FFCP PHASE1:Hg19::chr13:98854604..98854613,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000181!2.76e-13!12;CL:0000417!2.76e-13!12;CL:0000668!2.76e-13!12;CL:0000414!2.76e-13!12;CL:0000412!2.76e-13!12;CL:0000182!2.76e-13!12 | |ontology_enrichment_celltype=CL:0000181!2.76e-13!12;CL:0000417!2.76e-13!12;CL:0000668!2.76e-13!12;CL:0000414!2.76e-13!12;CL:0000412!2.76e-13!12;CL:0000182!2.76e-13!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.01e-30;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.01e-30;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.01e-30,12;CL:0000223,5.90e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000223;6.46e-07;58 | |ontology_enrichment_development_v019=CL:0000223;6.46e-07;58 | ||
|ontology_enrichment_disease=DOID:2355!5.26e-18!1;DOID:74!1.12e-09!2 | |ontology_enrichment_disease=DOID:2355!5.26e-18!1;DOID:74!1.12e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:2355;3.30e-40;1!DOID:74;6.96e-21;2!DOID:1287;3.79e-11;4 | |ontology_enrichment_disease_v019=DOID:2355;3.30e-40;1!DOID:74;6.96e-21;2!DOID:1287;3.79e-11;4 | ||
|ontology_enrichment_disease_v019_2=DOID:2355,3.30e-40,1;DOID:74,6.96e-21,2;DOID:1287,3.79e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.61e-14!19;UBERON:0006925!1.61e-14!19;UBERON:0008836!1.61e-14!19;UBERON:0008835!1.38e-12!22;UBERON:0003894!1.38e-12!22;UBERON:0009854!4.73e-12!23;UBERON:0007499!4.11e-11!25;UBERON:0009497!4.11e-11!25;UBERON:0000015!4.11e-11!25;UBERON:0002423!4.11e-11!25;UBERON:0006235!4.11e-11!25;UBERON:0004161!4.11e-11!25;UBERON:0005057!1.07e-10!26;UBERON:0009856!1.07e-10!26;UBERON:0002365!5.14e-09!31;UBERON:0002330!5.14e-09!31;UBERON:0002368!5.16e-08!35;UBERON:0005172!1.23e-07!55;UBERON:0005173!1.23e-07!55;UBERON:0002417!7.01e-07!61;UBERON:0000916!7.01e-07!61 | |ontology_enrichment_uberon=UBERON:0002107!1.61e-14!19;UBERON:0006925!1.61e-14!19;UBERON:0008836!1.61e-14!19;UBERON:0008835!1.38e-12!22;UBERON:0003894!1.38e-12!22;UBERON:0009854!4.73e-12!23;UBERON:0007499!4.11e-11!25;UBERON:0009497!4.11e-11!25;UBERON:0000015!4.11e-11!25;UBERON:0002423!4.11e-11!25;UBERON:0006235!4.11e-11!25;UBERON:0004161!4.11e-11!25;UBERON:0005057!1.07e-10!26;UBERON:0009856!1.07e-10!26;UBERON:0002365!5.14e-09!31;UBERON:0002330!5.14e-09!31;UBERON:0002368!5.16e-08!35;UBERON:0005172!1.23e-07!55;UBERON:0005173!1.23e-07!55;UBERON:0002417!7.01e-07!61;UBERON:0000916!7.01e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.04e-34;19!UBERON:0006925;7.04e-34;19!UBERON:0002423;5.75e-26;25!UBERON:0002365;8.80e-22;31!UBERON:0002330;8.80e-22;31!UBERON:0002368;1.61e-17;33!UBERON:0000949;1.12e-14;43!UBERON:0005172;8.77e-11;52!UBERON:0005173;8.77e-11;52!UBERON:0002530;4.25e-08;57!UBERON:0001007;6.30e-08;81!UBERON:0002417;1.93e-07;58!UBERON:0000916;1.93e-07;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;7.04e-34;19!UBERON:0006925;7.04e-34;19!UBERON:0002423;5.75e-26;25!UBERON:0002365;8.80e-22;31!UBERON:0002330;8.80e-22;31!UBERON:0002368;1.61e-17;33!UBERON:0000949;1.12e-14;43!UBERON:0005172;8.77e-11;52!UBERON:0005173;8.77e-11;52!UBERON:0002530;4.25e-08;57!UBERON:0001007;6.30e-08;81!UBERON:0002417;1.93e-07;58!UBERON:0000916;1.93e-07;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.04e-34,19;UBERON:0006925,7.04e-34,19;UBERON:0008836,7.04e-34,19;UBERON:0008835,2.19e-29,22;UBERON:0003894,2.19e-29,22;UBERON:0009854,3.80e-28,23;UBERON:0007499,5.75e-26,25;UBERON:0009497,5.75e-26,25;UBERON:0000015,5.75e-26,25;UBERON:0002423,5.75e-26,25;UBERON:0006235,5.75e-26,25;UBERON:0004161,5.75e-26,25;UBERON:0009856,5.31e-25,26;UBERON:0002365,4.17e-21,31;UBERON:0002330,4.17e-21,31;UBERON:0002368,8.68e-19,35;UBERON:0000949,8.74e-15,45;UBERON:0003929,1.93e-12,54;UBERON:0005172,1.93e-12,54;UBERON:0005173,1.93e-12,54;UBERON:0002530,1.91e-11,59;UBERON:0002417,2.88e-11,60;UBERON:0000916,2.88e-11,60;UBERON:0005911,2.05e-08,82;UBERON:0001041,5.76e-08,87;UBERON:0005177,6.11e-07,101 | |||
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|short_description=p@chr13:98854604..98854613,+ | |short_description=p@chr13:98854604..98854613,+ | ||
}} | }} |
Revision as of 23:50, 16 November 2012
Short description: | p@chr13:98854604..98854613, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:98854604..98854613, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.01e-30 | 12 |
endodermal cell | 5.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 7.04e-34 | 19 |
digestive gland | 7.04e-34 | 19 |
liver bud | 7.04e-34 | 19 |
hepatic diverticulum | 2.19e-29 | 22 |
liver primordium | 2.19e-29 | 22 |
digestive tract diverticulum | 3.80e-28 | 23 |
epithelial sac | 5.75e-26 | 25 |
epithelium of foregut-midgut junction | 5.75e-26 | 25 |
anatomical boundary | 5.75e-26 | 25 |
hepatobiliary system | 5.75e-26 | 25 |
foregut-midgut junction | 5.75e-26 | 25 |
septum transversum | 5.75e-26 | 25 |
sac | 5.31e-25 | 26 |
exocrine gland | 4.17e-21 | 31 |
exocrine system | 4.17e-21 | 31 |
endocrine gland | 8.68e-19 | 35 |
endocrine system | 8.74e-15 | 45 |
gut epithelium | 1.93e-12 | 54 |
abdomen element | 1.93e-12 | 54 |
abdominal segment element | 1.93e-12 | 54 |
gland | 1.91e-11 | 59 |
abdominal segment of trunk | 2.88e-11 | 60 |
abdomen | 2.88e-11 | 60 |
endo-epithelium | 2.05e-08 | 82 |
foregut | 5.76e-08 | 87 |
trunk region element | 6.11e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.30e-40 | 1 |
hematopoietic system disease | 6.96e-21 | 2 |
cardiovascular system disease | 3.79e-11 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.