FFCP PHASE1:Mm9::chr7:151008698..151008762,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr7:151008698..151008762,- | |id=chr7:151008698..151008762,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.06e-15!59;UBERON:0000160!2.58e-14!43;UBERON:0001007!4.56e-14!128;UBERON:0001555!4.56e-14!128;UBERON:0007026!4.56e-14!128;UBERON:0004119!1.11e-13!130;UBERON:0000925!1.11e-13!130;UBERON:0006595!1.11e-13!130;UBERON:0004921!4.34e-13!126;UBERON:0004185!4.34e-13!126;UBERON:0000344!2.54e-10!15;UBERON:0001242!3.48e-09!13;UBERON:0000060!3.48e-09!13;UBERON:0001262!3.48e-09!13;UBERON:0004786!3.48e-09!13;UBERON:0009854!8.36e-09!23;UBERON:0009856!8.36e-09!23;UBERON:0002107!3.39e-08!22;UBERON:0007499!3.39e-08!22;UBERON:0006925!3.39e-08!22;UBERON:0009497!3.39e-08!22;UBERON:0000015!3.39e-08!22;UBERON:0002423!3.39e-08!22;UBERON:0006235!3.39e-08!22;UBERON:0008835!3.39e-08!22;UBERON:0003894!3.39e-08!22;UBERON:0004161!3.39e-08!22;UBERON:0008836!3.39e-08!22;UBERON:0005172!2.06e-07!49;UBERON:0005173!2.06e-07!49;UBERON:0002417!2.06e-07!49;UBERON:0000916!2.06e-07!49;UBERON:0004923!3.11e-07!24;UBERON:0002365!3.69e-07!25;UBERON:0002330!3.69e-07!25 | |ontology_enrichment_uberon=UBERON:0005409!4.06e-15!59;UBERON:0000160!2.58e-14!43;UBERON:0001007!4.56e-14!128;UBERON:0001555!4.56e-14!128;UBERON:0007026!4.56e-14!128;UBERON:0004119!1.11e-13!130;UBERON:0000925!1.11e-13!130;UBERON:0006595!1.11e-13!130;UBERON:0004921!4.34e-13!126;UBERON:0004185!4.34e-13!126;UBERON:0000344!2.54e-10!15;UBERON:0001242!3.48e-09!13;UBERON:0000060!3.48e-09!13;UBERON:0001262!3.48e-09!13;UBERON:0004786!3.48e-09!13;UBERON:0009854!8.36e-09!23;UBERON:0009856!8.36e-09!23;UBERON:0002107!3.39e-08!22;UBERON:0007499!3.39e-08!22;UBERON:0006925!3.39e-08!22;UBERON:0009497!3.39e-08!22;UBERON:0000015!3.39e-08!22;UBERON:0002423!3.39e-08!22;UBERON:0006235!3.39e-08!22;UBERON:0008835!3.39e-08!22;UBERON:0003894!3.39e-08!22;UBERON:0004161!3.39e-08!22;UBERON:0008836!3.39e-08!22;UBERON:0005172!2.06e-07!49;UBERON:0005173!2.06e-07!49;UBERON:0002417!2.06e-07!49;UBERON:0000916!2.06e-07!49;UBERON:0004923!3.11e-07!24;UBERON:0002365!3.69e-07!25;UBERON:0002330!3.69e-07!25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.49e-18,31;UBERON:0005409,6.47e-18,47;UBERON:0001007,9.78e-15,116;UBERON:0001555,9.78e-15,116;UBERON:0007026,9.78e-15,116;UBERON:0004119,2.63e-14,118;UBERON:0000925,2.63e-14,118;UBERON:0006595,2.63e-14,118;UBERON:0004921,9.95e-14,114;UBERON:0000344,2.54e-10,15;UBERON:0001242,3.48e-09,13;UBERON:0001262,3.48e-09,13;UBERON:0004786,3.48e-09,13;UBERON:0009854,8.36e-09,23;UBERON:0009856,8.36e-09,23;UBERON:0002107,3.39e-08,22;UBERON:0007499,3.39e-08,22;UBERON:0006925,3.39e-08,22;UBERON:0009497,3.39e-08,22;UBERON:0000015,3.39e-08,22;UBERON:0002423,3.39e-08,22;UBERON:0006235,3.39e-08,22;UBERON:0008835,3.39e-08,22;UBERON:0003894,3.39e-08,22;UBERON:0004161,3.39e-08,22;UBERON:0008836,3.39e-08,22;UBERON:0005172,2.06e-07,49;UBERON:0005173,2.06e-07,49;UBERON:0002417,2.06e-07,49;UBERON:0000916,2.06e-07,49;UBERON:0004923,3.11e-07,24;UBERON:0002365,3.69e-07,25;UBERON:0002330,3.69e-07,25 | |||
