-35	FFCP PHASE2:Mm9::chr7:133604286..133604297,-	p@chr7:133604286..133604297, -
2.41e-35	FFCP PHASE1:Mm9::chr7:133604286..133604297,-	p@chr7:133604286..133604297, -
2.95e-35	FFCP PHASE2:Mm9::chr4:138365748..138365759,-	p5@Pla2g5
2.95e-35	FFCP PHASE1:Mm9::chr4:138365748..138365759,-	p5@Pla2g5
9.53e-34	FFCP PHASE2:Mm9::chr8:74049600..74049612,-	p2@uc009mdq.1
9.53e-34	FFCP PHASE1:Mm9::chr8:74049600..74049612,-	p2@uc009mdq.1
1.23e-33	FFCP PHASE1:Mm9::chr2:164773241..164773248,+	p3@Mmp9
1.23e-33	FFCP PHASE2:Mm9::chr2:164773241..164773248,+	p3@Mmp9
1.58e-33	FFCP PHASE1:Mm9::chr7:3567707..3567718,-	p2@Oscar
1.58e-33	FFCP PHASE2:Mm9::chr7:3567707..3567718,-	p2@Oscar
1.58e-33	FFCP PHASE2:Mm9::chr1:166815111..166815121,-	p@chr1:166815111..166815121, -
1.58e-33	FFCP PHASE1:Mm9::chr1:166815111..166815121,-	p@chr1:166815111..166815121, -
2.04e-33	FFCP PHASE2:Mm9::chr11:75409652..75409664,+	p@chr11:75409652..75409664, +
2.04e-33	FFCP PHASE1:Mm9::chr9:70799951..70799962,-	p4@Lipc
2.04e-33	FFCP PHASE2:Mm9::chr9:70799951..70799962,-	p4@Lipc
2.04e-33	FFCP PHASE1:Mm9::chr11:75409652..75409664,+	p@chr11:75409652..75409664, +
3.38e-33	FFCP PHASE1:Mm9::chr15:102196702..102196713,-	p6@Sp7
3.38e-33	FFCP PHASE2:Mm9::chr15:102196702..102196713,-	p6@Sp7
7.17e-33	FFCP PHASE1:Mm9::chr18:76271498..76271508,+	p@chr18:76271498..76271508, +
7.17e-33	FFCP PHASE2:Mm9::chr18:76271498..76271508,+	p@chr18:76271498..76271508, +
7.17e-33	FFCP PHASE1:Mm9::chr8:126415826..126415839,+	p@chr8:126415826..126415839, +
7.17e-33	FFCP PHASE2:Mm9::chr8:126415826..126415839,+	p@chr8:126415826..126415839, +
2.67e-30	FFCP PHASE1:Mm9::chr2:32482387..32482399,+	p@chr2:32482387..32482399, +
2.67e-30	FFCP PHASE2:Mm9::chr2:32482387..32482399,+	p@chr2:32482387..32482399, +
1.1e-29	FFCP PHASE2:Mm9::chr12:70396969..70396979,+	p@chr12:70396969..70396979, +
1.1e-29	FFCP PHASE1:Mm9::chr12:70396969..70396979,+	p@chr12:70396969..70396979, +
1.1e-29	FFCP PHASE2:Mm9::chr15:58649683..58649688,-	p@chr15:58649683..58649688, -
1.1e-29	FFCP PHASE1:Mm9::chr15:58649683..58649688,-	p@chr15:58649683..58649688, -
1.46e-29	FFCP PHASE2:Mm9::chr7:133590998..133591009,-	p@chr7:133590998..133591009, -
1.46e-29	FFCP PHASE1:Mm9::chr7:133590998..133591009,-	p@chr7:133590998..133591009, -
1.73e-29	FFCP PHASE2:Mm9::chr18:60751417..60751432,-	p2@Myoz3
1.73e-29	FFCP PHASE1:Mm9::chr18:60751417..60751432,-	p2@Myoz3
2.42e-29	FFCP PHASE2:Mm9::chr11:67051354..67051366,+	p2@Myh4
2.42e-29	FFCP PHASE1:Mm9::chr11:67051354..67051366,+	p2@Myh4
7.46e-29	FFCP PHASE2:Mm9::chr1:57155729..57155740,-	p@chr1:57155729..57155740, -
7.46e-29	FFCP PHASE1:Mm9::chr1:57155729..57155740,-	p@chr1:57155729..57155740, -
9.26e-29	FFCP PHASE2:Mm9::chr11:67056544..67056589,-	p@chr11:67056544..67056589, -
9.26e-29	FFCP PHASE2:Mm9::chr4:43597258..43597265,-	p1@Msmp
9.26e-29	FFCP PHASE1:Mm9::chr11:67056544..67056589,-	p@chr11:67056544..67056589, -
9.26e-29	FFCP PHASE1:Mm9::chr4:43597258..43597265,-	p1@Msmp
1.15e-28	FFCP PHASE2:Mm9::chrY:2858251..2858257,+	p@chrY:2858251..2858257, +
1.15e-28	FFCP PHASE2:Mm9::chr6:90552017..90552024,+	p@chr6:90552017..90552024, +
1.15e-28	FFCP PHASE1:Mm9::chr6:90552017..90552024,+	p@chr6:90552017..90552024, +
