UBERON:0003513
From FANTOM5_SSTAR
Name: | trunk blood vessel | ||
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Namespace: | FANTOM | ||
Definition: | "A blood vessel that is part of a trunk [Obol]." [OBOL:automatic] | ||
Xrefs: |
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Synonyms: |
"blood vessel of torso" EXACT [OBOL:automatic] "blood vessel of trunk" EXACT [OBOL:automatic] "torso blood vessel" EXACT [OBOL:automatic] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0001981(blood vessel) |
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part_of: | UBERON:0002100(trunk) |
Children
is a: | UBERON:0003834 (thoracic segment blood vessel),UBERON:0003835 (abdominal segment blood vessel),UBERON:0005622 (right dorsal aorta),UBERON:0005805 (dorsal aorta) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
... further results Mouse (Mus musculus)
- 11287-116I9 (Smooth Muscle Cells - Internal Thoracic Artery, donor1)
- 11289-117A2 (Smooth Muscle Cells - Subclavian Artery, donor1)
- 11364-117I5 (Smooth Muscle Cells - Internal Thoracic Artery, donor2)
- 11366-117I7 (Smooth Muscle Cells - Subclavian Artery, donor2)
- 11436-118H5 (Smooth Muscle Cells - Internal Thoracic Artery, donor3)
- 11438-118H7 (Smooth Muscle Cells - Subclavian Artery, donor3)
- 11521-119H9 (Hepatic Sinusoidal Endothelial Cells, donor1)
- 11601-120H8 (Hepatic Sinusoidal Endothelial Cells, donor2)
- 11682-122H8 (Hepatic Sinusoidal Endothelial Cells, donor3)
- 11830-124G3 (Mouse hepatic Sinusoidal Endothelial Cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003513 (trunk blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data