FFCP PHASE1:Mm9::chr13:44575688..44575702,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr13:44575688..44575702,- | |id=chr13:44575688..44575702,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.03e-07,19;CL:0000553,1.23e-07,6;CL:0000556,1.23e-07,6;CL:0002092,8.40e-07,3;CL:0002540,8.40e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.77e-07,3;DOID:4045,1.77e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000926!1.86e-08!193;UBERON:0004120!1.86e-08!193;UBERON:0006603!1.86e-08!193;UBERON:0001474!4.70e-07!22;UBERON:0004765!4.70e-07!22;UBERON:0001434!4.70e-07!22 | |ontology_enrichment_uberon=UBERON:0000926!1.86e-08!193;UBERON:0004120!1.86e-08!193;UBERON:0006603!1.86e-08!193;UBERON:0001474!4.70e-07!22;UBERON:0004765!4.70e-07!22;UBERON:0001434!4.70e-07!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.36e-14,22;UBERON:0004765,4.36e-14,22;UBERON:0001434,4.36e-14,22;UBERON:0002204,6.55e-14,32;UBERON:0002371,2.25e-12,16;UBERON:0002106,4.37e-08,6;UBERON:0004457,4.37e-08,6;UBERON:0000042,4.37e-08,6;UBERON:0004854,4.37e-08,6;UBERON:0009034,4.37e-08,6;UBERON:0002095,4.37e-08,6;UBERON:0004782,4.37e-08,6;UBERON:0003281,4.37e-08,6;UBERON:0009664,4.37e-08,6;UBERON:0002296,4.37e-08,6;UBERON:0005602,4.37e-08,6;UBERON:0001179,4.37e-08,6;UBERON:0006293,4.37e-08,6;UBERON:0002193,1.20e-07,48;UBERON:0002405,1.20e-07,48;UBERON:0000926,2.25e-07,120;UBERON:0004120,2.25e-07,120;UBERON:0006603,2.25e-07,120;UBERON:0002390,3.15e-07,45;UBERON:0003061,3.15e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,1.39912375625629,1.41957974411207,2.4680598049033,5.09267582157636,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.409111995798,49.2241267049994,56.0170406051964,124.705075462575,115.434686957977,97.1020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,3.1496490104849,1.97773272513395,2.8419204597844,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0,0,0.186399445825301,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66088190564909,0.593768556259299,0,0,0,0.150722640552623,0,0.125666591329675,0,1.15679485535929,15.9229899350977,0.647067399789637,1.10420759230197,2.90925151881133,0,0,0,1.27728527604296,0.359445373517761,1.19980546198682,1.14363204365758,0,0,0,0,0,0,0,0.101839363850316,1.8661045591514,0.252722758433675,0.841767423545896,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0,2.1066395619397,1.28673953557358,1.70498099637356,0.207125772535502,0.234526059981096,0.180062061461015,0,0.393528463494808,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.438599962275997,1.53685080703735,0.268412837520744,0,0,0.330418782983798,0,0,0,0,0,0,0,1.42358718463353,0,0.502670417600539,0.198956472041151,0.58489226135736,0,1.08069024937347,0.597423819763102,0.379335801906163,0.114248512609729,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0.442830443938806,0.784993639206874,0.370191491765402,0.889357881261447,0,0.196558995113203,0,1.21716072833102,0.72353147925725,1.2731292589071,0.863088412352432,0.162135226775035,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0.538192240565737,0.482443521363367,1.47802552133284,0,0.162964976442026,0.169745085775188,0.469380496577004,0,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0,1.14704320301017,1.20879487306127,1.88043776155965,0,0,1.96705709207614,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,2.14461159864296,0,0,0,0,0,0,0,0,0.712994756769443,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0,0.177340233642274,0,0,0,0,0,0.441056796109924,0.16488625294148,0,0.301564624640779,0.238744688006273,0.164140899745061,0.291480836629851,0,5.29699730473343,3.714963623338,7.40778109478847,0.753473828018764,1.23024804948923,1.14389086603261,0.509935289981566,0.419854356970974,0.690999869022119,0,0,0,0.216010681643603,0,0.655087691238533,0.134864346384821,0.247960367176008,1.04702376793612,0.259229946583586,0.621339313086926,0,0,0,0.388902376688095,0.129159823477731,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0.205421914329655,0.129920822977795,0,0.39736270956253,0,0.147689527174577,0.302899349844443,0,0,0.194915761479505,0.481059208201647,0,0.680191150845634,0,0,0,1.9318959403219,2.25218970541418,0.915758121336325,2.57242054894879,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0,1.37147700954166,0.532427418478012,0.476872379894642,0.436039249896986,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.0985044823755635,0.818462086339379,0,0.385813221962283,0,0.467863216890817,0,0.57386499620653,0.661774257358546,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,1.01237633694913,1.39912375625629,1.41957974411207,2.4680598049033,5.09267582157636,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