FFCP PHASE1:Mm9::chr2:119722948..119723028,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr2:119722948..119723028,+ | |id=chr2:119722948..119723028,+ | ||
|ontology_enrichment_celltype=CL:0000542!2.56e-07!13;CL:0000051!2.56e-07!13;CL:0000838!5.35e-07!12;CL:0000791!9.18e-07!9;CL:0000789!9.18e-07!9;CL:0002420!9.18e-07!9;CL:0002419!9.18e-07!9;CL:0000790!9.18e-07!9 | |ontology_enrichment_celltype=CL:0000542!2.56e-07!13;CL:0000051!2.56e-07!13;CL:0000838!5.35e-07!12;CL:0000791!9.18e-07!9;CL:0000789!9.18e-07!9;CL:0002420!9.18e-07!9;CL:0002419!9.18e-07!9;CL:0000790!9.18e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.56e-07,13;CL:0000051,2.56e-07,13;CL:0000838,5.35e-07,12;CL:0000791,9.18e-07,9;CL:0000789,9.18e-07,9;CL:0002420,9.18e-07,9;CL:0002419,9.18e-07,9;CL:0000790,9.18e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000065!1.05e-08!41;UBERON:0001004!2.54e-08!42;UBERON:0002370!7.61e-07!23;UBERON:0000974!7.61e-07!23;UBERON:0004807!7.61e-07!23;UBERON:0005058!7.61e-07!23;UBERON:0003351!7.61e-07!23;UBERON:0009113!7.61e-07!23;UBERON:0003295!7.61e-07!23;UBERON:0009722!7.61e-07!23;UBERON:0005562!7.61e-07!23;UBERON:0007690!7.61e-07!23;UBERON:0004177!9.17e-07!29;UBERON:0001048!9.47e-07!147 | |ontology_enrichment_uberon=UBERON:0000065!1.05e-08!41;UBERON:0001004!2.54e-08!42;UBERON:0002370!7.61e-07!23;UBERON:0000974!7.61e-07!23;UBERON:0004807!7.61e-07!23;UBERON:0005058!7.61e-07!23;UBERON:0003351!7.61e-07!23;UBERON:0009113!7.61e-07!23;UBERON:0003295!7.61e-07!23;UBERON:0009722!7.61e-07!23;UBERON:0005562!7.61e-07!23;UBERON:0007690!7.61e-07!23;UBERON:0004177!9.17e-07!29;UBERON:0001048!9.47e-07!147 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,9.41e-10,43;UBERON:0000065,1.04e-08,41;UBERON:0001004,2.53e-08,42;UBERON:0007811,4.06e-08,36;UBERON:0000077,2.52e-07,35;UBERON:0002370,7.57e-07,23;UBERON:0000974,7.57e-07,23;UBERON:0004807,7.57e-07,23;UBERON:0005058,7.57e-07,23;UBERON:0003351,7.57e-07,23;UBERON:0009113,7.57e-07,23;UBERON:0003295,7.57e-07,23;UBERON:0009722,7.57e-07,23;UBERON:0005562,7.57e-07,23;UBERON:0007690,7.57e-07,23;UBERON:0004177,9.13e-07,29;UBERON:0005057,9.13e-07,29 | |||
|phase1_expression=26.5847086193958,9.42233600626275,12.739978702907,20.5675663688644,15.5277676283368,13.4303417529512,12.3814699515629,53.4570559048126,43.3629264227134,51.9623248434826,48.9683389124944,51.453042551992,56.4962408772979,54.6377515118734,18.3210368998615,18.627724599864,11.1929900500503,56.7831897644828,66.9118435996005,39.4682376172168,21.941168858976,26.6099749218373,32.1275740640891,14.3993180514066,12.15869189656,5.16808767703518,8.61523992318149,10.5580904016086,12.3515222646643,8.82105454159758,11.3082560434205,21.5910428976275,15.9916844771988,0,14.731432607315,11.9688944658114,16.1293791447272,25.9489611056883,15.626706890476,24.6056159667685,50.5879079706672,23.2235464885872,32.0436833000561,36.0064899410151,33.0488795775617,25.8800920547971,7.04152209913235,3.92445281484804,2.41654801007919,4.08302788055995,2.79972843250725,2.87505128729943,44.7979558174156,42.071004236658,41.0034434953806,13.1202312378333,22.9226751951005,15.4701627683233,9.71119012126069,13.2247744818008,9.50747105259269,3.72728985276045,0.889294796111139,2.6996991518442,5.93319817540185,3.5524005747305,3.59520132622086,1.53687322128622,15.1386833970377,10.3954572515402,9.67494822216357,6.56997264128748,8.61387309711293,15.4338407010