FFCP PHASE1:Hg19::chr1:43224927..43224940,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.48e-18!180;CL:0000144!7.61e-17!625;CL:0000048!7.92e-16!430;CL:0000723!4.94e-15!436;CL:0002371!5.42e-15!591;CL:0000034!9.53e-15!444;CL:0000548!1.40e-14!679;CL:0000004!1.40e-14!679;CL:0000255!1.40e-14!679;CL:0000012!7.67e-14!682;CL:0000057!4.35e-12!75;CL:0000680!4.32e-10!57;CL:0000056!4.32e-10!57;CL:0000355!4.32e-10!57;CL:0000183!4.92e-10!59;CL:0000003!6.73e-10!722;CL:0000192!1.72e-09!42;CL:0000514!1.72e-09!42;CL:0000187!1.81e-09!54;CL:0000393!4.98e-09!60;CL:0000211!4.98e-09!60;CL:0000222!8.60e-09!119;CL:0002320!2.43e-08!365;CL:0000134!1.26e-07!358;CL:0000219!4.61e-07!390;CL:0000359!4.72e-07!32 | |ontology_enrichment_celltype=CL:0000055!1.48e-18!180;CL:0000144!7.61e-17!625;CL:0000048!7.92e-16!430;CL:0000723!4.94e-15!436;CL:0002371!5.42e-15!591;CL:0000034!9.53e-15!444;CL:0000548!1.40e-14!679;CL:0000004!1.40e-14!679;CL:0000255!1.40e-14!679;CL:0000012!7.67e-14!682;CL:0000057!4.35e-12!75;CL:0000680!4.32e-10!57;CL:0000056!4.32e-10!57;CL:0000355!4.32e-10!57;CL:0000183!4.92e-10!59;CL:0000003!6.73e-10!722;CL:0000192!1.72e-09!42;CL:0000514!1.72e-09!42;CL:0000187!1.81e-09!54;CL:0000393!4.98e-09!60;CL:0000211!4.98e-09!60;CL:0000222!8.60e-09!119;CL:0002320!2.43e-08!365;CL:0000134!1.26e-07!358;CL:0000219!4.61e-07!390;CL:0000359!4.72e-07!32 | ||
|ontology_enrichment_celltype_v019=CL:0000134;5.62e-14;55!CL:0000048;3.24e-12;58!CL:0000723;1.32e-11;61!CL:0000034;3.06e-09;69!CL:0002334;3.83e-09;12!CL:0002569;2.15e-07;6!CL:0002595;9.01e-07;5 | |ontology_enrichment_celltype_v019=CL:0000134;5.62e-14;55!CL:0000048;3.24e-12;58!CL:0000723;1.32e-11;61!CL:0000034;3.06e-09;69!CL:0002334;3.83e-09;12!CL:0002569;2.15e-07;6!CL:0002595;9.01e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.24e-13,427;CL:0000057,1.28e-12,76;CL:0000723,1.68e-12,433;CL:0000034,3.67e-12,441;CL:0002320,5.82e-10,361;CL:0002334,1.82e-09,12;CL:0000134,6.07e-09,354;CL:0002569,9.67e-08,6;CL:0002595,4.92e-07,5;CL:0000219,6.27e-07,386 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.35e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;1.35e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,8.98e-10,14;DOID:120,8.52e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.33e-10!83;UBERON:0002329!6.33e-10!83;UBERON:0003077!6.33e-10!83;UBERON:0003059!6.33e-10!83;UBERON:0007282!6.33e-10!83;UBERON:0009618!6.33e-10!83;UBERON:0007285!6.33e-10!83;UBERON:0004290!5.24e-09!70;UBERON:0001134!8.83e-09!61;UBERON:0002036!8.83e-09!61;UBERON:0003082!8.83e-09!61;UBERON:0002385!2.95e-08!63;UBERON:0001015!2.95e-08!63;UBERON:0000383!2.95e-08!63;UBERON:0000486!9.91e-08!82;UBERON:0002384!1.23e-07!375;UBERON:0001637!2.85e-07!42;UBERON:0003509!2.85e-07!42;UBERON:0004572!2.85e-07!42 | |ontology_enrichment_uberon=UBERON:0000914!6.33e-10!83;UBERON:0002329!6.33e-10!83;UBERON:0003077!6.33e-10!83;UBERON:0003059!6.33e-10!83;UBERON:0007282!6.33e-10!83;UBERON:0009618!6.33e-10!83;UBERON:0007285!6.33e-10!83;UBERON:0004290!5.24e-09!70;UBERON:0001134!8.83e-09!61;UBERON:0002036!8.83e-09!61;UBERON:0003082!8.83e-09!61;UBERON:0002385!2.95e-08!63;UBERON:0001015!2.95e-08!63;UBERON:0000383!2.95e-08!63;UBERON:0000486!9.91e-08!82;UBERON:0002384!1.23e-07!375;UBERON:0001637!2.85e-07!42;UBERON:0003509!2.85e-07!42;UBERON:0004572!2.85e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0003104;1.04e-08;7!UBERON:0009142;1.04e-08;7!UBERON:0004457;3.89e-08;9!UBERON:0000042;3.89e-08;9!UBERON:0003688;1.11e-07;6!UBERON:0002358;1.11e-07;6!UBERON:0003684;1.11e-07;6!UBERON:0001178;1.11e-07;6!UBERON:0003422;2.15e-07;6!UBERON:0003834;9.01e-07;5!UBERON:0001533;9.01e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0003104;1.04e-08;7!UBERON:0009142;1.04e-08;7!UBERON:0004457;3.89e-08;9!UBERON:0000042;3.89e-08;9!UBERON:0003688;1.11e-07;6!UBERON:0002358;1.11e-07;6!UBERON:0003684;1.11e-07;6!UBERON:0001178;1.11e-07;6!UBERON:0003422;2.15e-07;6!UBERON:0003834;9.01e-07;5!UBERON:0001533;9.01e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.75e-09,371;UBERON:0003422,9.67e-08,6;UBERON:0003688,1.04e-07,6;UBERON:0002358,1.04e-07,6;UBERON:0003684,1.04e-07,6;UBERON:0001178,1.04e-07,6;UBERON:0003834,4.92e-07,5;UBERON:0001533,4.92e-07,5 | |||
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| ||
|short_description=p@chr1:43224927..43224940,- | |short_description=p@chr1:43224927..43224940,- | ||
}} | }} |
Revision as of 18:35, 18 November 2012
Short description: | p@chr1:43224927..43224940, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:43224927..43224940, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.24e-13 | 427 |
fibroblast | 1.28e-12 | 76 |
somatic stem cell | 1.68e-12 | 433 |
stem cell | 3.67e-12 | 441 |
connective tissue cell | 5.82e-10 | 361 |
preadipocyte | 1.82e-09 | 12 |
mesenchymal cell | 6.07e-09 | 354 |
mesenchymal stem cell of umbilical cord | 9.67e-08 | 6 |
smooth muscle cell of the subclavian artery | 4.92e-07 | 5 |
motile cell | 6.27e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.75e-09 | 371 |
mesenchyme of umbilical cord | 9.67e-08 | 6 |
omentum | 1.04e-07 | 6 |
peritoneum | 1.04e-07 | 6 |
abdominal cavity | 1.04e-07 | 6 |
visceral peritoneum | 1.04e-07 | 6 |
thoracic segment blood vessel | 4.92e-07 | 5 |
subclavian artery | 4.92e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.98e-10 | 14 |
female reproductive organ cancer | 8.52e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.