FFCP PHASE1:Mm9::chr11:107278660..107278697,-: Difference between revisions
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|id=chr11:107278660..107278697,- | |id=chr11:107278660..107278697,- | ||
|ontology_enrichment_celltype=CL:0000988!4.44e-13!32;CL:0002032!4.44e-13!32;CL:0000037!4.44e-13!32;CL:0000566!4.44e-13!32;CL:0000837!4.44e-13!32;CL:0000838!5.70e-13!12;CL:0000084!3.38e-12!11;CL:0000827!3.38e-12!11;CL:0000542!9.64e-12!13;CL:0000051!9.64e-12!13;CL:0002031!6.91e-11!25;CL:0000791!3.43e-10!9;CL:0000789!3.43e-10!9;CL:0002420!3.43e-10!9;CL:0002419!3.43e-10!9;CL:0000790!3.43e-10!9;CL:0000738!5.15e-10!17;CL:0002087!5.15e-10!17;CL:0002320!1.75e-09!46;CL:0000134!1.75e-09!46;CL:0000624!8.12e-09!8;CL:0000219!3.34e-07!54 | |ontology_enrichment_celltype=CL:0000988!4.44e-13!32;CL:0002032!4.44e-13!32;CL:0000037!4.44e-13!32;CL:0000566!4.44e-13!32;CL:0000837!4.44e-13!32;CL:0000838!5.70e-13!12;CL:0000084!3.38e-12!11;CL:0000827!3.38e-12!11;CL:0000542!9.64e-12!13;CL:0000051!9.64e-12!13;CL:0002031!6.91e-11!25;CL:0000791!3.43e-10!9;CL:0000789!3.43e-10!9;CL:0002420!3.43e-10!9;CL:0002419!3.43e-10!9;CL:0000790!3.43e-10!9;CL:0000738!5.15e-10!17;CL:0002087!5.15e-10!17;CL:0002320!1.75e-09!46;CL:0000134!1.75e-09!46;CL:0000624!8.12e-09!8;CL:0000219!3.34e-07!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.67e-13,9;CL:0000789,7.67e-13,9;CL:0002420,7.67e-13,9;CL:0002419,7.67e-13,9;CL:0000790,7.67e-13,9;CL:0000084,1.75e-10,11;CL:0000827,1.75e-10,11;CL:0000988,2.38e-10,32;CL:0002032,2.38e-10,32;CL:0000037,2.38e-10,32;CL:0000837,2.38e-10,32;CL:0000838,1.35e-09,12;CL:0000624,1.82e-09,8;CL:0000542,7.58e-09,13;CL:0000051,7.58e-09,13;CL:0002320,7.90e-07,46;CL:0000134,7.90e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.54e-15,3;DOID:4045,1.54e-15,3;DOID:0050686,2.32e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0003408!8.03e-16!24;UBERON:0002370!1.06e-14!23;UBERON:0000974!1.06e-14!23;UBERON:0004807!1.06e-14!23;UBERON:0005058!1.06e-14!23;UBERON:0003351!1.06e-14!23;UBERON:0009113!1.06e-14!23;UBERON:0003295!1.06e-14!23;UBERON:0009722!1.06e-14!23;UBERON:0005562!1.06e-14!23;UBERON:0007690!1.06e-14!23;UBERON:0002390!1.06e-14!45;UBERON:0003061!1.06e-14!45;UBERON:0002193!1.18e-14!48;UBERON:0006562!7.08e-14!24;UBERON:0001557!7.08e-14!24;UBERON:0001042!7.08e-14!24;UBERON:0008814!7.08e-14!24;UBERON:0009145!7.08e-14!24;UBERON:0004177!1.34e-13!29;UBERON:0000072!8.93e-12!27;UBERON:0001004!1.04e-11!42;UBERON:0000065!7.80e-11!41;UBERON:0002384!1.75e-09!46;UBERON:0002405!1.68e-08!70;UBERON:0000063!5.42e-08!35;UBERON:0003081!5.13e-07!88 | |ontology_enrichment_uberon=UBERON:0003408!8.03e-16!24;UBERON:0002370!1.06e-14!23;UBERON:0000974!1.06e-14!23;UBERON:0004807!1.06e-14!23;UBERON:0005058!1.06e-14!23;UBERON:0003351!1.06e-14!23;UBERON:0009113!1.06e-14!23;UBERON:0003295!1.06e-14!23;UBERON:0009722!1.06e-14!23;UBERON:0005562!1.06e-14!23;UBERON:0007690!1.06e-14!23;UBERON:0002390!1.06e-14!45;UBERON:0003061!1.06e-14!45;UBERON:0002193!1.18e-14!48;UBERON:0006562!7.08e-14!24;UBERON:0001557!7.08e-14!24;UBERON:0001042!7.08e-14!24;UBERON:0008814!7.08e-14!24;UBERON:0009145!7.08e-14!24;UBERON:0004177!1.34e-13!29;UBERON:0000072!8.93e-12!27;UBERON:0001004!1.04e-11!42;UBERON:0000065!7.80e-11!41;UBERON:0002384!1.75e-09!46;UBERON:0002405!1.68e-08!70;UBERON:0000063!5.42e-08!35;UBERON:0003081!5.13e-07!88 