FFCP PHASE1:Hg19::chr6:31763283..31763294,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000220!1.86e-15!246;CL:0002321!2.51e-15!248;CL:0000548!2.91e-13!679;CL:0000004!2.91e-13!679;CL:0000255!2.91e-13!679;CL:0000012!3.14e-13!682;CL:0000066!6.49e-13!254;CL:0000055!3.00e-10!180;CL:0000222!5.02e-10!119;CL:0000192!2.54e-08!42;CL:0000514!2.54e-08!42;CL:0000144!7.64e-08!625;CL:0000183!1.55e-07!59;CL:0000003!1.65e-07!722;CL:0000680!2.80e-07!57;CL:0000056!2.80e-07!57;CL:0000355!2.80e-07!57;CL:0000187!5.05e-07!54 | |ontology_enrichment_celltype=CL:0000220!1.86e-15!246;CL:0002321!2.51e-15!248;CL:0000548!2.91e-13!679;CL:0000004!2.91e-13!679;CL:0000255!2.91e-13!679;CL:0000012!3.14e-13!682;CL:0000066!6.49e-13!254;CL:0000055!3.00e-10!180;CL:0000222!5.02e-10!119;CL:0000192!2.54e-08!42;CL:0000514!2.54e-08!42;CL:0000144!7.64e-08!625;CL:0000183!1.55e-07!59;CL:0000003!1.65e-07!722;CL:0000680!2.80e-07!57;CL:0000056!2.80e-07!57;CL:0000355!2.80e-07!57;CL:0000187!5.05e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000359;6.39e-08;32!CL:0000192;7.41e-08;43!CL:0002202;5.83e-07;9!CL:0002632;5.83e-07;9!CL:1000449;6.51e-07;15 | |ontology_enrichment_celltype_v019=CL:0000359;6.39e-08;32!CL:0000192;7.41e-08;43!CL:0002202;5.83e-07;9!CL:0002632;5.83e-07;9!CL:1000449;6.51e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.03e-10,43;CL:0000514,2.03e-10,43;CL:0002321,2.56e-10,250;CL:0000222,1.19e-09,121;CL:0000680,1.91e-08,58;CL:0000056,1.91e-08,58;CL:0000355,1.91e-08,58;CL:0000187,3.70e-08,55;CL:0000359,3.83e-08,32;CL:0000393,2.66e-07,61;CL:0000211,2.66e-07,61;CL:0002202,8.23e-07,9;CL:0002632,8.23e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;7.41e-08;43 | |ontology_enrichment_development_v019=CL:0000514;7.41e-08;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004573!1.01e-09!33;UBERON:0004571!1.01e-09!33;UBERON:0000119!1.34e-09!312;UBERON:0001637!1.87e-09!42;UBERON:0003509!1.87e-09!42;UBERON:0004572!1.87e-09!42;UBERON:0000483!3.69e-09!309;UBERON:0000475!9.10e-09!365;UBERON:0000055!1.31e-08!69;UBERON:0002049!1.80e-08!79;UBERON:0007798!1.80e-08!79;UBERON:0000486!3.28e-08!82;UBERON:0001981!1.40e-07!60;UBERON:0007500!1.40e-07!60;UBERON:0004537!1.40e-07!60;UBERON:0006965!1.40e-07!60;UBERON:0003914!3.17e-07!118;UBERON:0004290!4.23e-07!70;UBERON:0002100!4.95e-07!216 | |ontology_enrichment_uberon=UBERON:0004573!1.01e-09!33;UBERON:0004571!1.01e-09!33;UBERON:0000119!1.34e-09!312;UBERON:0001637!1.87e-09!42;UBERON:0003509!1.87e-09!42;UBERON:0004572!1.87e-09!42;UBERON:0000483!3.69e-09!309;UBERON:0000475!9.10e-09!365;UBERON:0000055!1.31e-08!69;UBERON:0002049!1.80e-08!79;UBERON:0007798!1.80e-08!79;UBERON:0000486!3.28e-08!82;UBERON:0001981!1.40e-07!60;UBERON:0007500!1.40e-07!60;UBERON:0004537!1.40e-07!60;UBERON:0006965!1.40e-07!60;UBERON:0003914!3.17e-07!118;UBERON:0004290!4.23e-07!70;UBERON:0002100!4.95e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.02e-11;33!UBERON:0004571;5.02e-11