842,10.3513108699695,11.9498442259303,14.3150645299205,16.7270412891596,16.4358990584181,12.1335384711778,6.40413505216868,13.5437476344758,6.97957497503452,22.5105044012672,22.0029476798607,12.6690291753677,20.5015220350708,15.4711540034999,18.4014649799637,21.3867515102203,48.9870985905835,8.60423876981386,4.0798280022465,4.31762553310254,8.4470934268197,5.82434953226536,9.97155382935438,14.827438064291,8.57293815189467,9.18682893726885,22.8166340038222,10.2661181931454,2.54805239706646,0,12.3399893376392,7.09407623330276,9.60496445528088,12.6744106488157,105.646656528046,25.383605780085,24.1144604204929,22.8349108734106,13.6063143381075,21.2518923179198,28.8092332482477,12.3153259503082,39.0568049020311,25.3048874609845,19.4614321428972,22.1620584427951,21.4216272906582,22.3042616442202,26.0948465705371,22.8369021669007,21.3635640949724,18.3929079750186,17.0137476798407,11.9980546198682,14.8672165675486,26.8125244534633,30.1950397860293,25.8847965352501,28.6810128317256,21.9915293304084,18.7009240103604,24.3361894601636,29.0242186973401,29.1112311227618,28.8103944614389,32.408045806517,37.2144466873333,27.3583504275833,30.2504378072987,35.2649273735573,38.9168775145595,42.661868854855,31.10897255383,45.2730898793277,23.0657752438141,42.1706558774237,45.9232434067907,25.2075092291711,39.2046621408093,35.521720985261,42.3911201000364,46.9720869691644,7.02213187313235,8.74982884190032,8.52490498186778,26.7192246570797,25.3288144779584,26.2890609733082,28.8828577413957,26.3664070541521,29.773552787264,30.9270146518042,16.0964040839772,22.1854150497622,22.5446994381468,25.774291860418,24.0774364351192,21.0527981892479,24.8091630278887,21.4730270016595,28.3891430561572,29.7394329776132,20.8163833279793,13.7514294665043,36.2590025909898,40.6414175755767,37.1138288607629,32.6727309889815,26.9077433052293,22.0661726290569,16.6085171540579,16.9639923365731,21.6148279568232,20.6914730922797,24.7604390641283,18.8752075817387,19.2362864388478,21.5072575114717,11.1904061562318,35.0742933711867,34.9393980586549,45.0069434538145,37.0449250490165,36.6810338026366,34.4639127327202,27.455487524206,21.351826986427,20.7307235388625,8.59712618552732,24.5262305402658,20.2455764966599,25.4094186994885,18.6631311677423,28.7000820105376,17.8238096246994,20.7141218964584,22.2125260681798,18.6701760967895,28.7536413054709,21.9563159124417,16.8500343481863,11.8712072635143,7.71408878144222,7.71909634181387,39.9066890759866,30.887100118589,36.0152597936877,33.1002917261617,32.3872542638133,42.714095647663,39.5152443870783,29.4651808265276,44.9260160702644,39.4207147574819,40.1826017016867,35.8860659227466,34.1916264094473,33.4139325323292,18.0949540727127,18.4927932498361,26.0635064700089,27.0418011378638,21.3532284683763,21.5669503329654,21.4754778443445,19.1877904675323,15.7754109708128,18.350620981942,31.6672394667214,23.8968797952552,30.0778210011232,28.3076530788832,28.3367491172426,26.5952830699294,22.1361155650053,33.4174169078679,40.0271040287317,21.9020692510724,33.7176005861903,44.047022833667,23.8941249011933,26.705869977048,22.9765903293211,36.2121753131324,14.4697927511579,31.9732553861685,32.3035366460276,27.2650297108129,32.7977588113944,36.028190404683,18.9753495434998,31.9720184069379,53.7894577090985,30.6103859853227,6.98536892426874,27.2208034490122,37.0641088312352,34.7819194324038,41.3018041711324,13.3964577610424,29.