1.15e-28	FFCP PHASE1:Mm9::chrY:2858251..2858257,+	p@chrY:2858251..2858257, +
1.43e-28	FFCP PHASE2:Mm9::chr6:34436258..34436292,+	p@chr6:34436258..34436292, +
1.43e-28	FFCP PHASE1:Mm9::chr6:34436258..34436292,+	p@chr6:34436258..34436292, +
2.2e-28	FFCP PHASE2:Mm9::chr11:67069796..67069817,-	p@chr11:67069796..67069817, -
2.2e-28	FFCP PHASE1:Mm9::chr11:67069796..67069817,-	p@chr11:67069796..67069817, -
2.72e-28	FFCP PHASE2:Mm9::chr8:107702369..107702386,+	p@chr8:107702369..107702386, +
2.72e-28	FFCP PHASE1:Mm9::chr8:107702369..107702386,+	p@chr8:107702369..107702386, +
3.45e-28	FFCP PHASE1:Mm9::chr18:78254135..78254146,-	p1@Siglec15
3.45e-28	FFCP PHASE2:Mm9::chr18:78254135..78254146,-	p1@Siglec15
6.5e-28	FFCP PHASE1:Mm9::chr7:133591490..133591500,-	p6@Atp2a1
6.5e-28	FFCP PHASE2:Mm9::chr7:133591490..133591500,-	p6@Atp2a1
8.9e-28	FFCP PHASE2:Mm9::chr7:133591156..133591165,-	p7@Atp2a1
8.9e-28	FFCP PHASE1:Mm9::chr7:133591156..133591165,-	p7@Atp2a1
1.42e-27	FFCP PHASE2:Mm9::chr7:133600635..133600663,+	p@chr7:133600635..133600663, +
1.42e-27	FFCP PHASE1:Mm9::chr7:133600635..133600663,+	p@chr7:133600635..133600663, +
1.42e-27	FFCP PHASE2:Mm9::chr7:133592162..133592188,-	p@chr7:133592162..133592188, -
1.42e-27	FFCP PHASE1:Mm9::chr7:133592162..133592188,-	p@chr7:133592162..133592188, -
6.75e-27	FFCP PHASE2:Mm9::chr11:94837662..94837673,-	p4@Sgca
6.75e-27	FFCP PHASE1:Mm9::chr11:94837662..94837673,-	p4@Sgca
1.66e-26	FFCP PHASE1:Mm9::chr5:104754379..104754387,+	p1@Mepe
1.66e-26	FFCP PHASE2:Mm9::chr5:104754379..104754387,+	p1@Mepe
3.47e-26	FFCP PHASE1:Mm9::chr16:32400888..32400899,+	p2@Tm4sf19
3.47e-26	FFCP PHASE2:Mm9::chr12:81581216..81581231,+	p@chr12:81581216..81581231, +
3.47e-26	FFCP PHASE1:Mm9::chr12:81581216..81581231,+	p@chr12:81581216..81581231, +
3.47e-26	FFCP PHASE2:Mm9::chr16:32400888..32400899,+	p2@Tm4sf19
1.12e-25	FFCP PHASE2:Mm9::chr17:34176173..34176200,+	p5@Col11a2
1.12e-25	FFCP PHASE1:Mm9::chr15:97806574..97806585,-	p@chr15:97806574..97806585, -
1.12e-25	FFCP PHASE2:Mm9::chr15:97806574..97806585,-	p@chr15:97806574..97806585, -
1.12e-25	FFCP PHASE1:Mm9::chr17:34176173..34176200,+	p5@Col11a2
1.36e-25	FFCP PHASE2:Mm9::chr2:180890942..180890956,-	p@chr2:180890942..180890956, -
1.36e-25	FFCP PHASE1:Mm9::chr2:180890942..180890956,-	p@chr2:180890942..180890956, -

Showing 1 to 100 of 100 entries

@@ Line 6: / Line 6: @@
 |xref=EHDAA:1697;;EMAPA:16405
 |is_a=UBERON:0002050;;UBERON:0002101
-|synonym="developmental tissue limb" EXACT [OBOL:automatic];;"embryo limb" EXACT [OBOL:automatic];;"limb of developmental tissue" EXACT [OBOL:automatic]
+|synonym="developmental tissue limb" EXACT [OBOL:automatic];;"embryo limb" EXACT [OBOL:automatic];;"embryonic limb" EXACT [OBOL:automatic];;"limb of developmental tissue" EXACT [OBOL:automatic]
 |comment=
 |alt_id=
@@ Line 14: / Line 14: @@
 |obo_creation_date=
 |subset=
-|adjacent_to=
 |derives_from=
 |develops_from=

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UBERON:0003285: Difference between revisions

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Latest revision as of 13:33, 27 June 2012

Ontology Tree: Loaded from BioPortal

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