|phase1_expression=6.24580503708696,40.1321718785265,31.8499467572675,71.9864822910256,74.6334637620057,20.3133919013387,19.3898491694286,9.68424925811822,2.111830832275,1.40438715793196,3.5955773327356,2.15384829287408,10.785645985666,11.1023911072127,4.33042690360362,5.26435695213547,3.49780939064073,13.4071420277251,16.0423887318714,14.429248161133,11.4808441703944,8.53902180327614,12.015190300391,30.2385679079539,34.4113921600755,31.5827580263261,27.9995297503399,28.0112602491656,62.8977518400598,39.5687303723091,31.9291935343639,10.1604907753541,5.53558308826113,0,48.2382204984629,31.9170519088305,39.2005164023749,8.78916424547506,6.2506827561904,8.37637990358077,17.0587131528994,10.2456822743767,10.1957174136542,4.40638862914521,4.35920804243913,5.13930906052708,14.0830441982647,7.19483016055474,7.24964403023757,4.27745777963423,4.89952475688769,10.062679505548,12.751478060388,3.62681071005672,4.03312558970957,1.80081605225163,2.57880095944881,1.54701627683233,6.47412674750713,4.23192783417626,4.43681982454325,1.69422266034566,8.00365316500025,4.49949858640699,3.9554654502679,4.9733608046227,5.99200221036809,6.91592949578798,3.52544681848824,4.18518408828241,2.73422449756797,2.28520787523043,4.19650227808066,3.30725157880376,3.45043695665651,1.83843757322004,5.50579404996943,5.61824287574826,6.45147439676223,5.01167893374737,5.21479568533735,3.12548022334056,8.09630697104005,6.19038871034848,5.34793867218835,3.83017161115768,3.27454865837937,5.03278503728312,3.3319525066601,5.97015324843606,8.69593466105033,15.487629785665,8.83962733820076,29.1439723484421,30.5394916200404,28.2256938871321,15.4488862144927,4.94247935476367,2.85764605063156,1.41335829804136,4.64783285263046,1.28326477414318,5.09610479413291,0,2.59789249213457,4.05375784760158,1.01104889002957,21.8091210263405,14.7594593678888,8.90652834388949,8.50078101154066,9.13396434936424,8.30215790121811,9.04335843315735,9.17191915658498,7.6656620711102,7.91023896749996,10.2665543413137,5.30766331169925,4.85300549842228,6.40440403535141,7.27312879702833,50.325775528893,8.19786231632332,6.70229461803056,53.6459815938042,3.11519323715393,2.99951365496704,3.93917703926501,10.3355541189328,6.40500843946077,2.89005009859588,5.9100268865374,3.58001640262463,5.81806524766768,5.67844420737152,4.17541391786297,8.45967400148633,5.55990068554084,5.89237196482127,6.37590170517248,6.20735681970377,4.68161537493908,9.19299388797862,4.69451844144162,9.86475646193343,6.55912071918102,8.01980449290949,3.44908788692548,6.05139456537022,7.74184946321375,5.2606975782618,5.28289773528636,7.66154766348766,6.79081050146213,7.76233640592123,2.1066395619397,3.60287069960601,4.26245249093389,5.79952163099405,7.97388603935727,7.38254451990161,6.8655973319711,10.231740050865,9.71882811190483,10.2314935690179,7.77992864058896,7.12268588439734,9.54447129498187,10.342550236983,6.48550476366846,7.60239934611728,6.58650345873152,6.30770168173747,5.25724871410318,4.01327988279209,71.7008759074842,47.8655525661015,9.81125952462076,10.4506502337197,11.4692040576663,21.176770085451,26.9077433052293,28.5338439168839,54.5708420776188,32.9397909448022,26.3901969240283,27.2570366696377,31.9741102875357,44.0421510240569,44.7405763240617,52.3741548658986,6.2590407314517,8.45438993311993,13.5249282807697,8.14605311381257,9.69762435838129,7.36426108848345,12.8370170362242,22.4367424928995,19.9388384358546,19.4967518996445,21.937494404449,7.17433954579204,7.66580080941492,12.1425540687821,11.3601667977562,14.9529839046498,18.3330613282622,16.686375972147,18.6455510791291,26.0833342528677,24.4405951096503,21.5841749647732,25.2750515222794,30.3094653536534,26.0126249606773,29.4290548031654,8.12914036733061,6.82169082373745,6.84452901056509,6.45031325945715,7.97946844180907,9.88286918906713,6.66522194480839,6.04914308359176,7.72412206120336,6.86540537911202,8.45110273884682,9.83179888294428,10.5337838938196,7.66640010482011,9.04747703635634,9.79030230873677,2.95058563811422,6.89841865761831,12.0412942490844,6.09500770279457,0.491804836130026,4.03953483526997,4.73262329124385,3.12350995437311,5.60100834105