FFCP PHASE1:Mm9::chr7:16899402..16899412,-: Difference between revisions
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|id=chr7:16899402..16899412,- | |id=chr7:16899402..16899412,- | ||
|ontology_enrichment_celltype=CL:0000063!6.33e-12!66;CL:0000144!6.94e-09!121;CL:0000012!6.94e-09!121;CL:0002320!8.37e-08!46;CL:0000134!8.37e-08!46;CL:0002371!8.96e-08!118;CL:0000219!1.44e-07!54;CL:0000548!2.29e-07!115;CL:0000004!2.29e-07!115;CL:0000255!2.29e-07!115;CL:0000066!2.44e-07!25;CL:0002563!4.23e-07!9;CL:0002251!4.23e-07!9 | |ontology_enrichment_celltype=CL:0000063!6.33e-12!66;CL:0000144!6.94e-09!121;CL:0000012!6.94e-09!121;CL:0002320!8.37e-08!46;CL:0000134!8.37e-08!46;CL:0002371!8.96e-08!118;CL:0000219!1.44e-07!54;CL:0000548!2.29e-07!115;CL:0000004!2.29e-07!115;CL:0000255!2.29e-07!115;CL:0000066!2.44e-07!25;CL:0002563!4.23e-07!9;CL:0002251!4.23e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.14e-19,25;CL:0002563,1.98e-17,9;CL:0002251,1.98e-17,9;CL:0000223,1.07e-14,20;CL:0000239,5.67e-14,6;CL:0000677,5.67e-14,6;CL:0000584,5.67e-14,6;CL:0000075,6.24e-12,7;CL:0002320,2.79e-10,46;CL:0000134,2.79e-10,46;CL:0002076,4.61e-10,15;CL:0000682,6.75e-10,3;CL:0000219,9.71e-10,54;CL:0000988,1.75e-09,32;CL:0002032,1.75e-09,32;CL:0000037,1.75e-09,32;CL:0000837,1.75e-09,32;CL:0000049,3.27e-09,19;CL:0000723,2.62e-07,91;CL:0000048,2.62e-07,91;CL:0000473,3.25e-07,7;CL:0000557,6.68e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.50e-08!15;UBERON:0001242!6.28e-08!13;UBERON:0000060!6.28e-08!13;UBERON:0001262!6.28e-08!13;UBERON:0004786!6.28e-08!13;UBERON:0002384!8.37e-08!46;UBERON:0003350!4.23e-07!9;UBERON:0004808!4.23e-07!9;UBERON:0001277!4.23e-07!9 | |ontology_enrichment_uberon=UBERON:0000344!5.50e-08!15;UBERON:0001242!6.28e-08!13;UBERON:0000060!6.28e-08!13;UBERON:0001262!6.28e-08!13;UBERON:0004786!6.28e-08!13;UBERON:0002384!8.37e-08!46;UBERON:0003350!4.23e-07!9;UBERON:0004808!4.23e-07!9;UBERON:0001277!4.23e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.98e-17,9;UBERON:0004808,1.98e-17,9;UBERON:0001277,1.98e-17,9;UBERON:0000485,4.40e-14,11;UBERON:0001242,9.17e-12,13;UBERON:0001262,9.17e-12,13;UBERON:0004786,9.17e-12,13;UBERON:0002384,2.79e-10,46;UBERON:0000344,4.61e-10,15 | |||
|phase1_expression=0,3.14077866875425,0.454999239389536,7.56160528267075,12.0214975187123,2.51818907867835,2.56973904655078,1.29123323441576,0.985521055061667,0.468129052643987,0.34243593645101,0,0.342401459862411,0.437102012094987,0.333109761815663,0.202475267389826,0,0,0,0,0.17008658030214,0.198581902401771,0.261199789138935,0.159992422793407,0.68822784320151,3.44539178469012,1.29228598847722,2.15471232685889,0.760093677825496,0.252030129759931,0.665191531965914,6.98533740805594,5.53558308826113,0,2.3108129580102,0.664938581433969,4.49172583777212,0,2.3440060335714,0.523523743973798,11.1763982725893,0,0.485510353031154,0.503587271902309,0.304130793658544,0.183546752161682,1.56478268869608,0.436050312760893,0.439372365468944,0.194429899074283,0,0,0.167782606057736,2.17608642603403,1.34437519656986,0,0,0.515672092277442,0,0.528990979272033,0,0,0,0.449949858640699,0,0.7104801149461,0.599200221036809,0.768436610643109,0,0,0,0,0.220868540951614,0,0.191690942036473,0,0,0.255374676170375,0,0.527545150920775,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,7.24661221754194,0.860423876981386,0.679971333707751,1.07940638327563,2.59910566979068,0.448026887097336,0,0.340860645156116,0.519572009205738,0.70667914902068,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.445326417194474,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0,0,0,0.599075622529601,2.39961092397363,1.27070227073065,0.299581278809645,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.203678727700633,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0.348252166522167,0,0,2.1066395619397,1.02939162845886,1.42081749697796,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0.402619256281115,0,0.205809224758569,0.330418782983798,0.793351699990633,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0.995706366271836,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.126473074248515,0,0,0.246794327843601,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0.505157755894224,0,0.964887042726734,0.554259570499814,0.189491411770485,0,0,0.234690248288502,0.670025029767263,0.476087281772027,0.585400943573396,0.630540576424764,0,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,1.63171705145613,0.491764273019036,0,0,0.35163505977661,0,0,0.315508219416257,1.17131623288992,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0.790575555893047,0,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0.316036757935816,0,0,1.36175842301515,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,0,0.329098041204242,0.304464949114599,0,0.42366414172764,0,0.16488625294148,0,0.301564624640779,0,0.164140899745061,0.291480836629851,0,0.341741761595705,0,0,0,0,0.457556346413045,0.849892149969277,0.979660166265606,0.967399816630967,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.388844919875379,0.621339313086926,0,0,0.165458490457098,0.388902376688095,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.187283014939765,0.320125762024346,0.114870937911227,0.476293691283074,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.25384382367503,0.365855945745545,0.263069711437843,0,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0,0,0.441182838239031,0 