UBERON:0004178: Difference between revisions
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
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Revision as of 13:35, 27 June 2012
| Name: | aorta smooth muscle tissue | ||
|---|---|---|---|
| Definition: | "A portion of smooth muscle tissue that is part of an aorta [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"adult aorta involuntary muscle" EXACT [OBOL:automatic] "adult aorta non-striated muscle" EXACT [OBOL:automatic] "adult aorta smooth muscle" EXACT [OBOL:automatic] "adult aorta smooth muscle tissue" EXACT [OBOL:automatic] "aorta involuntary muscle" EXACT [OBOL:automatic] "aorta non-striated muscle" EXACT [OBOL:automatic] "aorta smooth muscle" EXACT [OBOL:automatic] "aortic smooth muscle" EXACT [BTO:0001685] "dorsal aorta involuntary muscle" EXACT [OBOL:automatic] "dorsal aorta non-striated muscle" EXACT [OBOL:automatic] "dorsal aorta smooth muscle" EXACT [OBOL:automatic] "dorsal aorta smooth muscle tissue" EXACT [OBOL:automatic] "involuntary muscle of adult aorta" EXACT [OBOL:automatic] "involuntary muscle of aorta" EXACT [OBOL:automatic] "involuntary muscle of dorsal aorta" EXACT [OBOL:automatic] "involuntary muscle of trunk of aortic tree" EXACT [OBOL:automatic] "non-striated muscle of adult aorta" EXACT [OBOL:automatic] "non-striated muscle of aorta" EXACT [OBOL:automatic] "non-striated muscle of dorsal aorta" EXACT [OBOL:automatic] "non-striated muscle of trunk of aortic tree" EXACT [OBOL:automatic] "smooth muscle of adult aorta" EXACT [OBOL:automatic] "smooth muscle of aorta" EXACT [OBOL:automatic] "smooth muscle of dorsal aorta" EXACT [OBOL:automatic] "smooth muscle of trunk of aortic tree" EXACT [OBOL:automatic] "smooth muscle tissue of adult aorta" EXACT [OBOL:automatic] "smooth muscle tissue of aorta" EXACT [OBOL:automatic] "smooth muscle tissue of dorsal aorta" EXACT [OBOL:automatic] "smooth muscle tissue of trunk of aortic tree" EXACT [OBOL:automatic] "trunk of aortic tree involuntary muscle" EXACT [OBOL:automatic] "trunk of aortic tree non-striated muscle" EXACT [OBOL:automatic] "trunk of aortic tree smooth muscle" EXACT [OBOL:automatic] "trunk of aortic tree smooth muscle tissue" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002111(artery smooth muscle tissue) |
|---|---|
| part_of: | UBERON:0000947(aorta) |
Children
| part of: | CL:0002539 (aortic smooth muscle cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11297-117B1 (Canine Aortic Smooth Muscle cells, donor1)
- 11298-117B2 (Chicken Aortic Smooth Muscle cells, donor1)
- 11299-117B3 (Mouse Aortic Smooth Muscle cells, donor1)
- 11300-117B4 (Rat Aortic Smooth Muscle cells, donor1)
- 11325-117E2 (Canine hepatocytes, donor2)
- 11360-117I1 (Smooth Muscle Cells - Aortic, donor2)
- 11374-118A6 (Canine Aortic Smooth Muscle cells, donor2)
... further results Mouse (Mus musculus)
- 11210-116A4 (Smooth Muscle Cells - Aortic, donor0)
- 11244-116E2 (Canine hepatocytes, donor1)
- 11283-116I5 (Smooth Muscle Cells - Aortic, donor1)
- 11297-117B1 (Canine Aortic Smooth Muscle cells, donor1)
- 11298-117B2 (Chicken Aortic Smooth Muscle cells, donor1)
- 11299-117B3 (Mouse Aortic Smooth Muscle cells, donor1)
- 11300-117B4 (Rat Aortic Smooth Muscle cells, donor1)
- 11325-117E2 (Canine hepatocytes, donor2)
- 11360-117I1 (Smooth Muscle Cells - Aortic, donor2)
- 11374-118A6 (Canine Aortic Smooth Muscle cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004178 (aorta smooth muscle tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_aa93aec0f787fecd4908bf412cd05595 | p@chr17:14802633..14802637, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_aa93aec0f787fecd4908bf412cd05595 | p@chr2:112043522..112043530, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_aa93aec0f787fecd4908bf412cd05595 | p@chr17:14827154..14827169, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_aa93aec0f787fecd4908bf412cd05595 | p@chr17:14802633..14802637, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_aa93aec0f787fecd4908bf412cd05595 | p@chrX:160839744..160839754, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_aa93aec0f787fecd4908bf412cd05595 | p@chr17:87574327..87574332, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_aa93aec0f787fecd4908bf412cd05595 | p@chr17:87574327..87574332, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_aa93aec0f787fecd4908bf412cd05595 | p@chr2:112043522..112043530, - |