277,5.73525115086125,7.12955757063661,3.96307143104365,3.64329631507405,4.67609372658099,4.34816555741176,7.39039027770156,9.08416545332919,7.83488656135923,4.56083486190013,13.5275500837479,10.619611067197,3.64170954232472,10.5813244937663,6.03536255218874,6.496641643377,6.45613810682248,10.3371317267288,9.81541069589265,9.26893183800275,7.9009189483954,9.48767477174989,2.06271086496374,15.3197822589205,7.0223826672211,8.5376731296618,9.00215547132688,8.6896714484714,7.84822797449111,8.88564711251453,7.61162372786498,7.27482294997502,5.93129798418696,10.8058915046931,4.45192882941996,3.87514624070173,5.66941494324665,5.37175548014114,5.41664969158702,48.9687805538149,6.67531087237835,9.56876932467975,7.01715351074956,8.14855920426731,6.59289599516419,7.79157098009843,9.60868327467395,4.41943917984024,3.07893195112048,2.3493995546752,13.3653886522116,6.32671987162271,6.70954241518601,10.4765180597147,10.245326504709,10.4814030598165,11.4634694427098,12.5633252702511,13.3495530411855,32.6629732695318,13.6694648879124,10.1464728963154,6.13017838780313,7.94200754194069,7.19469396872976,7.4912697617084,8.10989402355735,4.69428954583016,7.16124116641726,7.44501345422547,9.42178071221424,11.8092302565725,12.0084225838708,5.47358081283443,6.98434508720825,6.75588279484534,6.98204113103178,4.96703386953162,7.45211787023807,6.94140777720513,7.06765149637033,7.62068066549998,9.37683521772617,6.91950953252242,7.60073548958603,6.778860326531,8.84248496099324,1.77588762699252,3.58855426437903,1.84673078000486,7.14801497919105,9.75948872346146,8.24182309202693,6.21668299329291,9.02829787263654,7.34177395402186,4.14292712856459,5.15605962095457,3.60891682921744,7.53590771747707,5.2877572817279,5.40018000185445,5.40385443869065,3.17199686288943,3.62432218226274,3.73634451303036,10.7736715818278,6.82934423016537,8.265628380322,4.61148957781561,5.1476182366004,8.88986911206461,8.24140228955577,10.9112531261217,10.1078884705519,11.1530891951705,7.73367999682912,9.45779225445812,8.51534526984761,8.95993315707567,10.9547548995107,9.618399053423,9.83837024364896,9.06588981767275,9.86232764900462,5.14303878578123,10.1161209510822,9.29901140794552,9.1568242478367,10.7284693673477,8.88453382862603,8.04883080640199,12.8904158604543,10.8643291076689,12.3451299764702,9.37216643180976,9.1609168609274,11.4584692087513,10.6906420418317,8.68079749415136,8.74337022782811,9.82512755470715,7.52048689169044,3.44318997723918,7.72069966918304,6.02856372613096 | |phase1_expression=6.24580503708696,40.1321718785265,31.8499467572675,71.9864822910256,74.6334637620057,20.3133919013387,19.3898491694286,9.68424925811822,2.111830832275,1.40438715793196,3.5955773327356,2.15384829287408,10.785645985666,11.1023911072127,4.33042690360362,5.26435695213547,3.49780939064073,13.4071420277251,16.0423887318714,14.429248161133,11.4808441703944,8.53902180327614,12.015190300391,30.2385679079539,34.4113921600755,31.5827580263261,27.9995297503399,28.0112602491656,62.8977518400598,39.5687303723091,31.9291935343639,10.1604907753541,5.53558308826113,0,48.2382204984629,31.9170519088305,39.2005164023749,8.78916424547506,6.2506827561904,8.37637990358077,17.0587131528994,10.2456822743767,10.1957174136542,4.40638862914521,4.35920804243913,5.13930906052708,14.0830441982647,7.19483016055474,7.24964403023757,4.27745777963423,4.89952475688769,10.062679505548,12.751478060388,3.62681071005672,4.03312558970957,1.80081605225163,2.57880095944881,1.54701627683233,6.47412674750713,4.23192783417626,4.43681982454325,1.69422266034566,8.00365316500025,4.49949858640699,3.9554654502679,4.9733608046