5686352160275,40.2480934641258,17.642271844397,21.1054403765094,42.1422153676313,35.8861903322527,26.6200327126994,28.2322347561505,23.6099477670179,23.9198639593557,30.4150167820178,28.2750009109615,34.075793036027,22.2274779265535,31.5763666035568,23.7929300134784,21.9272174692073,25.4711643229058,20.5917960968591,5.72802370809068,32.1081033484852,37.2074624842133,37.9098746284522,32.1995975862282,34.0645599444037,27.9169197016579,24.6307298061501,16.7523802869779,22.4233903794802,21.1255366449555,27.0572610568411,35.285904866379,25.3151490399359,37.7235305387452,29.0609602824895,43.5906803766208,37.5543163666413,35.8062058320863,37.6445046488302,39.619795815465,29.3790606383023,46.137623611714,19.0561702372754,29.7861775777999,30.6613142227596,39.027819655511,36.1600065701902,43.6309481757487,45.1929953154206,50.9880572238146,48.6199426458899,48.5982212359571,55.2586183794396,50.222581336252,62.4122657649578,24.713611814058,30.856047518995,18.8399098879899,20.9855770455098,27.2397327585389,27.2139589404214,36.2640216049185,30.4403098292273,24.5770330977328,24.8490810751509,14.7304075682297,31.5092532391668,27.3246559926463,21.9226406326606,21.1510291269116,22.9507650078814,29.2708782095743,21.2976932222576,21.7459330935764,29.371819366322,42.6956614539103,32.9515859105479,28.4434858969904,18.6555714738904,16.3620722520513,29.1143213420116,31.3173287003119,31.7710017495897,27.2912988704901,29.6570780871581,25.2759297457342,28.8415843007238,27.9789916009279,29.0049118225847,30.0065025508336,26.1898576635373,24.6923802193542,28.0218412546248,32.5309613497018,32.9154482289999,31.2357418840434,27.8970342238365,32.8482901589062,30.7737673958131,28.4305082516033,28.3538357952797,31.5683653725411,27.0250186553265,28.0571135828869,27.5233242048084,26.9902281709044,28.2369419787086,27.423820889916,27.0069255373598,23.7320049041049,30.4111090979031,30.0819475667618,27.1629431537758,23.3826904266686,25.2735940826259 | |phase1_expression=26.5847086193958,9.42233600626275,12.739978702907,20.5675663688644,15.5277676283368,13.4303417529512,12.3814699515629,53.4570559048126,43.3629264227134,51.9623248434826,48.9683389124944,51.453042551992,56.4962408772979,54.6377515118734,18.3210368998615,18.627724599864,11.1929900500503,56.7831897644828,66.9118435996005,39.4682376172168,21.941168858976,26.6099749218373,32.1275740640891,14.3993180514066,12.15869189656,5.16808767703518,8.61523992318149,10.5580904016086,12.3515222646643,8.82105454159758,11.3082560434205,21.5910428976275,15.9916844771988,0,14.731432607315,11.9688944658114,16.1293791447272,25.9489611056883,15.626706890476,24.6056159667685,50.5879079706672,23.2235464885872,32.0436833000561,36.0064899410151,33.0488795775617,25.8800920547971,7.04152209913235,3.92445281484804,2.41654801007919,4.08302788055995,2.79972843250725,2.87505128729943,44.7979558174156,42.071004236658,41.0034434953806,13.1202312378333,22.9226751951005,15.4701627683233,9.71119012126069,13.2247744818008,9.50747105259269,3.72728985276045,0.889294796111139,2.6996991518442,5.93319817540185,3.5524005747305,3.59520132622086,1.53687322128622,15.1386833970377,10.3954572515402,9.67494822216357,6.56997264128748,8.61387309711293,15.4338407010842,10.3513108699695,11.9498442259303,14.3150645299205,16.7270412891596,16.4358990584181,12.1335384711778,6.40413505216868,13.5437476344758,6.97957497503452,22.5105044012672,22.0029476798607,12.6690291753677,20.5015220350708,15.4711540034999,18.4014649799637,21.3867515102203,48.9870985905835,8.60423876981386,4.0798280022465,4.31762553310254,8.4470934268197,5.82434953226536,9.97155382935438,14.827438064291,8.57293815189467,9.18682893726885,22.8166340038222,10.2661181931454,2.54805239706646,0,12.3399893376392,7.09407623330276,9.60496445528088,12.6744106488157,105.646656528046,25.383605780085,24.1144604204929,22.8349108734106,13.6063143381075,21.2518923179198,28.8092332482477,12.3153259503082,39.0568049020311,25.3048874609845,19.4614321428972,22.1620584427951,21.4216272906582,22.3042616442202,26.0948465705371,22.8369021669007,21.3635640949724,18.3929079750186,17.0137476798407,11.9980546198682,14.8672165675486,26.8125244534633,30.1950397860293,25.8847965352501,28.6810128317256,21.9915293304084,18.7009240103604,24.3361894601636,29.0242186973401,29.1112311227618,28.8103944614389,32.408045806517,37.2144466873333,27.3583504275833,30.2504378072987,35.2649273735573,38.9168775145595,42.661868854855,31.10897255383,45.2730898793277,23.0657752438141,42.1706558774237,45.9232434067907,25.2075092291711,39.2046621408093,35.521720985261,42.3911201000364,46.9720869691644,7.02213187313235,8.74982884190032,8.52490498186778,26.7192246570797,25.3288144779584,26.2890609733082,28.8828577413957,26.3664070541521,29.773552787264,30.9270146518042,16.0964040839772,22.1854150497622,22.5446994381468,25.774291860418,24.0774364351192,21.0527981892479,24.8091630278887,21.4730270016595,28.3891430561572,29.7394329776132,20.8163833279793,13.7514294665043,36.2590025909898,40.6414175755767,37.1138288607629,32.6727309889815,26.9077433052293,22.0661726290569,16.6085171540579,16.9639923365731,21.6148279568232,20.6914730922797,24.7604390641283,18.8752075817387,19.2362864388478,21.5072575114717,11.1904061562318,35.0742933711867,34.9393980586549,45.0069434538145,37.0449250490165,36.6810338026366,34.4639127327202,27.455487524206,21.351826986427,20.7307235388625,8.59712618552732,24.5262305402658,20.2455764966599,25.4094186994885,18.6631311677423,28.7000820105376,17.8238096246994,20.7141218964584,22.2125260681798,18.6701760967895,28.7536413054709,21.9563159124417,16.8500343481863,11.8712072635143,7.71408878144222,7.71909634181387,39.9066890759866,30.887100118589,36.0152597936877,33.1002917261617,32.3872542638133,42.714095647663,39.5152443870783,29.4651808265276,44.9260160702644,39.4207147574819,40.1826017016867,35.8860659227466,34.1916264094473,33.4139325323292,18.0949540727127,18.4927932498361,26.0635064700089,27.0418011378638,21.3532284683763,21.5669503329654,21.4754778443445,19.1877904675323,15.7754109708128,18.350620981942,31.6672394667214,23.8968797952552,30.0778210011232,28.3076530788832,28.3367491172426,26.5952830699294,22.1361155650053,33.4174169078679,40.0271040287317,21.9020692510724,33.7176005861903,44.047022833667,23.8941249011933,26.705869977048,22.9765903293211,36.2121753131324,14.4697927511579,31.9732553861685,32.3035366460276,27.2650297108129,32.7977588113944,36.028190404683,18.9753495434998,31.9720184069379,53.7894577090985,30.6103859853227,6.98536892426874,27.2208034490122,37.0641088312352,34.7819194324038,41.3018041711324,13.3964577610424,29.5686352160275,40.2480934641258,17.642271844397,21.1054403765094,42.1422153676313,35.8861903322527,26.6200327126994,28.2322347561505,23.6099477670179,23.9198639593557,30.4150167820178,