| 1.58e-86 | FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_aa93aec0f787fecd4908bf412cd05595 | p@chr2:178190171..178190178, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_aa93aec0f787fecd4908bf412cd05595 | p@chrX:160839744..160839754, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_aa93aec0f787fecd4908bf412cd05595 | p@chr8:69228447..69228492, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_aa93aec0f787fecd4908bf412cd05595 | p5@Adamts2 |
| 1.58e-86 | FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_aa93aec0f787fecd4908bf412cd05595 | p5@Adamts2 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_aa93aec0f787fecd4908bf412cd05595 | p@chr8:69228447..69228492, + |
| 1.58e-86 | FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_aa93aec0f787fecd4908bf412cd05595 | p@chr2:178190171..178190178, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_aa93aec0f787fecd4908bf412cd05595 | p@chr17:14827154..14827169, - |
| 5.79e-79 | FFCP PHASE2:Hg19::chr1:110429102..110429103,+#_07fef3701ad04ff09089f0d1bb4396d9 | p@chr1:110429102..110429103, + |
| 5.79e-79 | FFCP PHASE1:Hg19::chr1:110429102..110429103,+#_07fef3701ad04ff09089f0d1bb4396d9 | p@chr1:110429102..110429103, + |
| 1.33e-65 | FFCP PHASE2:Mm9::chr6:128920492..128920498,-#_5fa7b6afb630343362c0a9a35f458745 | p@chr6:128920492..128920498, - |
| 1.33e-65 | FFCP PHASE2:Mm9::chrX:160840048..160840057,+#_5fa7b6afb630343362c0a9a35f458745 | p@chrX:160840048..160840057, + |
| 1.33e-65 | FFCP PHASE1:Mm9::chr6:128920492..128920498,-#_5fa7b6afb630343362c0a9a35f458745 | p@chr6:128920492..128920498, - |
| 1.33e-65 | FFCP PHASE1:Mm9::chrX:160840048..160840057,+#_5fa7b6afb630343362c0a9a35f458745 | p@chrX:160840048..160840057, + |
| 1.33e-65 | FFCP PHASE2:Mm9::chr17:71340031..71340044,-#_5fa7b6afb630343362c0a9a35f458745 | p5@Myl12b |
| 1.33e-65 | FFCP PHASE1:Mm9::chr11:118164535..118164544,-#_5fa7b6afb630343362c0a9a35f458745 | p@chr11:118164535..118164544, - |
| 1.33e-65 | FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_5fa7b6afb630343362c0a9a35f458745 | p6@Npy1r |
| 1.33e-65 | FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_5fa7b6afb630343362c0a9a35f458745 | p6@Npy1r |
| 1.33e-65 | FFCP PHASE1:Mm9::chr17:71340031..71340044,-#_5fa7b6afb630343362c0a9a35f458745 | p5@Myl12b |
| 1.33e-65 | FFCP PHASE2:Mm9::chr11:118164535..118164544,-#_5fa7b6afb630343362c0a9a35f458745 | p@chr11:118164535..118164544, - |
| 1.33e-65 | FFCP PHASE2:Mm9::chrX:160840025..160840037,+#_5fa7b6afb630343362c0a9a35f458745 | p@chrX:160840025..160840037, + |
| 1.33e-65 | FFCP PHASE1:Mm9::chrX:160840025..160840037,+#_5fa7b6afb630343362c0a9a35f458745 | p@chrX:160840025..160840037, + |
| 2.21e-65 | FFCP PHASE2:Mm9::chr4:145000183..145000220,+#_ce12a284e9b45329869df58daf326ce5 | p1@ENSMUST00000150529 |
| 2.21e-65 | FFCP PHASE1:Mm9::chr4:145000183..145000220,+#_ce12a284e9b45329869df58daf326ce5 | p1@ENSMUST00000150529 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:24251697..24251707,+#_ba7fc9b0ea508f3f424713953404d046 | p@chr14:24251697..24251707, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:96946110..96946113,+#_ba7fc9b0ea508f3f424713953404d046 | p@chr10:96946110..96946113, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:96946110..96946113,+#_ba7fc9b0ea508f3f424713953404d046 | p@chr10:96946110..96946113, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:87544959..87544962,+#_ba7fc9b0ea508f3f424713953404d046 | p@chr17:87544959..87544962, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:87544959..87544962,+#_ba7fc9b0ea508f3f424713953404d046 | p@chr17:87544959..87544962, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:78907550..78907557,+#_ba7fc9b0ea508f3f424713953404d046 | p8@Vit |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:160839012..160839023,+#_ba7fc9b0ea508f3f424713953404d046 | p@chrX:160839012..160839023, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:127573425..127573432,+#_ba7fc9b0ea508f3f424713953404d046 | p12@Gpr39 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:127573425..127573432,+#_ba7fc9b0ea508f3f424713953404d046 | p12@Gpr39 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:78907550..78907557,+#_ba7fc9b0ea508f3f424713953404d046 | p8@Vit |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:160811352..160811356,-#_ba7fc9b0ea508f3f424713953404d046 | p@chrX:160811352..160811356, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:33816181..33816195,-#_ba7fc9b0ea508f3f424713953404d046 | p@chr10:33816181..33816195, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:160811352..160811356,-#_ba7fc9b0ea508f3f424713953404d046 | p@chrX:160811352..160811356, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:160839012..160839023,+#_ba7fc9b0ea508f3f424713953404d046 | p@chrX:160839012..160839023, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:14817013..14817022,-#_ba7fc9b0ea508f3f424713953404d046 | p@chr17:14817013..14817022, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:33816181..33816195,-#_ba7fc9b0ea508f3f424713953404d046 | p@chr10:33816181..33816195, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:24251697..24251707,+#_ba7fc9b0ea508f3f424713953404d046 | p@chr14:24251697..24251707, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr17:14817013..14817022,-#_ba7fc9b0ea508f3f424713953404d046 | p@chr17:14817013..14817022, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:69857155..69857159,+#_ba7fc9b0ea508f3f424713953404d046 | p@chr8:69857155..69857159, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:69857155..69857159,+#_ba7fc9b0ea508f3f424713953404d046 | p@chr8:69857155..69857159, + |
| 1.26e-55 | FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_dd0bc68edf90278e3583c5e49bc7b333 | p@chr6:53359400..53359406, + |
| 1.26e-55 | FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_dd0bc68edf90278e3583c5e49bc7b333 | p@chr6:53359400..53359406, + |
| 4.9e-53 | FFCP PHASE1:Mm9::chr14:24251717..24251731,+#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr14:24251717..24251731, + |
| 4.9e-53 | FFCP PHASE1:Mm9::chr10:67598037..67598049,-#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr10:67598037..67598049, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_f0b5d0bb28fd4cccd49dd094fda065b1 | p5@Npy1r |
| 4.9e-53 | FFCP PHASE2:Mm9::chr14:24251717..24251731,+#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr14:24251717..24251731, + |
| 4.9e-53 | FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_f0b5d0bb28fd4cccd49dd094fda065b1 | p5@Npy1r |
| 4.9e-53 | FFCP PHASE2:Mm9::chr17:29227828..29227839,-#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr17:29227828..29227839, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr7:91081998..91082010,-#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr7:91081998..91082010, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_f0b5d0bb28fd4cccd49dd094fda065b1 | p4@Il6st |
| 4.9e-53 | FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_f0b5d0bb28fd4cccd49dd094fda065b1 | p4@Il6st |
| 4.9e-53 | FFCP PHASE2:Mm9::chr10:67598037..67598049,-#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr10:67598037..67598049, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr2:113589030..113589077,-#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr2:113589030..113589077, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr7:91081998..91082010,-#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr7:91081998..91082010, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr10:67821185..67821217,-#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr10:67821185..67821217, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr10:67821185..67821217,-#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr10:67821185..67821217, - |