;33!UBERON:0001637;1.05e-09;42!UBERON:0003509;1.05e-09;42!UBERON:0004572;1.05e-09;42!UBERON:0003914;1.87e-08;74!UBERON:0000947;2.20e-08;21!UBERON:0010191;2.20e-08;21!UBERON:0001737;5.54e-08;9!UBERON:0001557;5.54e-08;9!UBERON:0001851;4.44e-07;15!UBERON:0006555;6.51e-07;15!UBERON:0004819;6.51e-07;15!UBERON:0001285;6.51e-07;15!UBERON:0007684;6.51e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0004573;5.02e-11;33!UBERON:0004571;5.02e-11;33!UBERON:0001637;1.05e-09;42!UBERON:0003509;1.05e-09;42!UBERON:0004572;1.05e-09;42!UBERON:0003914;1.87e-08;74!UBERON:0000947;2.20e-08;21!UBERON:0010191;2.20e-08;21!UBERON:0001737;5.54e-08;9!UBERON:0001557;5.54e-08;9!UBERON:0001851;4.44e-07;15!UBERON:0006555;6.51e-07;15!UBERON:0004819;6.51e-07;15!UBERON:0001285;6.51e-07;15!UBERON:0007684;6.51e-07;15 | ||
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| ||
|short_description=p4@VARS | |short_description=p4@VARS | ||
}} | }} |
Revision as of 17:04, 17 November 2012
Short description: | p4@VARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_VARS_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000440048_5end |
EntrezGene: | VARS |
HGNC: | 12651 |
UniProt: | A2ABF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.03e-10 | 43 |
smooth muscle myoblast | 2.03e-10 | 43 |
embryonic cell | 2.56e-10 | 250 |
mesodermal cell | 1.19e-09 | 121 |
muscle precursor cell | 1.91e-08 | 58 |
myoblast | 1.91e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.91e-08 | 58 |
muscle cell | 3.70e-08 | 55 |
vascular associated smooth muscle cell | 3.83e-08 | 32 |
electrically responsive cell | 2.66e-07 | 61 |
electrically active cell | 2.66e-07 | 61 |
epithelial cell of tracheobronchial tree | 8.23e-07 | 9 |
epithelial cell of lower respiratory tract | 8.23e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
artery | 1.49e-12 | 42 |
arterial blood vessel | 1.49e-12 | 42 |
arterial system | 1.49e-12 | 42 |
systemic artery | 1.50e-12 | 33 |
systemic arterial system | 1.50e-12 | 33 |
epithelial vesicle | 4.82e-10 | 78 |
vessel | 5.22e-10 | 68 |
epithelial tube open at both ends | 4.60e-09 | 59 |
blood vessel | 4.60e-09 | 59 |
blood vasculature | 4.60e-09 | 59 |
vascular cord | 4.60e-09 | 59 |
epithelial tube | 9.08e-09 | 117 |
vasculature | 1.24e-08 | 78 |
vascular system | 1.24e-08 | 78 |
aorta | 1.64e-08 | 21 |
aortic system | 1.64e-08 | 21 |
paraxial mesoderm | 1.80e-08 | 72 |
presumptive paraxial mesoderm | 1.80e-08 | 72 |
larynx | 2.62e-08 | 9 |
multilaminar epithelium | 2.70e-08 | 83 |
somite | 2.96e-08 | 71 |
presomitic mesoderm | 2.96e-08 | 71 |
presumptive segmental plate | 2.96e-08 | 71 |
dermomyotome | 2.96e-08 | 71 |
trunk paraxial mesoderm | 2.96e-08 | 71 |
dense mesenchyme tissue | 3.55e-08 | 73 |
trunk | 3.78e-08 | 199 |
skeletal muscle tissue | 3.52e-07 | 62 |
striated muscle tissue | 3.52e-07 | 62 |
myotome | 3.52e-07 | 62 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.