FFCP PHASE1:Hg19::chr4:40517945..40517950,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000077!1.78e-13!19;CL:0000066!5.71e-09!254;CL:0002097!9.83e-07!2 | |ontology_enrichment_celltype=CL:0000077!1.78e-13!19;CL:0000066!5.71e-09!254;CL:0002097!9.83e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000239;1.41e-09;3!CL:1000615;1.41e-09;3!CL:0002306;1.41e-09;3!CL:1000497;8.84e-07;17!CL:0002518;8.84e-07;17 | |ontology_enrichment_celltype_v019=CL:0000239;1.41e-09;3!CL:1000615;1.41e-09;3!CL:0002306;1.41e-09;3!CL:1000497;8.84e-07;17!CL:0002518;8.84e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.81e-09,3;CL:1000615,1.81e-09,3;CL:0002306,1.81e-09,3;CL:1000497,9.10e-07,17;CL:0002518,9.10e-07,17 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.41e-12!235;DOID:305!4.29e-12!106;DOID:14566!4.30e-12!239;DOID:0050687!1.43e-10!143;DOID:299!1.08e-07!25;DOID:170!1.12e-07!6;DOID:4468!4.10e-07!2;DOID:3493!5.34e-07!2 | |ontology_enrichment_disease=DOID:162!1.41e-12!235;DOID:305!4.29e-12!106;DOID:14566!4.30e-12!239;DOID:0050687!1.43e-10!143;DOID:299!1.08e-07!25;DOID:170!1.12e-07!6;DOID:4468!4.10e-07!2;DOID:3493!5.34e-07!2 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.07e-09!35;UBERON:0005172!3.70e-09!55;UBERON:0005173!3.70e-09!55;UBERON:0000160!7.83e-09!27;UBERON:0002417!6.75e-08!61;UBERON:0000916!6.75e-08!61;UBERON:0000059!8.83e-07!11 | |ontology_enrichment_uberon=UBERON:0005409!3.07e-09!35;UBERON:0005172!3.70e-09!55;UBERON:0005173!3.70e-09!55;UBERON:0000160!7.83e-09!27;UBERON:0002417!6.75e-08!61;UBERON:0000916!6.75e-08!61;UBERON:0000059!8.83e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;6.64e-21;4!UBERON:0000160;3.93e-13;17!UBERON:0005409;1.99e-10;22!UBERON:0006853;1.41e-09;3!UBERON:0007685;1.41e-09;3!UBERON:0004134;1.41e-09;3!UBERON:0002114;1.41e-09;2 | |ontology_enrichment_uberon_v019=UBERON:0002108;6.64e-21;4!UBERON:0000160;3.93e-13;17!UBERON:0005409;1.99e-10;22!UBERON:0006853;1.41e-09;3!UBERON:0007685;1.41e-09;3!UBERON:0004134;1.41e-09;3!UBERON:0002114;1.41e-09;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,8.13e-21,4;UBERON:0000160,3.77e-13,17;UBERON:0002114,1.67e-09,2;UBERON:0006853,1.81e-09,3;UBERON:0007685,1.81e-09,3;UBERON:0004134,1.81e-09,3;UBERON:0005409,2.59e-09,25 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0.902399225814824,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,1.01950509218015,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0.569261198172555,0,0.421996129056054,0.816164040795739,0.565412285735763,0,1.99052386215701,0.973033209536731,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.164230914106418,0,0.0882561266915003,0,0,0,0,0,0,0.426905989478705,0,0.144090417154106,0,0,0.432164393964449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0,0,0.244736704506468,0,0,0.219284049578707,0.176689145945881,1.3503982678964,0.168942440653073,0.512483037175893,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0.560544326627578,0,1.94334832096759,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0.609589624911347,0,0,0,0,0,0,0,0,0,0,3.16414048242573,0.874238242015829,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p34@RBM47 | |short_description=p34@RBM47 | ||
}} | }} |
Revision as of 09:26, 19 November 2012
Short description: | p34@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_34_at_RBM47_5end |
Coexpression cluster: | C4410_small_Mesothelial_signet_kidney_colon_mesothelioma_bile |
Association with transcript: | 39bp_to_ENST00000381795, NM_019027, uc003gvd.2_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | A0AV96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.81e-09 | 3 |
kidney cortex tubule cell | 1.81e-09 | 3 |
epithelial cell of proximal tubule | 1.81e-09 | 3 |
kidney cell | 9.10e-07 | 17 |
kidney epithelial cell | 9.10e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
small intestine | 8.13e-21 | 4 |
intestine | 3.77e-13 | 17 |
duodenum | 1.67e-09 | 2 |
renal cortex tubule | 1.81e-09 | 3 |
region of nephron tubule | 1.81e-09 | 3 |
proximal tubule | 1.81e-09 | 3 |
gastrointestinal system | 2.59e-09 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.