FFCP PHASE1:Hg19::chr20:34025999..34026045,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!6.25e-30!180;CL:0000057!1.80e-20!75;CL:0000183!3.14e-15!59;CL:0000187!2.71e-13!54;CL:0000680!2.93e-13!57;CL:0000056!2.93e-13!57;CL:0000355!2.93e-13!57;CL:0000192!1.04e-10!42;CL:0000514!1.04e-10!42;CL:0000393!1.90e-10!60;CL:0000211!1.90e-10!60;CL:0000222!8.35e-10!119;CL:0002371!1.91e-09!591;CL:0000144!2.08e-09!625;CL:0000048!2.46e-07!430;CL:0000723!3.92e-07!436 | |ontology_enrichment_celltype=CL:0000055!6.25e-30!180;CL:0000057!1.80e-20!75;CL:0000183!3.14e-15!59;CL:0000187!2.71e-13!54;CL:0000680!2.93e-13!57;CL:0000056!2.93e-13!57;CL:0000355!2.93e-13!57;CL:0000192!1.04e-10!42;CL:0000514!1.04e-10!42;CL:0000393!1.90e-10!60;CL:0000211!1.90e-10!60;CL:0000222!8.35e-10!119;CL:0002371!1.91e-09!591;CL:0000144!2.08e-09!625;CL:0000048!2.46e-07!430;CL:0000723!3.92e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002540;4.82e-09;6!CL:0000499;5.56e-09;28!CL:0002320;2.34e-07;188 | |ontology_enrichment_celltype_v019=CL:0002540;4.82e-09;6!CL:0000499;5.56e-09;28!CL:0002320;2.34e-07;188 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.28e-14,76;CL:0000048,2.02e-11,427;CL:0000723,7.99e-11,433;CL:0000034,4.63e-10,441;CL:0000187,3.40e-09,55;CL:0002540,4.63e-09,6;CL:0000499,5.15e-09,28;CL:0000680,5.25e-09,58;CL:0000056,5.25e-09,58;CL:0000355,5.25e-09,58;CL:0002320,2.15e-08,361;CL:0000393,1.54e-07,61;CL:0000211,1.54e-07,61 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.15e-15!365;UBERON:0000914!5.43e-15!83;UBERON:0002329!5.43e-15!83;UBERON:0003077!5.43e-15!83;UBERON:0003059!5.43e-15!83;UBERON:0007282!5.43e-15!83;UBERON:0009618!5.43e-15!83;UBERON:0007285!5.43e-15!83;UBERON:0004290!2.55e-13!70;UBERON:0001134!7.11e-13!61;UBERON:0002036!7.11e-13!61;UBERON:0003082!7.11e-13!61;UBERON:0002385!1.58e-12!63;UBERON:0001015!1.58e-12!63;UBERON:0000383!1.58e-12!63;UBERON:0005256!2.16e-11!143;UBERON:0000486!2.67e-11!82;UBERON:0000481!4.22e-11!347;UBERON:0001444!1.06e-09!48;UBERON:0003102!1.87e-09!95;UBERON:0000119!2.41e-09!312;UBERON:0000483!9.92e-09!309;UBERON:0002200!4.04e-08!11;UBERON:0006876!4.04e-08!11;UBERON:0002100!2.18e-07!216;UBERON:0001456!3.92e-07!21;UBERON:0002049!6.14e-07!79;UBERON:0007798!6.14e-07!79 | |ontology_enrichment_uberon=UBERON:0000475!2.15e-15!365;UBERON:0000914!5.43e-15!83;UBERON:0002329!5.43e-15!83;UBERON:0003077!5.43e-15!83;UBERON:0003059!5.43e-15!83;UBERON:0007282!5.43e-15!83;UBERON:0009618!5.43e-15!83;UBERON:0007285!5.43e-15!83;UBERON:0004290!2.55e-13!70;UBERON:0001134!7.11e-13!61;UBERON:0002036!7.11e-13!61;UBERON:0003082!7.11e-13!61;UBERON:0002385!1.58e-12!63;UBERON:0001015!1.58e-12!63;UBERON:0000383!1.58e-12!63;UBERON:0005256!2.16e-11!143;UBERON:0000486!2.67e-11!82;UBERON:0000481!4.22e-11!347;UBERON:0001444!1.06e-09!48;UBERON:0003102!1.87e-09!95;UBERON:0000119!2.41e-09!312;UBERON:0000483!9.92e-09!309;UBERON:0002200!4.04e-08!11;UBERON:0006876!4.04e-08!11;UBERON:0002100!2.18e-07!216;UBERON:0001456!3.92e-07!21;UBERON:0002049!6.14e-07!79;UBERON:0007798!6.14e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0006876;5.77e-10;11!UBERON:0001801;2.85e-08;14!UBERON:0004905;3.31e-08;8!UBERON:0000982;3.31e-08;8!UBERON:0004770;3.31e-08;8!UBERON:0011135;3.60e-08;5!UBERON:0002216;3.60e-08;5!UBERON:0011134;3.60e-08;5!UBERON:0002209;3.60e-08;5!UBERON:0002213;3.60e-08;5!UBERON:0007844;3.60e-08;5!UBERON:0011138;3.60e-08;5!UBERON:0001130;3.60e-08;5!UBERON:0001066;3.60e-08;5!UBERON:0001468;3.60e-08;5!UBERON:0002203;1.26e-07;6!UBERON:0001768;1.26e-07;6!UBERON:0002200;1.26e-07;6!UBERON:0001044;2.27e-07;6!UBERON:0003293;2.27e-07;6!UBERON:0003294;2.27e-07;6!UBERON:0010047;2.27e-07;6!UBERON:0003408;2.27e-07;6!UBERON:0000167;2.27e-07;6!UBERON:0002384;2.97e-07;198 | |ontology_enrichment_uberon_v019=UBERON:0006876;5.77e-10;11!UBERON:0001801;2.85e-08;14!UBERON:0004905;3.31e-08;8!UBERON:0000982;3.31e-08;8!UBERON:0004770;3.31e-08;8!UBERON:0011135;3.60e-08;5!UBERON:0002216;3.60e-08;5!UBERON:0011134;3.60e-08;5!UBERON:0002209;3.60e-08;5!UBERON:0002213;3.60e-08;5!UBERON:0007844;3.60e-08;5!UBERON:0011138;3.60e-08;5!UBERON:0001130;3.60e-08;5!UBERON:0001066;3.60e-08;5!UBERON:0001468;3.60e-08;5!UBERON:0002203;1.26e-07;6!UBERON:0001768;1.26e-07;6!UBERON:0002200;1.26e-07;6!UBERON:0001044;2.27e-07;6!UBERON:0003293;2.27e-07;6!UBERON:0003294;2.27e-07;6!UBERON:0010047;2.27e-07;6!UBERON:0003408;2.27e-07;6!UBERON:0000167;2.27e-07;6!UBERON:0002384;2.97e-07;198 | ||
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| ||
|short_description=p1@GDF5 | |short_description=p1@GDF5 | ||
}} | }} |
Revision as of 23:36, 17 November 2012
Short description: | p1@GDF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GDF5_5end |
Coexpression cluster: | C2614_mesenchymal_leiomyoma_mesothelioma_Anulus_Nucleus_Smooth_epithelioid |
Association with transcript: | 0bp_to_ENST00000374369, NM_000557, uc002xck.1_5end |
EntrezGene: | GDF5 |
HGNC: | 4220 |
UniProt: | P43026 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.28e-14 | 76 |
multi fate stem cell | 2.02e-11 | 427 |
somatic stem cell | 7.99e-11 | 433 |
stem cell | 4.63e-10 | 441 |
muscle cell | 3.40e-09 | 55 |
mesenchymal stem cell of the bone marrow | 4.63e-09 | 6 |
stromal cell | 5.15e-09 | 28 |
muscle precursor cell | 5.25e-09 | 58 |
myoblast | 5.25e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.25e-09 | 58 |
connective tissue cell | 2.15e-08 | 361 |
electrically responsive cell | 1.54e-07 | 61 |
electrically active cell | 1.54e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.