| 4.9e-53 | FFCP PHASE1:Mm9::chr17:29227828..29227839,-#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr17:29227828..29227839, - |
| 4.9e-53 | FFCP PHASE2:Mm9::chr2:113589030..113589077,-#_f0b5d0bb28fd4cccd49dd094fda065b1 | p@chr2:113589030..113589077, - |
| 7.35e-53 | FFCP PHASE1:Mm9::chr4:58219542..58219545,-#_f0ad985df629d938049f7b6cc00356af | p11@Svep1 |
| 7.35e-53 | FFCP PHASE2:Mm9::chr4:58219542..58219545,-#_f0ad985df629d938049f7b6cc00356af | p11@Svep1 |
| 1.1e-52 | FFCP PHASE1:Mm9::chrX:160838787..160838800,+#_c4989d7dafde0b0eac48c0007faa963a | p@chrX:160838787..160838800, + |
| 1.1e-52 | FFCP PHASE2:Mm9::chrX:160838787..160838800,+#_c4989d7dafde0b0eac48c0007faa963a | p@chrX:160838787..160838800, + |
| 1.65e-52 | FFCP PHASE1:Mm9::chr1:137662814..137662817,+#_42cbb2861528381173248d689b6dc799 | p5@Phlda3 |
| 1.65e-52 | FFCP PHASE2:Mm9::chr1:137662814..137662817,+#_42cbb2861528381173248d689b6dc799 | p5@Phlda3 |
| 5.51e-52 | FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_af5d831710e2261ac79f4f45fc96ef4b | p@chr2:65009852..65009866, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_af5d831710e2261ac79f4f45fc96ef4b | p@chr2:65009852..65009866, - |
| 1.18e-44 | FFCP PHASE1:Mm9::chr17:14813242..14813246,-#_2ff92e5e5399d41b14c776e7cc9bb4cc | p@chr17:14813242..14813246, - |
| 1.18e-44 | FFCP PHASE1:Mm9::chr11:86417559..86417568,+#_2ff92e5e5399d41b14c776e7cc9bb4cc | p@chr11:86417559..86417568, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr2:178190136..178190151,+#_2ff92e5e5399d41b14c776e7cc9bb4cc | p@chr2:178190136..178190151, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr17:14813242..14813246,-#_2ff92e5e5399d41b14c776e7cc9bb4cc | p@chr17:14813242..14813246, - |
| 1.18e-44 | FFCP PHASE2:Mm9::chr13:119579287..119579292,+#_2ff92e5e5399d41b14c776e7cc9bb4cc | p@chr13:119579287..119579292, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chrX:160838683..160838694,+#_2ff92e5e5399d41b14c776e7cc9bb4cc | p@chrX:160838683..160838694, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr2:178190136..178190151,+#_2ff92e5e5399d41b14c776e7cc9bb4cc | p@chr2:178190136..178190151, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chrX:160838683..160838694,+#_2ff92e5e5399d41b14c776e7cc9bb4cc | p@chrX:160838683..160838694, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr13:119579287..119579292,+#_2ff92e5e5399d41b14c776e7cc9bb4cc | p@chr13:119579287..119579292, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr11:86417559..86417568,+#_2ff92e5e5399d41b14c776e7cc9bb4cc | p@chr11:86417559..86417568, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr1:127573864..127573879,+#_2ff92e5e5399d41b14c776e7cc9bb4cc | p10@Gpr39 |
| 1.18e-44 | FFCP PHASE1:Mm9::chr1:127573864..127573879,+#_2ff92e5e5399d41b14c776e7cc9bb4cc | p10@Gpr39 |
| 1.66e-44 | FFCP PHASE2:Mm9::chrX:160839663..160839673,+#_8f18220faaccb7904e6c4473c3d73447 | p@chrX:160839663..160839673, + |
| 1.66e-44 | FFCP PHASE1:Mm9::chrX:160839663..160839673,+#_8f18220faaccb7904e6c4473c3d73447 | p@chrX:160839663..160839673, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chr13:119503185..119503195,+#_8f18220faaccb7904e6c4473c3d73447 | p9@Fgf10 |
| 1.66e-44 | FFCP PHASE1:Mm9::chr13:119503185..119503195,+#_8f18220faaccb7904e6c4473c3d73447 | p9@Fgf10 |
| 2.33e-44 | FFCP PHASE2:Mm9::chr17:75790300..75790304,+#_f3e78d4b12ba66b622d1f8a092d97b14 | p@chr17:75790300..75790304, + |
| 2.33e-44 | FFCP PHASE1:Mm9::chr17:75790300..75790304,+#_f3e78d4b12ba66b622d1f8a092d97b14 | p@chr17:75790300..75790304, + |
| 3.27e-44 | FFCP PHASE2:Mm9::chr1:127573708..127573719,+#_81d8e35d33e701c13cf09966b29b183d | p9@Gpr39 |
| 3.27e-44 | FFCP PHASE1:Mm9::chr1:127573708..127573719,+#_81d8e35d33e701c13cf09966b29b183d | p9@Gpr39 |
| 4.58e-44 | FFCP PHASE1:Mm9::chr17:14813991..14813999,+#_4e7dca654e73ae4e032821fad10d943b | p@chr17:14813991..14813999, + |
| 4.58e-44 | FFCP PHASE2:Mm9::chr17:14813991..14813999,+#_4e7dca654e73ae4e032821fad10d943b | p@chr17:14813991..14813999, + |
