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MacroAPE 1083:HNF4G f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;0.24019607843137272;1.612745098039215;4.906862745098041;0.24019607843137272!2;0.0;0.0;5.0784313725490176;1.921568627450983!3;1.0980392156862...")
 
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597-108E3;0.121528!10717-109I6;0.00659991!10455-106G5;0.799478!10534-107G3;0.712238!10429-106D6;0.0655525!10464-106H5;0.0291665!10827-111C8;0.0239147!10789-110H6;0.747238!10828-111C9;0.748274!10788-110H5;0.458317!10792-110H9;0.664222!10765-110E9;0.784613!10829-111D1;0.860552!10830-111D2;0.365556!10831-111D3;0.322719!10832-111D4;0.250976!10833-111D5;0.322117!10764-110E8;0.3741!10770-110F5;0.458537!10399-106A3;0.294518!10400-106A4;0.324079!10405-106A9;0.352262!10834-111D6;0.262982!10835-111D7;0.472508!10836-111D8;0.447291!10837-111D9;0.315501!10699-109G6;0.566052!10802-111A1;0.245215!10796-110I4;0.647302!10010-101C1;0.140621!10810-111A9;0.041443!10421-106C7;0.0214404!10708-109H6;0.305501!12235-129G3;0.196486!12236-129G4;0.210768!12237-129G5;0.343778!10167-103B5;0.416923!10151-102I7;0.222461!10428-106D5;0.266944!10795-110I3;0.163846!10805-111A4;0.0982401!10052-101G7;0.0217503!10189-103D9;0.246025!10589-108D4;0.1162!10425-106D2;0.817076!10427-106D4;0.052122!10702-109G9;0.342588!10432-106D9;0.720084!10496-107C1;0.946275!10718-109I7;0.14667!10011-101C2;0.540487!10053-101G8;0.201512!10686-109F2;0.484927!10084-102B3;0.358158!10012-101C3;0.722653!10085-102B4;0.4306!10482-107A5;0.117823!10419-106C5;0.501387!10080-102A8;0.364367!10760-110E4;0.107953!10709-109H7;0.872054!10710-109H8;0.703357!10703-109H1;0.887362!10719-109I8;0.00668453!10642-109A3;0.0135477!10177-103C6;1.06597e-05!10164-103B2;0.339098!10173-103C2;0.300946!10166-103B4;0.113973!10083-102B2;0.114744!10188-103D8;0.277211!10552-107I3;0.35358!10553-107I4;0.225884!10013-101C4;0.702866!10536-107G5;0.180991!10618-108G6;0.710978!10423-106C9;0.0734326!10785-110H2;0.220031!12238-129G6;0.449394!12239-129G7;0.00300944!12240-129G8;0.0972214!10416-106C2;0.00105033!10801-110I9;0.259504!10766-110F1;0.424609!10824-111C5;0.834326!10825-111C6;0.185898!10826-111C7;0.205815!10454-106G4;0.220257!10409-106B4;0.19442!10638-108I8;0.808268!10636-108I6;0.699143!10513-107D9;0.920723!10420-106C6;0.0377481!10082-102B1;0.0357442!10014-101C5;0.000136023!10070-101I7;2.8969e-06!10452-106G2;0.00468211!10453-106G3;0.0527081!10449-106F8;0.0786577!10042-101F6;0.116977!10069-101I6;0.606708!10193-103E4;0.0527947!10631-108I1;0.412596!10438-106E6;0.156159!10488-107B2;0.400334!10196-103E7;0.310478!10071-101I8;0.266197!10071-101I8;0.0194512!10041-101F5;0.0955408!10451-106G1;0.306995!10450-106F9;0.0314237!10604-108F1;0.00646524!10605-108F2;0.211652!10606-108F3;0.375594!10603-108E9;0.136513!10497-107C2;0.297963!10448-106F7;0.514253!10643-109A4;0.00996425!10426-106D3;0.87194!10431-106D8;0.767163!10197-103E8;0.150685!10443-106F2;0.0112695!10815-111B5;0.355715!10816-111B6;0.635591!10817-111B7;0.573159!10015-101C6;0.68407