,54.409111995798,49.2241267049994,56.0170406051964,124.705075462575,115.434686957977,97.1020706062307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0.633831403506179,0,0,3.1496490104849,1.97773272513395,2.8419204597844,0.299600110518405,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0,0,0.186399445825301,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66088190564909,0.593768556259299,0,0,0,0.150722640552623,0,0.125666591329675,0,1.15679485535929,15.9229899350977,0.647067399789637,1.10420759230197,2.90925151881133,0,0,0,1.27728527604296,0.359445373517761,1.19980546198682,1.14363204365758,0,0,0,0,0,0,0,0.101839363850316,1.8661045591514,0.252722758433675,0.841767423545896,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0,2.1066395619397,1.28673953557358,1.70498099637356,0.207125772535502,0.234526059981096,0.180062061461015,0,0.393528463494808,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0.162137619091711,0.438599962275997,1.53685080703735,0.268412837520744,0,0,0.330418782983798,0,0,0,0,0,0,0,1.42358718463353,0,0.502670417600539,0.198956472041151,0.58489226135736,0,1.08069024937347,0.597423819763102,0.379335801906163,0.114248512609729,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0.442830443938806,0.784993639206874,0.370191491765402,0.889357881261447,0,0.196558995113203,0,1.21716072833102,0.72353147925725,1.2731292589071,0.863088412352432,0.162135226775035,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0.538192240565737,0.482443521363367,1.47802552133284,0,0.162964976442026,0.169745085775188,0.469380496577004,0,0.238043640886014,0.195133647857799,0.472905432318573,0.221464689648775,0,1.14704320301017,1.20879487306127,1.88043776155965,0,0,1.96705709207614,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,2.14461159864296,0,0,0,0,0,0,0,0,0.712994756769443,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0,0.177340233642274,0,0,0,0,0,0.441056796109924,0.16488625294148,0,0.301564624640779,0.238744688006273,0.164140899745061,0.291480836629851,0,5.29699730473343,3.714963623338,7.40778109478847,0.753473828018764,1.23024804948923,1.14389086603261,0.509935289981566,0.419854356970974,0.690999869022119,0,0,0,0.216010681643603,0,0.655087691238533,0.134864346384821,0.247960367176008,1.04702376793612,0.259229946583586,0.621339313086926,0,0,0,0.388902376688095,0.129159823477731,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0.205421914329655,0.129920822977795,0,0.39736270956253,0,0.147689527174577,0.302899349844443,0,0,0.194915761479505,0.481059208201647,0,0.680191150845634,0,0,0,1.9318959403219,2.25218970541418,0.915758121336325,2.57242054894879,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0.206035057238894,0.320919209591815,0.505394423527595,0.50695859978048,0,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0,1.37147700954166,0.532427418478012,0.476872379894642,0.436039249896986,0.188218760830661,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.0985044823755635,0.818462086339379,0,0.385813221962283,0,0.467863216890817,0,0.57386499620653,0.661774257358546,0.695603506861264 | ||
|short_description=p@chr13:44575688..44575702,- | |short_description=p@chr13:44575688..44575702,- | ||
}} | }} |
Revision as of 05:35, 15 November 2012
Short description: | p@chr13:44575688..44575702, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:44575688..44575702, - |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.03e-07 | 19 |
megakaryocyte progenitor cell | 1.23e-07 | 6 |
megakaryocyte | 1.23e-07 | 6 |
bone marrow cell | 8.40e-07 | 3 |
mesenchymal stem cell of the bone marrow | 8.40e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone element | 4.36e-14 | 22 |
skeletal element | 4.36e-14 | 22 |
skeletal system | 4.36e-14 | 22 |
musculoskeletal system | 6.55e-14 | 32 |
bone marrow | 2.25e-12 | 16 |
spleen | 4.37e-08 | 6 |
cavity lining | 4.37e-08 | 6 |
serous membrane | 4.37e-08 | 6 |
gastrointestinal system mesentery | 4.37e-08 | 6 |
stomach region | 4.37e-08 | 6 |
mesentery | 4.37e-08 | 6 |
gastrointestinal system serosa | 4.37e-08 | 6 |
mesentery of stomach | 4.37e-08 | 6 |
gut mesentery | 4.37e-08 | 6 |
dorsal mesentery | 4.37e-08 | 6 |
dorsal mesogastrium | 4.37e-08 | 6 |
peritoneal cavity | 4.37e-08 | 6 |
spleen primordium | 4.37e-08 | 6 |
hemolymphoid system | 1.20e-07 | 48 |
immune system | 1.20e-07 | 48 |
mesoderm | 2.25e-07 | 120 |
mesoderm-derived structure | 2.25e-07 | 120 |
presumptive mesoderm | 2.25e-07 | 120 |
hematopoietic system | 3.15e-07 | 45 |
blood island | 3.15e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.77e-07 | 3 |
muscle cancer | 1.77e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.