UBERON:0006555: Difference between revisions
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|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0001008 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:42, 27 June 2012
| Name: | excretory tube |
|---|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000025(tube),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0001008(renal system) |
Children
| is a: | UBERON:0000056 (ureter),UBERON:0000083 (mesonephric tubule),UBERON:0006553 (renal duct),UBERON:0007684 (uriniferous tubule),UBERON:0009773 (renal tubule),UBERON:0010532 (primitive nephron) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10290-104G2
- 10318-105A3
- 10346-105D4
- 11514-119H2 (Renal Glomerular Endothelial Cells, donor1)
- 11515-119H3 (Renal Proximal Tubular Epithelial Cell, donor1)
- 11516-119H4 (Renal Cortical Epithelial Cells, donor1)
- 11517-119H5 (Renal Epithelial Cells, donor1)
- 11518-119H6 (Renal Mesangial Cells, donor1)
- 11590-120G6 (Alveolar Epithelial Cells, donor2)
- 11594-120H1 (Renal Glomerular Endothelial Cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006555 (excretory tube), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.12e-98 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 7.12e-98 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_e3592ada75472de93964bc8b01718aa4 | p@chr2:693380..693398, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3b2bf352079d1a022ce1c9522b9b5110 | p4@Spink12 |
| 2.81e-78 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 2.81e-78 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_625bd56ad734e385381b843cd2fe98ca | p4@MEGF11 |
| 1.04e-71 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.04e-71 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_15c0338b883399fdbd8f506c24c999cd | p4@PAX2 |
| 1.28e-69 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 1.28e-69 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_5ac4ac0a461e2936ec059f1e2e5ba1e5 | p7@HOXA10 |
| 4.01e-67 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 4.01e-67 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_e980f55b99064a2466be6bc8d5320394 | p3@PAX2 |
| 1.1e-61 | FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 1.1e-61 | FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_87bca8656149280ac9f661fa29378448 | p@chr1:1100457..1100470, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:36016859..36016897, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52542711..52542716,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Rnase13 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:103837894..103837900,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:103837894..103837900, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597725..89597743,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:89597725..89597743, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p11@Wars |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:151927980..151927988,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:151927980..151927988, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:20817297..20817313, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:116901482..116901494,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@ENSMUST00000152401 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:16664708..16664723, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:20419453..20419476, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:160573108..160573123, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:83487114..83487124,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:83487114..83487124, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51677155..51677162,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Rnase12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378968..21378988,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378968..21378988, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379125..21379144, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302768..152302774,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Defb20 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101958876..101958883,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101958876..101958883, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:63611214..63611229,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:63611214..63611229, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379486..31379501, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141429..19141440,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141429..19141440, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25349488..25349492,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p6@Lcn12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:75798097..75798101, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:22061771..22061777,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Gm6040, p3@LOC100503992 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:160347529..160347538, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:43367743..43367754,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:43367743..43367754, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:160347529..160347538, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:96150839..96150842, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:147624258..147624285,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr6:147624258..147624285, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:34107562..34107572,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:34107562..34107572, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:110773795..110773801, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:35930667..35930691, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:46301295..46301302,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:46301295..46301302, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21378766..21378781,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21378766..21378781, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379845..31379855,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:31379845..31379855, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164499572..164499580,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Wfdc11 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:75347689..75347703,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:75347689..75347703, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:52712765..52712772,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:52712765..52712772, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:51734060..51734066,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p5@Eddm3b |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:66513886..66513897,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr5:66513886..66513897, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152302836..152302841,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p6@Defb20 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35715997..35716008,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@9230113P08Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:148445639..148445665,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:148445639..148445665, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141482..19141496,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:19141482..19141496, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:75329148..75329155,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr15:75329148..75329155, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:25752228..25752237,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:25752228..25752237, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901496..116901514,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90368977..90368987,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90368977..90368987, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:25706249..25706254, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:6204391..6204398,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Gm6792 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958887..101958896,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101958887..101958896, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152290340..152290344,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@Defb23 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:53937918..53937922,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@P4ha2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:56772735..56772741,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr7:56772735..56772741, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Glb1l2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:106730107..106730125,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:106730107..106730125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:103650758..103650778,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:103650758..103650778, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr19:17591760..17591765,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr19:17591760..17591765, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52542831..52542836,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@Rnase13 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379306..21379315,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379306..21379315, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21380670..21380678, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101959282..101959299,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:101959282..101959299, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:126591032..126591039,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr8:126591032..126591039, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:65253465..65253475,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr3:65253465..65253475, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:90155722..90155743, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr16:22547027..22547063,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr16:22547027..22547063, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:62816857..62816866,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p7@Spink10 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:106730107..106730125,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr4:106730107..106730125, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25677632..25677636,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:25677632..25677636, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:103837894..103837900,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:103837894..103837900, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:16664708..16664723,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr12:16664708..16664723, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155698166..155698174,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:155698166..155698174, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280181..50280192,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:50280181..50280192, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35651764..35651782,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p2@9230110F15Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164434346..164434353,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:164434346..164434353, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:59845376..59845393,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr11:59845376..59845393, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr9:70761931..70761971, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:74784728..74784738,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr18:74784728..74784738, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51680551..51680555,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr14:51680551..51680555, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379118..21379120,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379118..21379120, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379261..21379264,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr13:21379261..21379264, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:35651650..35651673,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p4@9230110F15Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:11079838..11079844, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152388977..152388983,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr2:152388977..152388983, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:35252614..35252635,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p3@Ly6g5b |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chrX:130496166..130496188, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87936238..87936249,+#_84c76bf0c1e0476c0a3dd256f65943d6 | p@chr1:87936238..87936249, + |
