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UBERON:0003834

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Name:thoracic segment blood vessel
Namespace:FANTOM
Definition:"A blood vessel that is part of a thorax [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0000558
Synonyms: "blood vessel of thorax" EXACT [OBOL:automatic]
"thorax blood vessel" EXACT [OBOL:automatic]
"upper body blood vessel" RELATED [MA:0000558]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0003513(trunk blood vessel)
part_of:UBERON:0000915(thoracic segment of trunk)



Children

is a:UBERON:0003498 (heart blood vessel)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
  • 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
  • 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
  • 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
  • 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
  • 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003834 (thoracic segment blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data