!10410-106B5;0.00543702!10054-101G9;0.0703139!10758-110E2;0.775932!10711-109H9;0.0793118!10040-101F4;0.072865!10470-106I2;0.231755!10415-106C1;0.484888!10198-103E9;0.908518!10614-108G2;0.0124931!10612-108F9;0.61751!10549-107H9;0.610011!10615-108G3;0.0034331!10487-107B1;0.146007!10433-106E1;0.362651!10688-109F4;0.911539!10444-106F3;0.421941!10444-106F3;0.144605!10485-107A8;0.161814!10413-106B8;0.162473!10175-103C4;0.091399!10161-103A8;0.503664!12131-128D7;0.419136!10624-108H3;0.0223826!10712-109I1;0.469228!10205-103F7;0.631943!10206-103F8;0.244285!10207-103F9;0.149906!10050-101G5;0.828087!10051-101G6;0.0130488!10016-101C7;0.0326749!10046-101G1;0.0669154!10778-110G4;0.294845!10633-108I3;0.321207!10818-111B8;0.886096!10819-111B9;0.00376977!10820-111C1;0.00521511!10484-107A7;0.00413998!10808-111A7;0.0191819!10169-103B7;0.415642!10153-102I9;0.28199!13425-144D5;0.315745!13433-144E4;0.138273!13437-144E8;0.0470066!11904-125F5;0.0666094!11905-125F6;0.185222!10039-101F3;0.176016!10791-110H8;0.252508!10017-101C8;0.708523!10045-101F9;1.77545e-06!10509-107D5;0.0192133!10839-111E2;0.179461!10692-109F8;0.00300166!10079-102A7;0.458099!10078-102A6;0.0573732!10721-110A1;0.0172847!10569-108B2;0.469085!10570-108B3;0.332122!10571-108B4;0.118109!10647-109A8;0.505675!10752-110D5;0.192838!10782-110G8;0.395512!10726-110A6;0.724068!10018-101C9;0.936529!10086-102B5;1.03116e-19!10182-103D2;3.88197e-12!10165-103B3;0.414887!10499-107C4;0.456428!10408-106B3;0.473072!10019-101D1;0.970277!10068-101I5;0.0362761!10075-102A3;0.31241!10077-102A5;0.0166515!10727-110A7;0.0323573!10775-110G1;0.279997!10412-106B7;0.573404!12231-129F8;0.503277!12232-129F9;0.828306!12233-129G1;0.377323!12234-129G2;0.269147!10414-106B9;0.458349!10170-103B8;0.0301457!10183-103D3;0.202051!10150-102I6;0.299586!10174-103C3;0.270582!10155-103A2;0.710438!10038-101F2;0.497665!10838-111E1;0.708454!10759-110E3;0.000649644!10514-107E1;0.372784!10465-106H6;0.163179!10691-109F7;0.0433336!10843-111E6;0.333256!10844-111E7;0.00481868!11747-123G1;0.000600403!11748-123G2;0.0732521!11749-123G3;0.241843!11750-123G4;0.0236658!11751-123G5;0.473745!11840-124H4;0.0617739!11752-123G6;0.134104!11753-123G7;0.390184!11754-123G8;0.0626345!11755-123G9;0.28094!11756-123H1;0.277738!11833-124G6;0.297198!11760-123H5;0.893374!11836-124G9;0.401154!11758-123H3;0.040746!11835-124G8;0.137679!11762-123H7;0.297777!11838-124H2;0.026599!11757-123H2;0.293555!11759-123H4;0.35863!11761-123H6;0.297095!11842-124H6;0.251998!11837-124H1;0.457736!10568-108B1;0.308884!13230-141I8;0.998025!13231-141I9;0.191092!10696-109G3;0.23623!10493-107B7;0.500204!10494-107B8;0.556598!10850-111F4;0.486994!10851-111F5;0.667963!10852-111F6;0.823784!10853-111F7;0.276872!10854-111F8;0.932111!10855-111F9;0.333184!10856-111G1;0.319304!10847-111F1;0.305091!10846-111E9;0.268186!10848-111F2;0.499682!10845-111E8;0.372968!10857-111G2;0.701656!10858-111G3;0.326975!10156-103A3;0.702559!11901-125F2;0.278046!11902-125F3;0.469306!11903-125F4;0.302249!10689-109F5;0.402555!10648-109A9;0