FFCP PHASE1:Hg19::chr11:108438997..108439013,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.52e-15;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.52e-15;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.45e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.33e-60;3 | |ontology_enrichment_development_v019=UBERON:0006215;1.33e-60;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.32e-44!57;UBERON:0005068!1.32e-44!57;UBERON:0006241!1.32e-44!57;UBERON:0007135!1.32e-44!57;UBERON:0002616!2.39e-39!59;UBERON:0007023!2.36e-37!115;UBERON:0003075!4.28e-33!86;UBERON:0007284!4.28e-33!86;UBERON:0005743!1.20e-32!86;UBERON:0000955!2.19e-32!69;UBERON:0006238!2.19e-32!69;UBERON:0001017!1.02e-31!82;UBERON:0002346!2.28e-31!90;UBERON:0002020!6.93e-30!34;UBERON:0003528!6.93e-30!34;UBERON:0000073!4.78e-29!94;UBERON:0001016!4.78e-29!94;UBERON:0002791!4.68e-27!33;UBERON:0001893!3.45e-26!34;UBERON:0004733!1.07e-24!12;UBERON:0002028!1.07e-24!12;UBERON:0007277!1.07e-24!12;UBERON:0003076!1.67e-24!15;UBERON:0003057!1.67e-24!15;UBERON:0002780!2.12e-24!41;UBERON:0001890!2.12e-24!41;UBERON:0006240!2.12e-24!41;UBERON:0003080!9.50e-24!42;UBERON:0004732!1.07e-22!13;UBERON:0002619!6.16e-22!22;UBERON:0001869!9.40e-21!32;UBERON:0002298!1.81e-20!8;UBERON:0001950!4.86e-20!20;UBERON:0000033!2.21e-19!123;UBERON:0002680!3.57e-19!9;UBERON:0001895!3.57e-19!9;UBERON:0010092!3.57e-19!9;UBERON:0000956!3.71e-19!25;UBERON:0000203!3.71e-19!25;UBERON:0000153!3.19e-18!129;UBERON:0007811!3.19e-18!129;UBERON:0000025!7.78e-18!194;UBERON:0003056!1.42e-17!61;UBERON:0000988!9.68e-15!3;UBERON:0006331!2.58e-14!3;UBERON:0004121!1.02e-13!169;UBERON:0000924!2.87e-13!173;UBERON:0006601!2.87e-13!173;UBERON:0004111!5.17e-13!241;UBERON:0000200!1.06e-12!6;UBERON:0002308!1.16e-12!9;UBERON:0000125!1.16e-12!9;UBERON:0000477!7.98e-11!286;UBERON:0001870!1.72e-10!2;UBERON:0000483!2.21e-10!309;UBERON:0000119!3.27e-10!312;UBERON:0002148!3.50e-10!2;UBERON:0009662!3.50e-10!2;UBERON:0001872!1.24e-08!5;UBERON:0002037!2.91e-08!6;UBERON:0006215!2.91e-08!6;UBERON:0000475!1.27e-07!365;UBERON:0002771!3.18e-07!3;UBERON:0001896!3.49e-07!3;UBERON:0005290!3.49e-07!3;UBERON:0010096!3.49e-07!3;UBERON:0000064!8.57e-07!219 | |ontology_enrichment_uberon=UBERON:0001049!1.32e-44!57;UBERON:0005068!1.32e-44!57;UBERON:0006241!1.32e-44!57;UBERON:0007135!1.32e-44!57;UBERON:0002616!2.39e-39!59;UBERON:0007023!2.36e-37!115;UBERON:0003075!4.28e-33!86;UBERON:0007284!4.28e-33!86;UBERON:0005743!1.20e-32!86;UBERON:0000955!2.19e-32!69;UBERON:0006238!2.19e-32!69;UBERON:0001017!1.02e-31!82;UBERON:0002346!2.28e-31!90;UBERON:0002020!6.93e-30!34;UBERON:0003528!6.93e-30!34;UBERON:0000073!4.78e-29!94;UBERON:0001016!4.78e-29!94;UBERON:0002791!4.68e-27!33;UBERON:0001893!3.45e-26!34;UBERON:0004733!1.07e-24!12;UBERON:0002028!1.07e-24!12;UBERON:0007277!1.07e-24!12;UBERON:0003076!1.67e-24!15;UBERON:0003057!1.67e-24!15;UBERON:0002780!2.12e-24!41;UBERON:0001890!2.12e-24!41;UBERON:0006240!2.12e-24!41;UBERON:0003080!9.50e-24!42;UBERON:0004732!1.07e-22!13;UBERON:0002619!6.16e-22!22;UBERON:0001869!9.40e-21!32;UBERON:0002298!1.81e-20!8;UBERON:0001950!4.86e-20!20;UBERON:0000033!2.21e-19!123;UBERON:0002680!3.57e-19!9;UBERON:0001895!3.57e-19!9;UBERON:0010092!3.57e-19!9;UBERON:0000956!3.71e-19!25;UBERON:0000203!3.71e-19!25;UBERON:0000153!3.19e-18!129;UBERON:0007811!3.19e-18!129;UBERON:0000025!7.78e-18!194;UBERON:0003056!1.42e-17!61;UBERON:0000988!9.68e-15!3;UBERON:0006331!2.58e-14!3;UBERON:0004121!1.02e-13!169;UBERON:0000924!2.87e-13!173;UBERON:0006601!2.87e-13!173;UBERON:0004111!5.17e-13!241;UBERON:0000200!1.06e-12!6;UBERON:0002308!1.16e-12!9;UBERON:0000125!1.16e-12!9;UBERON:0000477!7.98e-11!286;UBERON:0001870!1.72e-10!2;UBERON:0000483!2.21e-10!309;UBERON:0000119!3.27e-10!312;UBERON:0002148!3.50e-10!2;UBERON:0009662!3.50e-10!2;UBERON:0001872!1.24e-08!5;UBERON:0002037!2.91e-08!6;UBERON:0006215!2.91e-08!6;UBERON:0000475!1.27e-07!365;UBERON:0002771!3.18e-07!3;UBERON:0001896!3.49e-07!3;UBERON:0005290!3.49e-07!3;UBERON:0010096!3.49e-07!3;UBERON:0000064!8.57e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.21e-31;6!UBERON:0004733;4.86e-27;12!UBERON:0002028;4.86e-27;12!UBERON:0004732;5.31e-25;13!UBERON:0002680;8.88e-21;9!UBERON:0001895;8.88e-21;9!UBERON:0002107;7.33e-17;19!UBERON:0006925;7.33e-17;19!UBERON:0002423;6.44e-13;25!UBERON:0002365;7.92e-11;31!UBERON:0002330;7.92e-11;31!UBERON:0002368;8.62e-09;33!UBERON:0001896;6.34e-08;3!UBERON:0005290;6.34e-08;3!UBERON:0000949;1.93e-07;43 | |ontology_enrichment_uberon_v019=UBERON:0002037;9.21e-31;6!UBERON:0004733;4.86e-27;12!UBERON:0002028;4.86e-27;12!UBERON:0004732;5.31e-25;13!UBERON:0002680;8.88e-21;9!UBERON:0001895;8.88e-21;9!UBERON:0002107;7.33e-17;19!UBERON:0006925;7.33e-17;19!UBERON:0002423;6.44e-13;25!UBERON:0002365;7.92e-11;31!UBERON:0002330;7.92e-11;31!UBERON:0002368;8.62e-09;33!UBERON:0001896;6.34e-08;3!UBERON:0005290;6.34e-08;3!UBERON:0000949;1.93e-07;43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.21e-31,6;UBERON:0006215,9.21e-31,6;UBERON:0004733,4.86e-27,12;UBERON:0002028,4.86e-27,12;UBERON:0007277,4.86e-27,12;UBERON:0004732,5.31e-25,13;UBERON:0003076,9.77e-22,15;UBERON:0003057,9.77e-22,15;UBERON:0002680,8.88e-21,9;UBERON:0001895,8.88e-21,9;UBERON:0010092,8.88e-21,9;UBERON:0002107,7.33e-17,19;UBERON:0006925,7.33e-17,19;UBERON:0008836,7.33e-17,19;UBERON:0008835,1.27e-14,22;UBERON:0003894,1.27e-14,22;UBERON:0009854,5.27e-14,23;UBERON:0007499,6.44e-13,25;UBERON:0009497,6.44e-13,25;UBERON:0000015,6.44e-13,25;UBERON:0002423,6.44e-13,25;UBERON:0006235,6.44e-13,25;UBERON:0004161,6.44e-13,25;UBERON:0009856,1.95e-12,26;UBERON:0002365,1.72e-10,31;UBERON:0002330,1.72e-10,31;UBERON:0002368,2.49e-09,35;UBERON:0001896,6.34e-08,3;UBERON:0005290,6.34e-08,3;UBERON:0010096,6.34e-08,3;UBERON:0000949,2.52e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.35813260568156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08376524194607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,22.8872604475625,52.3039899474692,10.6397142823277,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34483573884932,0,0.129282956361551,0.26446520348538,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.976210119215705,0,0,3.10601344303186,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.815636795721981,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,1.96565443335525,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.35813260568156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08376524194607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,22.8872604475625,52.3039899474692,10.6397142823277,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34483573884932,0,0.129282956361551,0.26446520348538,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.976210119215705,0,0,3.10601344303186,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.207471757392654,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0,0.815636795721981,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p6@EXPH5 | |short_description=p6@EXPH5 | ||
}} | }} |
Revision as of 03:02, 18 November 2012
Short description: | p6@EXPH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_EXPH5_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -144bp_to_ENST00000531386_5end |
EntrezGene: | EXPH5 |
HGNC: | 30578 |
UniProt: | E9PIT1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.45e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.21e-31 | 6 |
rhombic lip | 9.21e-31 | 6 |
segmental subdivision of hindbrain | 4.86e-27 | 12 |
hindbrain | 4.86e-27 | 12 |
presumptive hindbrain | 4.86e-27 | 12 |
segmental subdivision of nervous system | 5.31e-25 | 13 |
posterior neural tube | 9.77e-22 | 15 |
chordal neural plate | 9.77e-22 | 15 |
regional part of metencephalon | 8.88e-21 | 9 |
metencephalon | 8.88e-21 | 9 |
future metencephalon | 8.88e-21 | 9 |
liver | 7.33e-17 | 19 |
digestive gland | 7.33e-17 | 19 |
liver bud | 7.33e-17 | 19 |
hepatic diverticulum | 1.27e-14 | 22 |
liver primordium | 1.27e-14 | 22 |
digestive tract diverticulum | 5.27e-14 | 23 |
epithelial sac | 6.44e-13 | 25 |
epithelium of foregut-midgut junction | 6.44e-13 | 25 |
anatomical boundary | 6.44e-13 | 25 |
hepatobiliary system | 6.44e-13 | 25 |
foregut-midgut junction | 6.44e-13 | 25 |
septum transversum | 6.44e-13 | 25 |
sac | 1.95e-12 | 26 |
exocrine gland | 1.72e-10 | 31 |
exocrine system | 1.72e-10 | 31 |
endocrine gland | 2.49e-09 | 35 |
medulla oblongata | 6.34e-08 | 3 |
myelencephalon | 6.34e-08 | 3 |
future myelencephalon | 6.34e-08 | 3 |
endocrine system | 2.52e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.