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|phase1_expression=0,3.14077866875425,0.454999239389536,7.56160528267075,12.0214975187123,2.51818907867835,2.56973904655078,1.29123323441576,0.985521055061667,0.468129052643987,0.34243593645101,0,0.342401459862411,0.437102012094987,0.333109761815663,0.202475267389826,0,0,0,0,0.17008658030214,0.198581902401771,0.261199789138935,0.159992422793407,0.68822784320151,3.44539178469012,1.29228598847722,2.15471232685889,0.760093677825496,0.252030129759931,0.665191531965914,6.98533740805594,5.53558308826113,0,2.3108129580102,0.664938581433969,4.49172583777212,0,2.3440060335714,0.523523743973798,11.1763982725893,0,0.485510353031154,0.503587271902309,0.304130793658544,0.183546752161682,1.56478268869608,0.436050312760893,0.439372365468944,0.194429899074283,0,0,0.167782606057736,2.17608642603403,1.34437519656986,0,0,0.515672092277442,0,0.528990979272033,0,0,0,0.449949858640699,0,0.7104801149461,0.599200221036809,0.768436610643109,0,0,0,0,0.220868540951614,0,0.191690942036473,0,0,0.255374676170375,0,0.527545150920775,0.182975287204819,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0,0.151452386666368,0.0755715601067855,7.24661221754194,0.860423876981386,0.679971333707751,1.07940638327563,2.59910566979068,0.448026887097336,0,0.340860645156116,0.519572009205738,0.70667914902068,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,0,0.445326417194474,0.346970653532272,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.433798070759735,0,0,0,0,0,0,0,0,0.599075622529601,2.39961092397363,1.27070227073065,0.299581278809645,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.203678727700633,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0.189106080167819,0,0,0,0.348252166522167,0,0,2.1066395619397,1.02939162845886,1.42081749697796,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0.402619256281115,0,0.205809224758569,0.330418782983798,0.793351699990633,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0.19496408711912,0,0.216138049874694,0.995706366271836,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.126473074248515,0,0,0.246794327843601,0,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0.505157755894224,0,0.964887042726734,0.554259570499814,0.189491411770485,0,0,0.234690248288502,0.670025029767263,0.476087281772027,0.585400943573396,0.630540576424764,0,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,1.63171705145613,0.491764273019036,0,0,0.35163505977661,0,0,0.315508219416257,1.17131623288992,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0.790575555893047,0,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0.316036757935816,0,0,1.36175842301515,0.18006109403131,0.129358683782755,0.428674070063185,0.354680467284547,0,0.329098041204242,0.304464949114599,0,0.42366414172764,0,0.16488625294148,0,0.301564624640779,0,0.164140899745061,0.291480836629851,0,0.341741761595705,0,0,0,0,0.457556346413045,0.849892149969277,0.979660166265606,0.967399816630967,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0.388844919875379,0.621339313086926,0,0,0.165458490457098,0.388902376688095,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0.187283014939765,0.320125762024346,0.114870937911227,0.476293691283074,0.231768651889711,0.38581844092741,0,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0.25384382367503,0.365855945745545,0.263069711437843,0,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0,0,0.441182838239031,0 | ||
|short_description=p@chr7:16899402..16899412,- | |short_description=p@chr7:16899402..16899412,- | ||
}} | }} |
Revision as of 03:48, 14 November 2012
Short description: | p@chr7:16899402..16899412, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:16899402..16899412, - |
Coexpression cluster: | MCL_coexpression_mm9:386 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.14e-19 | 25 |
intestinal epithelial cell | 1.98e-17 | 9 |
epithelial cell of alimentary canal | 1.98e-17 | 9 |
endodermal cell | 1.07e-14 | 20 |
brush border epithelial cell | 5.67e-14 | 6 |
gut absorptive cell | 5.67e-14 | 6 |
enterocyte | 5.67e-14 | 6 |
columnar/cuboidal epithelial cell | 6.24e-12 | 7 |
connective tissue cell | 2.79e-10 | 46 |
mesenchymal cell | 2.79e-10 | 46 |
endo-epithelial cell | 4.61e-10 | 15 |
M cell of gut | 6.75e-10 | 3 |
motile cell | 9.71e-10 | 54 |
hematopoietic cell | 1.75e-09 | 32 |
hematopoietic oligopotent progenitor cell | 1.75e-09 | 32 |
hematopoietic stem cell | 1.75e-09 | 32 |
hematopoietic multipotent progenitor cell | 1.75e-09 | 32 |
common myeloid progenitor | 3.27e-09 | 19 |
somatic stem cell | 2.62e-07 | 91 |
multi fate stem cell | 2.62e-07 | 91 |
defensive cell | 3.25e-07 | 7 |
granulocyte monocyte progenitor cell | 6.68e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.98e-17 | 9 |
gastrointestinal system epithelium | 1.98e-17 | 9 |
intestinal epithelium | 1.98e-17 | 9 |
simple columnar epithelium | 4.40e-14 | 11 |
intestinal mucosa | 9.17e-12 | 13 |
wall of intestine | 9.17e-12 | 13 |
gastrointestinal system mucosa | 9.17e-12 | 13 |
connective tissue | 2.79e-10 | 46 |
mucosa | 4.61e-10 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.