.484543!10784-110H1;0.632306!10744-110C6;0.879831!10772-110F7;0.772587!10474-106I6;0.361543!10600-108E6;0.469384!10684-109E9;0.125251!12226-129F3;0.173653!12227-129F4;0.937153!10508-107D4;0.833018!10539-107G8;5.36507e-07!10607-108F4;0.00192476!10555-107I6;0.0832002!10774-110F9;0.00162512!10637-108I7;0.0854001!10663-109C6;0.00162812!10728-110A8;0.00619679!10729-110A9;0.02274!10430-106D7;0.411706!10730-110B1;0.055017!10813-111B3;0.0599192!10812-111B2;0.859431!10037-101F1;0.0274941!10172-103C1;0.272638!10163-103B1;0.241329!10076-102A4;0.261383!10073-102A1;0.323922!10036-101E9;0.109099!10195-103E6;0.291451!10277-104E7;0.332879!10434-106E2;0.491081!10550-107I1;0.951446!10545-107H5;0.553575!10544-107H4;0.823645!10704-109H2;0.876716!10510-107D6;0.0999984!10558-107I9;0.0875261!10020-101D2;0.00946496!10732-110B3;0.2993!10049-101G4;0.671108!10698-109G5;0.0168313!10437-106E5;0.137523!10417-106C3;0.895273!10035-101E8;0.460377!10171-103B9;0.277678!10157-103A4;0.274146!10034-101E7;0.314216!10072-101I9;0.285386!10199-103F1;0.102116!10200-103F2;0.115574!10697-109G4;0.0244178!10723-110A3;0.018414!10179-103C8;0.840616!10160-103A7;0.223197!10180-103C9;0.174255!10162-103A9;0.113928!10021-101D3;0.0625343!10840-111E3;0.103021!10706-109H4;0.265236!10033-101E6;0.154084!10032-101E5;0.331274!10490-107B4;0.30049!10439-106E7;0.840775!10022-101D4;0.651072!10176-103C5;0.312669!10469-106I1;0.199936!10067-101I4;0.834727!10411-106B6;0.365257!10471-106I3;0.0314419!10030-101E3;0.124695!10475-106I7;0.915644!10787-110H4;0.00103119!10477-106I9;0.300435!10695-109G2;0.00751876!11771-123I7;0.336738!11772-123I8;0.644734!11773-123I9;0.761179!10093-102C3;0.858174!10442-106F1;0.0587068!10442-106F1;0.313491!10201-103F3;0.217201!10639-108I9;0.249774!11843-124H7;0.744472!11841-124H5;0.0994221!10693-109F9;0.386982!10436-106E4;0.376441!10483-107A6;0.942658!10282-104F3;0.0757678!10023-101D5;0.0481172!10066-101I3;0.0313419!10065-101I2;0.085362!10800-110I8;0.104033!10610-108F7;0.04875!10841-111E4;0.00221825!10541-107H1;0.0191403!10842-111E5;0.050937!10562-108A4;0.000595155!10024-101D6;0.0466214!10064-101I1;1.04908e-12!10609-108F6;7.27116e-06!10048-101G3;0.264863!10781-110G7;0.285044!10181-103D1;0.178595!10159-103A6;0.816952!10056-101H2;0.539529!10737-110B8;0.98672!10025-101D7;0.995275!10044-101F8;0.0856288!10424-106D1;0.169759!10463-106H4;0.220923!10616-108G4;0.796023!10486-107A9;0.577352!10062-101H8;0.414969!10202-103F4;0.107632!10158-103A5;0.0755536!10441-106E9;0.687254!10031-101E4;0.0303641!10063-101H9;0.343222!10063-101H9;0.0568641!11763-123H8;0.0141447!11765-123I1;0.0528793!11768-123I4;0.105172!10807-111A6;0.103722!10790-110H7;0.0789878!10798-110I6;0.00884207!10786-110H3;0.00580535!10591-108D6;0.0875381!10593-108D8;0.0187905!10590-108D5;0.0250369!10026-101D8;0.11599!10096-102C6;0.113562!10168-103B6;0.71481!10154-103A1;0.362405!10209-103G2;0.359262!10061-101H7;0.00535035!10027-101D9;0.155016!10043-101F7;0.136346!10783-110G9;0.743519!10028-101E1;0.741699!10060-101H6;0.304222!10203-103F5;0.179166!10059-101H5;0.00479002!10047-101G2;0.0053365!10029-101E2;0.00708987!10058-101H4;0.029055!10418-106C4;0.11297!10492-107B6;0.363684!10694-109G1;0.0878508!10797-110I5;0.265072!10057-101H3;0.512827!10100-102D1;0.0344608!10055-101H1;0.2878!10204-103F6;0.3058!10191-103E2;0.682569!10563-108A5;0.074351
