FFCP PHASE1:Hg19::chr1:36590788..36590803,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000153;9.35e-10;9!CL:0000447;9.35e-10;9!CL:0000138;6.56e-08;6!CL:0000327;5.90e-07;15 | |ontology_enrichment_celltype_v019=CL:0000153;9.35e-10;9!CL:0000447;9.35e-10;9!CL:0000138;6.56e-08;6!CL:0000327;5.90e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,7.92e-10,9;CL:0000447,7.92e-10,9;CL:0000058,5.71e-08,6;CL:0000138,5.71e-08,6;CL:0000327,5.25e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-12!115;UBERON:0003075!1.78e-09!86;UBERON:0007284!1.78e-09!86;UBERON:0002346!1.92e-09!90;UBERON:0000468!1.55e-08!659;UBERON:0000153!1.75e-08!129;UBERON:0007811!1.75e-08!129;UBERON:0003076!3.62e-08!15;UBERON:0003057!3.62e-08!15;UBERON:0000033!1.09e-07!123;UBERON:0004732!7.24e-07!13;UBERON:0007625!7.98e-07!11;UBERON:0000479!9.74e-07!787 | |ontology_enrichment_uberon=UBERON:0007023!1.54e-12!115;UBERON:0003075!1.78e-09!86;UBERON:0007284!1.78e-09!86;UBERON:0002346!1.92e-09!90;UBERON:0000468!1.55e-08!659;UBERON:0000153!1.75e-08!129;UBERON:0007811!1.75e-08!129;UBERON:0003076!3.62e-08!15;UBERON:0003057!3.62e-08!15;UBERON:0000033!1.09e-07!123;UBERON:0004732!7.24e-07!13;UBERON:0007625!7.98e-07!11;UBERON:0000479!9.74e-07!787 | ||
|ontology_enrichment_uberon_v019=UBERON:0002104;2.22e-09;21!UBERON:0001032;3.05e-09;24!UBERON:0004456;3.05e-09;24!UBERON:0007625;1.88e-08;11!UBERON:0001708;2.28e-08;4!UBERON:0008895;2.28e-08;4!UBERON:0000970;3.31e-08;20!UBERON:0000020;3.96e-08;23!UBERON:0001456;1.30e-07;21!UBERON:0000019;5.67e-07;19!UBERON:0000047;5.67e-07;19!UBERON:0004088;5.67e-07;19!UBERON:0010230;5.67e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0002104;2.22e-09;21!UBERON:0001032;3.05e-09;24!UBERON:0004456;3.05e-09;24!UBERON:0007625;1.88e-08;11!UBERON:0001708;2.28e-08;4!UBERON:0008895;2.28e-08;4!UBERON:0000970;3.31e-08;20!UBERON:0000020;3.96e-08;23!UBERON:0001456;1.30e-07;21!UBERON:0000019;5.67e-07;19!UBERON:0000047;5.67e-07;19!UBERON:0004088;5.67e-07;19!UBERON:0010230;5.67e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.72e-09,21;UBERON:0002104,1.72e-09,21;UBERON:0000020,2.41e-09,24;UBERON:0001032,2.41e-09,24;UBERON:0004456,2.41e-09,24;UBERON:0001456,7.72e-09,22;UBERON:0007625,1.67e-08,11;UBERON:0001708,2.26e-08,4;UBERON:0008895,2.26e-08,4;UBERON:0000019,3.39e-08,20;UBERON:0000047,3.39e-08,20;UBERON:0010312,3.39e-08,20;UBERON:0004088,3.39e-08,20;UBERON:0010230,3.39e-08,20;UBERON:0003072,3.39e-08,20;UBERON:0004128,3.39e-08,20;UBERON:0003071,3.39e-08,20;UBERON:0003076,3.91e-08,15;UBERON:0003057,3.91e-08,15;UBERON:0000153,6.04e-07,62;UBERON:0007811,6.04e-07,62 | |||
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| ||
|short_description=p2@COL8A2 | |short_description=p2@COL8A2 | ||
}} | }} |
Revision as of 08:48, 18 November 2012
Short description: | p2@COL8A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_COL8A2_5end |
Coexpression cluster: | C3977_Osteoblast_Chondrocyte_Hair_Macrophage_osteosarcoma_retina_immature |
Association with transcript: | 17bp_to_ENST00000397799_5end |
EntrezGene: | COL8A2 |
HGNC: | 2216 |
UniProt: | P25067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 7.92e-10 | 9 |
carbohydrate secreting cell | 7.92e-10 | 9 |
chondroblast | 5.71e-08 | 6 |
chondrocyte | 5.71e-08 | 6 |
extracellular matrix secreting cell | 5.25e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
eye | 1.72e-09 | 21 |
visual system | 1.72e-09 | 21 |
sense organ | 2.41e-09 | 24 |
sensory system | 2.41e-09 | 24 |
entire sense organ system | 2.41e-09 | 24 |
face | 7.72e-09 | 22 |
pigment epithelium of eye | 1.67e-08 | 11 |
jaw skeleton | 2.26e-08 | 4 |
splanchnocranium | 2.26e-08 | 4 |
camera-type eye | 3.39e-08 | 20 |
simple eye | 3.39e-08 | 20 |
immature eye | 3.39e-08 | 20 |
ocular region | 3.39e-08 | 20 |
eyeball of camera-type eye | 3.39e-08 | 20 |
optic cup | 3.39e-08 | 20 |
optic vesicle | 3.39e-08 | 20 |
eye primordium | 3.39e-08 | 20 |
posterior neural tube | 3.91e-08 | 15 |
chordal neural plate | 3.91e-08 | 15 |
anterior region of body | 6.04e-07 | 62 |
craniocervical region | 6.04e-07 | 62 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.