FFCP PHASE1:Hg19::chr17:38609343..38609359,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.54e-20!180;CL:0000183!3.32e-15!59;CL:0000222!6.64e-15!119;CL:0000680!2.84e-14!57;CL:0000056!2.84e-14!57;CL:0000355!2.84e-14!57;CL:0000187!5.20e-13!54;CL:0000057!9.30e-12!75;CL:0000192!5.83e-11!42;CL:0000514!5.83e-11!42;CL:0000393!3.88e-10!60;CL:0000211!3.88e-10!60;CL:0000359!3.89e-08!32;CL:0002371!4.15e-07!591 | |ontology_enrichment_celltype=CL:0000055!1.54e-20!180;CL:0000183!3.32e-15!59;CL:0000222!6.64e-15!119;CL:0000680!2.84e-14!57;CL:0000056!2.84e-14!57;CL:0000355!2.84e-14!57;CL:0000187!5.20e-13!54;CL:0000057!9.30e-12!75;CL:0000192!5.83e-11!42;CL:0000514!5.83e-11!42;CL:0000393!3.88e-10!60;CL:0000211!3.88e-10!60;CL:0000359!3.89e-08!32;CL:0002371!4.15e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002540;4.88e-08;6!CL:0000153;5.53e-08;9!CL:0000447;5.53e-08;9!CL:0000136;6.73e-08;13!CL:0002564;5.12e-07;3 | |ontology_enrichment_celltype_v019=CL:0002540;4.88e-08;6!CL:0000153;5.53e-08;9!CL:0000447;5.53e-08;9!CL:0000136;6.73e-08;13!CL:0002564;5.12e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.31e-11,76;CL:0000048,2.32e-08,427;CL:0002320,5.09e-08,361;CL:0002540,5.48e-08,6;CL:0000153,5.60e-08,9;CL:0000447,5.60e-08,9;CL:0000723,5.75e-08,433;CL:0000034,1.83e-07,441;CL:0002564,5.31e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.74e-16!83;UBERON:0002329!3.74e-16!83;UBERON:0003077!3.74e-16!83;UBERON:0003059!3.74e-16!83;UBERON:0007282!3.74e-16!83;UBERON:0009618!3.74e-16!83;UBERON:0007285!3.74e-16!83;UBERON:0002385!4.91e-15!63;UBERON:0001015!4.91e-15!63;UBERON:0000383!4.91e-15!63;UBERON:0004290!7.26e-15!70;UBERON:0005256!8.64e-15!143;UBERON:0001134!1.23e-14!61;UBERON:0002036!1.23e-14!61;UBERON:0003082!1.23e-14!61;UBERON:0002100!1.30e-14!216;UBERON:0000486!8.90e-14!82;UBERON:0000490!9.34e-14!138;UBERON:0002049!2.79e-11!79;UBERON:0007798!2.79e-11!79;UBERON:0004872!5.29e-10!84;UBERON:0003914!8.12e-10!118;UBERON:0001637!5.34e-09!42;UBERON:0003509!5.34e-09!42;UBERON:0004572!5.34e-09!42;UBERON:0001981!2.05e-08!60;UBERON:0007500!2.05e-08!60;UBERON:0004537!2.05e-08!60;UBERON:0006965!2.05e-08!60;UBERON:0000475!2.45e-08!365;UBERON:0004535!2.56e-08!110;UBERON:0000055!3.44e-08!69;UBERON:0001009!5.21e-08!113;UBERON:0000926!5.43e-07!448;UBERON:0004120!5.43e-07!448;UBERON:0006603!5.43e-07!448;UBERON:0003104!7.95e-07!238;UBERON:0009142!7.95e-07!238 | |ontology_enrichment_uberon=UBERON:0000914!3.74e-16!83;UBERON:0002329!3.74e-16!83;UBERON:0003077!3.74e-16!83;UBERON:0003059!3.74e-16!83;UBERON:0007282!3.74e-16!83;UBERON:0009618!3.74e-16!83;UBERON:0007285!3.74e-16!83;UBERON:0002385!4.91e-15!63;UBERON:0001015!4.91e-15!63;UBERON:0000383!4.91e-15!63;UBERON:0004290!7.26e-15!70;UBERON:0005256!8.64e-15!143;UBERON:0001134!1.23e-14!61;UBERON:0002036!1.23e-14!61;UBERON:0003082!1.23e-14!61;UBERON:0002100!1.30e-14!216;UBERON:0000486!8.90e-14!82;UBERON:0000490!9.34e-14!138;UBERON:0002049!2.79e-11!79;UBERON:0007798!2.79e-11!79;UBERON:0004872!5.29e-10!84;UBERON:0003914!8.12e-10!118;UBERON:0001637!5.34e-09!42;UBERON:0003509!5.34e-09!42;UBERON:0004572!5.34e-09!42;UBERON:0001981!2.05e-08!60;UBERON:0007500!2.05e-08!60;UBERON:0004537!2.05e-08!60;UBERON:0006965!2.05e-08!60;UBERON:0000475!2.45e-08!365;UBERON:0004535!2.56e-08!110;UBERON:0000055!3.44e-08!69;UBERON:0001009!5.21e-08!113;UBERON:0000926!5.43e-07!448;UBERON:0004120!5.43e-07!448;UBERON:0006603!5.43e-07!448;UBERON:0003104!7.95e-07!238;UBERON:0009142!7.95e-07!238 | ||