|name=HNF4G_f1
|name=HNF4G_f1
|tomtom_result=HNF4A#MA0114.1;1;1.92401e-07;9.15831e-05;0.00018254;12;GGCCAAAGTCCA;AGGCCAAAGGTCA;+!NR2F1#MA0017.1;2;1.25697e-05;0.00598318;0.00596271;12;GGCCAAAGTCCA;AGGTTCAAAGGTCA;-!PPARG::RXRA#MA0065.2;3;6.40379e-05;0.0304821;0.0202519;12;GGCCAAAGTCCA;GTAGGGCAAAGGTCA;+!PPARG::RXRA#MA0065.2;5;0.00176691;0.841051;0.396194;12;GGCCAAAGTCCA;CTAGGGGTCAAAGGTCATCG;+!NR1H2::RXRA#MA0115.1;3;0.00208799;0.993885;0.396194;12;GGCCAAAGTCCA;AAAGGTCAAAGGTCAAC;+!Esrrb#MA0141.1;0;0.00327089;1.55694;0.485411;12;GGCCAAAGTCCA;AGCTCAAGGTCA;+!BAS1#MA0278.1;4;0.00361034;1.71852;0.485411;12;GGCCAAAGTCCA;GCACAGCCAGAGTCAAGTCAA;+!GAL4#MA0299.1;2;0.00409309;1.94831;0.485411;12;GGCCAAAGTCCA;CGGGGAACAGTACTC;+!tll#MA0459.1;-3;0.00751852;3.57882;0.747594;9;GGCCAAAGTCCA;AAAAGTCAAA;+!Foxa2#MA0047.2;-2;0.00787983;3.7508;0.747594;10;GGCCAAAGTCCA;CCTAAGTAAACA;-!PBF#MA0064.1;-4;0.0143025;6.808;0.99658;5;GGCCAAAGTCCA;AAAGC;+!Dof3#MA0021.1;-4;0.016089;7.65837;0.99658;6;GGCCAAAGTCCA;AAAGCG;+!MET28#MA0332.1;-2;0.0207066;9.85633;0.99658;6;GGCCAAAGTCCA;CCACAG;-
}}
}}

Latest revision as of 12:07, 7 September 2012

Full Name: HNF4G_f1

Motif matrix
POACGT
10.240196078431372721.6127450980392154.9068627450980410.24019607843137272
20.00.05.07843137254901761.921568627450983
31.09803921568627283.5686274509803961.99019607843137210.3431372549019604
40.07.00.00.0
55.1470588235294131.3725490196078430.00.48039215686274467
64.5294117647058771.3725490196078431.09803921568627280.0
76.5196078431372560.00.480392156862744670.0
80.00.07.00.0
90.01.3725490196078430.8235294117647034.803921568627454
101.3725490196078434.4607843137254890.01.166666666666669
110.07.00.00.0
127.00.00.00.0

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
HNF4A#MA0114.111.92401e-079.15831e-050.0001825412GGCCAAAGTCCAAGGCCAAAGGTCA+
NR2F1#MA0017.121.25697e-050.005983180.0059627112GGCCAAAGTCCAAGGTTCAAAGGTCA-
PPARG::RXRA#MA0065.236.40379e-050.03048210.020251912GGCCAAAGTCCAGTAGGGCAAAGGTCA+
PPARG::RXRA#MA0065.250.001766910.8410510.39619412GGCCAAAGTCCACTAGGGGTCAAAGGTCATCG+
NR1H2::RXRA#MA0115.130.002087990.9938850.39619412GGCCAAAGTCCAAAAGGTCAAAGGTCAAC+
Esrrb#MA0141.100.003270891.556940.48541112GGCCAAAGTCCAAGCTCAAGGTCA+
BAS1#MA0278.140.003610341.718520.48541112GGCCAAAGTCCAGCACAGCCAGAGTCAAGTCAA+
GAL4#MA0299.120.004093091.948310.48541112GGCCAAAGTCCACGGGGAACAGTACTC+
tll#MA0459.1-30.007518523.578820.7475949GGCCAAAGTCCAAAAAGTCAAA+
Foxa2#MA0047.2-20.007879833.75080.74759410GGCCAAAGTCCACCTAAGTAAACA-
PBF#MA0064.1-40.01430256.8080.996585GGCCAAAGTCCAAAAGC+
Dof3#MA0021.1-40.0160897.658370.996586GGCCAAAGTCCAAAAGCG+
MET28#MA0332.1-20.02070669.856330.996586GGCCAAAGTCCACCACAG-
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