227,5.99200221036809,6.91592949578798,3.52544681848824,4.18518408828241,2.73422449756797,2.28520787523043,4.19650227808066,3.30725157880376,3.45043695665651,1.83843757322004,5.50579404996943,5.61824287574826,6.45147439676223,5.01167893374737,5.21479568533735,3.12548022334056,8.09630697104005,6.19038871034848,5.34793867218835,3.83017161115768,3.27454865837937,5.03278503728312,3.3319525066601,5.97015324843606,8.69593466105033,15.487629785665,8.83962733820076,29.1439723484421,30.5394916200404,28.2256938871321,15.4488862144927,4.94247935476367,2.85764605063156,1.41335829804136,4.64783285263046,1.28326477414318,5.09610479413291,0,2.59789249213457,4.05375784760158,1.01104889002957,21.8091210263405,14.7594593678888,8.90652834388949,8.50078101154066,9.13396434936424,8.30215790121811,9.04335843315735,9.17191915658498,7.6656620711102,7.91023896749996,10.2665543413137,5.30766331169925,4.85300549842228,6.40440403535141,7.27312879702833,50.325775528893,8.19786231632332,6.70229461803056,53.6459815938042,3.11519323715393,2.99951365496704,3.93917703926501,10.3355541189328,6.40500843946077,2.89005009859588,5.9100268865374,3.58001640262463,5.81806524766768,5.67844420737152,4.17541391786297,8.45967400148633,5.55990068554084,5.89237196482127,6.37590170517248,6.20735681970377,4.68161537493908,9.19299388797862,4.69451844144162,9.86475646193343,6.55912071918102,8.01980449290949,3.44908788692548,6.05139456537022,7.74184946321375,5.2606975782618,5.28289773528636,7.66154766348766,6.79081050146213,7.76233640592123,2.1066395619397,3.60287069960601,4.26245249093389,5.79952163099405,7.97388603935727,7.38254451990161,6.8655973319711,10.231740050865,9.71882811190483,10.2314935690179,7.77992864058896,7.12268588439734,9.54447129498187,10.342550236983,6.48550476366846,7.60239934611728,6.58650345873152,6.30770168173747,5.25724871410318,4.01327988279209,71.7008759074842,47.8655525661015,9.81125952462076,10.4506502337197,11.4692040576663,21.176770085451,26.9077433052293,28.5338439168839,54.5708420776188,32.9397909448022,26.3901969240283,27.2570366696377,31.9741102875357,44.0421510240569,44.7405763240617,52.3741548658986,6.2590407314517,8.45438993311993,13.5249282807697,8.14605311381257,9.69762435838129,7.36426108848345,12.8370170362242,22.4367424928995,19.9388384358546,19.4967518996445,21.937494404449,7.17433954579204,7.66580080941492,12.1425540687821,11.3601667977562,14.9529839046498,18.3330613282622,16.686375972147,18.6455510791291,26.0833342528677,24.4405951096503,21.5841749647732,25.2750515222794,30.3094653536534,26.0126249606773,29.4290548031654,8.12914036733061,6.82169082373745,6.84452901056509,6.45031325945715,7.97946844180907,9.88286918906713,6.66522194480839,6.04914308359176,7.72412206120336,6.86540537911202,8.45110273884682,9.83179888294428,10.5337838938196,7.66640010482011,9.04747703635634,9.79030230873677,2.95058563811422,6.89841865761831,12.0412942490844,6.09500770279457,0.491804836130026,4.03953483526997,4.73262329124385,3.12350995437311,5.60100834105277,5.73525115086125,7.12955757063661,3.96307143104365,3.64329631507405,4.67609372658099,4.34816555741176,7.39039027770156,9.08416545332919,7.83488656135923,4.56083486190013,13.5275500837479,10.619611067197,3.64170954232472,10.5813244937663,6.03536255218874,6.496641643377,6.45613810682248,10.3371317267288,9.81541069589265,9.26893183800275,7.9009189483954,9.48767477174989,2.06271086496374,15.3197822589205,7.0223826672211,8.5376731296618,9.00215547132688,8.6896714484714,7.84822797449111,8.88564711251453,7.61162372786498,7.27482294997502,5.93129798418696,10.8058915046931,4.45192882941996,3.87514