28.2750009109615,34.075793036027,22.2274779265535,31.5763666035568,23.7929300134784,21.9272174692073,25.4711643229058,20.5917960968591,5.72802370809068,32.1081033484852,37.2074624842133,37.9098746284522,32.1995975862282,34.0645599444037,27.9169197016579,24.6307298061501,16.7523802869779,22.4233903794802,21.1255366449555,27.0572610568411,35.285904866379,25.3151490399359,37.7235305387452,29.0609602824895,43.5906803766208,37.5543163666413,35.8062058320863,37.6445046488302,39.619795815465,29.3790606383023,46.137623611714,19.0561702372754,29.7861775777999,30.6613142227596,39.027819655511,36.1600065701902,43.6309481757487,45.1929953154206,50.9880572238146,48.6199426458899,48.5982212359571,55.2586183794396,50.222581336252,62.4122657649578,24.713611814058,30.856047518995,18.8399098879899,20.9855770455098,27.2397327585389,27.2139589404214,36.2640216049185,30.4403098292273,24.5770330977328,24.8490810751509,14.7304075682297,31.5092532391668,27.3246559926463,21.9226406326606,21.1510291269116,22.9507650078814,29.2708782095743,21.2976932222576,21.7459330935764,29.371819366322,42.6956614539103,32.9515859105479,28.4434858969904,18.6555714738904,16.3620722520513,29.1143213420116,31.3173287003119,31.7710017495897,27.2912988704901,29.6570780871581,25.2759297457342,28.8415843007238,27.9789916009279,29.0049118225847,30.0065025508336,26.1898576635373,24.6923802193542,28.0218412546248,32.5309613497018,32.9154482289999,31.2357418840434,27.8970342238365,32.8482901589062,30.7737673958131,28.4305082516033,28.3538357952797,31.5683653725411,27.0250186553265,28.0571135828869,27.5233242048084,26.9902281709044,28.2369419787086,27.423820889916,27.0069255373598,23.7320049041049,30.4111090979031,30.0819475667618,27.1629431537758,23.3826904266686,25.2735940826259 | ||
|short_description=p1@Mga | |short_description=p1@Mga | ||
}} | }} |
Revision as of 11:09, 14 November 2012
Short description: | p1@Mga |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mga_5end |
Coexpression cluster: | MCL_coexpression_mm9:614 |
Association with transcript: | 0bp_to_ENSMUST00000046717, ENSMUST00000079934, ENSMUST00000110773, ENSMUST00000110774, ENSMUST00000129405, ENSMUST00000141776, NM_001164274, NM_013720, uc008lus.1, uc008lut.2, uc008luu.1, uc012cbv.1_5end |
EntrezGene: | Mga |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.56e-07 | 13 |
common lymphoid progenitor | 2.56e-07 | 13 |
lymphoid lineage restricted progenitor cell | 5.35e-07 | 12 |
mature alpha-beta T cell | 9.18e-07 | 9 |
alpha-beta T cell | 9.18e-07 | 9 |
immature T cell | 9.18e-07 | 9 |
mature T cell | 9.18e-07 | 9 |
immature alpha-beta T cell | 9.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
anterior region of body | 9.41e-10 | 43 |
respiratory tract | 1.04e-08 | 41 |
respiratory system | 2.53e-08 | 42 |
craniocervical region | 4.06e-08 | 36 |
mixed endoderm/mesoderm-derived structure | 2.52e-07 | 35 |
thymus | 7.57e-07 | 23 |
neck | 7.57e-07 | 23 |
respiratory system epithelium | 7.57e-07 | 23 |
hemolymphoid system gland | 7.57e-07 | 23 |
pharyngeal epithelium | 7.57e-07 | 23 |
thymic region | 7.57e-07 | 23 |
pharyngeal gland | 7.57e-07 | 23 |
entire pharyngeal arch endoderm | 7.57e-07 | 23 |
thymus primordium | 7.57e-07 | 23 |
early pharyngeal endoderm | 7.57e-07 | 23 |
hemopoietic organ | 9.13e-07 | 29 |
immune organ | 9.13e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.