|ontology_enrichment_uberon_v019=UBERON:0004905;2.71e-12;8!UBERON:0000982;2.71e-12;8!UBERON:0004770;2.71e-12;8!UBERON:0004457;4.72e-12;9!UBERON:0000042;4.72e-12;9!UBERON:0011135;1.33e-10;5!UBERON:0002216;1.33e-10;5!UBERON:0011134;1.33e-10;5!UBERON:0002209;1.33e-10;5!UBERON:0002213;1.33e-10;5!UBERON:0007844;1.33e-10;5!UBERON:0011138;1.33e-10;5!UBERON:0001130;1.33e-10;5!UBERON:0001066;1.33e-10;5!UBERON:0001468;1.33e-10;5!UBERON:0003688;3.87e-10;6!UBERON:0002358;3.87e-10;6!UBERON:0003684;3.87e-10;6!UBERON:0001178;3.87e-10;6!UBERON:0005284;2.47e-08;5!UBERON:0004765;3.85e-08;26!UBERON:0001434;2.97e-07;36!UBERON:0002242;5.12e-07;3!UBERON:0000075;5.71e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0004905;2.71e-12;8!UBERON:0000982;2.71e-12;8!UBERON:0004770;2.71e-12;8!UBERON:0004457;4.72e-12;9!UBERON:0000042;4.72e-12;9!UBERON:0011135;1.33e-10;5!UBERON:0002216;1.33e-10;5!UBERON:0011134;1.33e-10;5!UBERON:0002209;1.33e-10;5!UBERON:0002213;1.33e-10;5!UBERON:0007844;1.33e-10;5!UBERON:0011138;1.33e-10;5!UBERON:0001130;1.33e-10;5!UBERON:0001066;1.33e-10;5!UBERON:0001468;1.33e-10;5!UBERON:0003688;3.87e-10;6!UBERON:0002358;3.87e-10;6!UBERON:0003684;3.87e-10;6!UBERON:0001178;3.87e-10;6!UBERON:0005284;2.47e-08;5!UBERON:0004765;3.85e-08;26!UBERON:0001434;2.97e-07;36!UBERON:0002242;5.12e-07;3!UBERON:0000075;5.71e-07;16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,2.84e-12,8;UBERON:0000982,2.84e-12,8;UBERON:0004770,2.84e-12,8;UBERON:0011135,1.37e-10,5;UBERON:0002216,1.37e-10,5;UBERON:0011134,1.37e-10,5;UBERON:0002209,1.37e-10,5;UBERON:0002213,1.37e-10,5;UBERON:0005856,1.37e-10,5;UBERON:0005866,1.37e-10,5;UBERON:0005863,1.37e-10,5;UBERON:0007844,1.37e-10,5;UBERON:0011138,1.37e-10,5;UBERON:0001130,1.37e-10,5;UBERON:0001066,1.37e-10,5;UBERON:0001468,1.37e-10,5;UBERON:0003688,4.54e-10,6;UBERON:0002358,4.54e-10,6;UBERON:0003684,4.54e-10,6;UBERON:0001178,4.54e-10,6;UBERON:0004457,1.49e-08,12;UBERON:0000042,1.49e-08,12;UBERON:0005284,1.63e-08,5;UBERON:0002384,9.81e-08,371;UBERON:0002242,5.31e-07,3;UBERON:0003068,5.31e-07,3;UBERON:0002328,5.31e-07,3;UBERON:0004880,5.31e-07,3;UBERON:0000075,5.85e-07,16 | |||
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| ||
|short_description=p@chr17:38609343..38609359,- | |short_description=p@chr17:38609343..38609359,- | ||
}} | }} |
Revision as of 14:30, 17 November 2012
Short description: | p@chr17:38609343..38609359, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:38609343..38609359, - |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.31e-11 | 76 |
multi fate stem cell | 2.32e-08 | 427 |
connective tissue cell | 5.09e-08 | 361 |
mesenchymal stem cell of the bone marrow | 5.48e-08 | 6 |
GAG secreting cell | 5.60e-08 | 9 |
carbohydrate secreting cell | 5.60e-08 | 9 |
somatic stem cell | 5.75e-08 | 433 |
stem cell | 1.83e-07 | 441 |
nucleus pulposus cell of intervertebral disc | 5.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
articulation | 2.84e-12 | 8 |
skeletal joint | 2.84e-12 | 8 |
articular system | 2.84e-12 | 8 |
intervertebral cartilage | 1.37e-10 | 5 |
symphysis | 1.37e-10 | 5 |
nonsynovial joint | 1.37e-10 | 5 |
fibrous joint | 1.37e-10 | 5 |
cartilaginous joint | 1.37e-10 | 5 |
developing mesenchymal condensation | 1.37e-10 | 5 |
pre-cartilage condensation | 1.37e-10 | 5 |
cartilaginous condensation | 1.37e-10 | 5 |
cartilage element | 1.37e-10 | 5 |
post-cranial axial skeletal system | 1.37e-10 | 5 |
vertebral column | 1.37e-10 | 5 |
intervertebral disk | 1.37e-10 | 5 |
intervertebral joint | 1.37e-10 | 5 |
omentum | 4.54e-10 | 6 |
peritoneum | 4.54e-10 | 6 |
abdominal cavity | 4.54e-10 | 6 |
visceral peritoneum | 4.54e-10 | 6 |
cavity lining | 1.49e-08 | 12 |
serous membrane | 1.49e-08 | 12 |
brain vasculature | 1.63e-08 | 5 |
connective tissue | 9.81e-08 | 371 |
nucleus pulposus | 5.31e-07 | 3 |
axial mesoderm | 5.31e-07 | 3 |
notochord | 5.31e-07 | 3 |
chordamesoderm | 5.31e-07 | 3 |
subdivision of skeletal system | 5.85e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.