624070173,5.66941494324665,5.37175548014114,5.41664969158702,48.9687805538149,6.67531087237835,9.56876932467975,7.01715351074956,8.14855920426731,6.59289599516419,7.79157098009843,9.60868327467395,4.41943917984024,3.07893195112048,2.3493995546752,13.3653886522116,6.32671987162271,6.70954241518601,10.4765180597147,10.245326504709,10.4814030598165,11.4634694427098,12.5633252702511,13.3495530411855,32.6629732695318,13.6694648879124,10.1464728963154,6.13017838780313,7.94200754194069,7.19469396872976,7.4912697617084,8.10989402355735,4.69428954583016,7.16124116641726,7.44501345422547,9.42178071221424,11.8092302565725,12.0084225838708,5.47358081283443,6.98434508720825,6.75588279484534,6.98204113103178,4.96703386953162,7.45211787023807,6.94140777720513,7.06765149637033,7.62068066549998,9.37683521772617,6.91950953252242,7.60073548958603,6.778860326531,8.84248496099324,1.77588762699252,3.58855426437903,1.84673078000486,7.14801497919105,9.75948872346146,8.24182309202693,6.21668299329291,9.02829787263654,7.34177395402186,4.14292712856459,5.15605962095457,3.60891682921744,7.53590771747707,5.2877572817279,5.40018000185445,5.40385443869065,3.17199686288943,3.62432218226274,3.73634451303036,10.7736715818278,6.82934423016537,8.265628380322,4.61148957781561,5.1476182366004,8.88986911206461,8.24140228955577,10.9112531261217,10.1078884705519,11.1530891951705,7.73367999682912,9.45779225445812,8.51534526984761,8.95993315707567,10.9547548995107,9.618399053423,9.83837024364896,9.06588981767275,9.86232764900462,5.14303878578123,10.1161209510822,9.29901140794552,9.1568242478367,10.7284693673477,8.88453382862603,8.04883080640199,12.8904158604543,10.8643291076689,12.3451299764702,9.37216643180976,9.1609168609274,11.4584692087513,10.6906420418317,8.68079749415136,8.74337022782811,9.82512755470715,7.52048689169044,3.44318997723918,7.72069966918304,6.02856372613096 | ||
|short_description=p1@Nadsyn1 | |short_description=p1@Nadsyn1 | ||
}} | }} |
Revision as of 02:54, 14 November 2012
Short description: | p1@Nadsyn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nadsyn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000033415, ENSMUST00000132520, ENSMUST00000142749, ENSMUST00000143366, ENSMUST00000156779, NM_030221, uc009kqa.1, uc009kqb.1_5end |
EntrezGene: | Nadsyn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.49e-18 | 31 |
gastrointestinal system | 6.47e-18 | 47 |
digestive system | 9.78e-15 | 116 |
digestive tract | 9.78e-15 | 116 |
primitive gut | 9.78e-15 | 116 |
endoderm-derived structure | 2.63e-14 | 118 |
endoderm | 2.63e-14 | 118 |
presumptive endoderm | 2.63e-14 | 118 |
subdivision of digestive tract | 9.95e-14 | 114 |
mucosa | 2.54e-10 | 15 |
intestinal mucosa | 3.48e-09 | 13 |
wall of intestine | 3.48e-09 | 13 |
gastrointestinal system mucosa | 3.48e-09 | 13 |
digestive tract diverticulum | 8.36e-09 | 23 |
sac | 8.36e-09 | 23 |
liver | 3.39e-08 | 22 |
epithelial sac | 3.39e-08 | 22 |
digestive gland | 3.39e-08 | 22 |
epithelium of foregut-midgut junction | 3.39e-08 | 22 |
anatomical boundary | 3.39e-08 | 22 |
hepatobiliary system | 3.39e-08 | 22 |
foregut-midgut junction | 3.39e-08 | 22 |
hepatic diverticulum | 3.39e-08 | 22 |
liver primordium | 3.39e-08 | 22 |
septum transversum | 3.39e-08 | 22 |
liver bud | 3.39e-08 | 22 |
abdomen element | 2.06e-07 | 49 |
abdominal segment element | 2.06e-07 | 49 |
abdominal segment of trunk | 2.06e-07 | 49 |
abdomen | 2.06e-07 | 49 |
organ component layer | 3.11e-07 | 24 |
exocrine gland | 3.69e-07 | 25 |
exocrine system | 3.69e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.