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.90e-07,46;UBERON:0002370,9.41e-07,23;UBERON:0000974,9.41e-07,23;UBERON:0004807,9.41e-07,23;UBERON:0005058,9.41e-07,23;UBERON:0003351,9.41e-07,23;UBERON:0009113,9.41e-07,23;UBERON:0003295,9.41e-07,23;UBERON:0009722,9.41e-07,23;UBERON:0005562,9.41e-07,23;UBERON:0007690,9.41e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0.281577444303333,0,1.54096171402954,0.478632953972018,1.71200729931206,0.961624426608971,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0,0.297872853602656,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,1.90509202037889,0,0,0,0,0,15.9042019680025,7.0320181007142,13.6116173433188,20.5881020810855,12.9778642142105,16.0218416500281,0,0,0,0,0,0,0,0,0,0.167782606057736,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,1.31796636956512,1.19980546198682,1.27070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0,0.228778173206523,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,1.89606672376907,0,0.205421914329655,0,0.716106782669926,0.596044064343795,0.600977247599844,1.32920574457119,0.807731599585181,0.838274873204998,0.403304740547362,0.194915761479505,1.82802499116626,1.63627663054197,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,1.54947988129892,0.281577444303333,0,1.54096171402954,0.478632953972018,1.71200729931206,0.961624426608971,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0,0.297872853602656,0.261199789138935,0,0,0,0,0,0.190023419456374,0,0,1.90509202037889,0,0,0,0,0,15.9042019680025,7.0320181007142,13.6116173433188,20.5881020810855,12.9778642142105,16.0218416500281,0,0,0,0,0,0,0,0,0,0.167782606057736,3.62681071005672,2.01656279485478,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,1.31796636956512,1.19980546198682,1.27070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0,0.228778173206523,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0.241584120826006,0,1.89606672376907,0,0.205421914329655,0,0.716106782669926,0.596044064343795,0.600977247599844,1.32920574457119,0.807731599585181,0.838274873204998,0.403304740547362,0.194915761479505,1.82802499116626,1.63627663054197,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:107278660..107278697,- | |short_description=p@chr11:107278660..107278697,- | ||
}} | }} |
Revision as of 05:14, 15 November 2012
Short description: | p@chr11:107278660..107278697, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:107278660..107278697, - |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.67e-13 | 9 |
alpha-beta T cell | 7.67e-13 | 9 |
immature T cell | 7.67e-13 | 9 |
mature T cell | 7.67e-13 | 9 |
immature alpha-beta T cell | 7.67e-13 | 9 |
T cell | 1.75e-10 | 11 |
pro-T cell | 1.75e-10 | 11 |
hematopoietic cell | 2.38e-10 | 32 |
hematopoietic oligopotent progenitor cell | 2.38e-10 | 32 |
hematopoietic stem cell | 2.38e-10 | 32 |
hematopoietic multipotent progenitor cell | 2.38e-10 | 32 |
lymphoid lineage restricted progenitor cell | 1.35e-09 | 12 |
CD4-positive, alpha-beta T cell | 1.82e-09 | 8 |
lymphocyte | 7.58e-09 | 13 |
common lymphoid progenitor | 7.58e-09 | 13 |
connective tissue cell | 7.90e-07 | 46 |
mesenchymal cell | 7.90e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.90e-07 | 46 |
thymus | 9.41e-07 | 23 |
neck | 9.41e-07 | 23 |
respiratory system epithelium | 9.41e-07 | 23 |
hemolymphoid system gland | 9.41e-07 | 23 |
pharyngeal epithelium | 9.41e-07 | 23 |
thymic region | 9.41e-07 | 23 |
pharyngeal gland | 9.41e-07 | 23 |
entire pharyngeal arch endoderm | 9.41e-07 | 23 |
thymus primordium | 9.41e-07 | 23 |
early pharyngeal endoderm | 9.41e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.54e-15 | 3 |
muscle cancer | 1.54e-15 | 3 |
organ system cancer | 2.32e-13 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.