FFCP PHASE1:Hg19::chr2:189856903..189856926,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!7.20e-24!180;CL:0000057!4.59e-18!75;CL:0000187!6.14e-13!54;CL:0000183!1.60e-12!59;CL:0000680!2.62e-12!57;CL:0000056!2.62e-12!57;CL:0000355!2.62e-12!57;CL:0000048!3.58e-11!430;CL:0000723!2.23e-10!436;CL:0000393!2.70e-10!60;CL:0000211!2.70e-10!60;CL:0000034!1.26e-09!444;CL:0000192!6.79e-09!42;CL:0000514!6.79e-09!42;CL:0002494!2.26e-08!16;CL:0002334!1.69e-07!12;CL:0002570!3.53e-07!8;CL:0000136!5.50e-07!15 | |ontology_enrichment_celltype=CL:0000055!7.20e-24!180;CL:0000057!4.59e-18!75;CL:0000187!6.14e-13!54;CL:0000183!1.60e-12!59;CL:0000680!2.62e-12!57;CL:0000056!2.62e-12!57;CL:0000355!2.62e-12!57;CL:0000048!3.58e-11!430;CL:0000723!2.23e-10!436;CL:0000393!2.70e-10!60;CL:0000211!2.70e-10!60;CL:0000034!1.26e-09!444;CL:0000192!6.79e-09!42;CL:0000514!6.79e-09!42;CL:0002494!2.26e-08!16;CL:0002334!1.69e-07!12;CL:0002570!3.53e-07!8;CL:0000136!5.50e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000134;3.36e-14;55!CL:0000723;4.15e-13;61!CL:0000048;1.17e-12;58!CL:0000349;2.32e-10;19!CL:0000034;4.27e-09;69!CL:0002570;6.02e-08;8!CL:0002334;1.52e-07;12!CL:0002569;1.55e-07;6!CL:0002494;5.50e-07;16 | |ontology_enrichment_celltype_v019=CL:0000134;3.36e-14;55!CL:0000723;4.15e-13;61!CL:0000048;1.17e-12;58!CL:0000349;2.32e-10;19!CL:0000034;4.27e-09;69!CL:0002570;6.02e-08;8!CL:0002334;1.52e-07;12!CL:0002569;1.55e-07;6!CL:0002494;5.50e-07;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.91e-15,76;CL:0000048,6.60e-12,427;CL:0000723,2.60e-11,433;CL:0000034,1.50e-10,441;CL:0000349,2.68e-10,19;CL:0002320,1.89e-09,361;CL:0000134,3.91e-08,354;CL:0002570,4.48e-08,8;CL:0000136,8.13e-08,15;CL:0002569,1.01e-07,6;CL:0002334,1.06e-07,12;CL:0002494,3.90e-07,16 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.59e-08!14 | |ontology_enrichment_disease=DOID:2394!1.59e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;4.45e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;4.45e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.55e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.39e-13!70;UBERON:0002385!3.63e-13!63;UBERON:0001015!3.63e-13!63;UBERON:0000383!3.63e-13!63;UBERON:0001134!9.85e-13!61;UBERON:0002036!9.85e-13!61;UBERON:0003082!9.85e-13!61;UBERON:0000914!2.11e-12!83;UBERON:0002329!2.11e-12!83;UBERON:0003077!2.11e-12!83;UBERON:0003059!2.11e-12!83;UBERON:0007282!2.11e-12!83;UBERON:0009618!2.11e-12!83;UBERON:0007285!2.11e-12!83;UBERON:0000486!1.71e-10!82;UBERON:0000478!1.51e-09!24;UBERON:0001013!1.11e-08!14;UBERON:0005256!2.40e-08!143;UBERON:0000948!2.64e-08!24;UBERON:0005498!2.64e-08!24;UBERON:0004140!2.64e-08!24;UBERON:0009881!2.64e-08!24;UBERON:0004141!2.64e-08!24;UBERON:0003084!2.64e-08!24;UBERON:0007005!2.64e-08!24;UBERON:0004139!2.64e-08!24;UBERON:0004291!2.64e-08!24;UBERON:0004872!3.76e-08!84;UBERON:0007100!4.25e-08!27;UBERON:0005631!4.69e-07!14;UBERON:0000158!4.69e-07!14;UBERON:0004923!5.31e-07!57 | |ontology_enrichment_uberon=UBERON:0004290!2.39e-13!70;UBERON:0002385!3.63e-13!63;UBERON:0001015!3.63e-13!63;UBERON:0000383!3.63e-13!63;UBERON:0001134!9.85e-13!61;UBERON:0002036!9.85e-13!61;UBERON:0003082!9.85e-13!61;UBERON:0000914!2.11e-12!83;UBERON:0002329!2.11e-12!83;UBERON:0003077!2.11e-12!83;UBERON:0003059!2.11e-12!83;UBERON:0007282!2.11e-12!83;UBERON:0009618!2.11e-12!83;UBERON:0007285!2.11e-12!83;UBERON:0000486!1.71e-10!82;UBERON:0000478!1.51e-09!24;UBERON:0001013!1.11e-08!14;UBERON:0005256!2.40e-08!143;UBERON:0000948!2.64e-08!24;UBERON:0005498!2.64e-08!24;UBERON:0004140!2.64e-08!24;UBERON:0009881!2.64e-08!24;UBERON:0004141!2.64e-08!24;UBERON:0003084!2.64e-08!24;UBERON:0007005!2.64e-08!24;UBERON:0004139!2.64e-08!24;UBERON:0004291!2.64e-08!24;UBERON:0004872!3.76e-08!84;UBERON:0007100!4.25e-08!27;UBERON:0005631!4.69e-07!14;UBERON:0000158!4.69e-07!14;UBERON:0004923!5.31e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.96e-09;14!UBERON:0000478;7.54e-09;24!UBERON:0003104;2.17e-08;7!UBERON:0009142;2.17e-08;7!UBERON:0004457;2.53e-08;9!UBERON:0000042;2.53e-08;9!UBERON:0003688;3.65e-08;6!UBERON:0002358;3.65e-08;6!UBERON:0003684;3.65e-08;6!UBERON:0001178;3.65e-08;6!UBERON:0003422;1.55e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001013;2.96e-09;14!UBERON:0000478;7.54e-09;24!UBERON:0003104;2.17e-08;7!UBERON:0009142;2.17e-08;7!UBERON:0004457;2.53e-08;9!UBERON:0000042;2.53e-08;9!UBERON:0003688;3.65e-08;6!UBERON:0002358;3.65e-08;6!UBERON:0003684;3.65e-08;6!UBERON:0001178;3.65e-08;6!UBERON:0003422;1.55e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.04e-09,371;UBERON:0001013,2.11e-09,14;UBERON:0000478,8.49e-09,24;UBERON:0003688,5.05e-08,6;UBERON:0002358,5.05e-08,6;UBERON:0003684,5.05e-08,6;UBERON:0001178,5.05e-08,6;UBERON:0003422,1.01e-07,6 | |||
|phase1_expression=4.54195948176392,12.203729861786,5.49722175974288,18.0131937035635,22.3480547213644,10.4680622892044,2.53299878168311,0.631719873426831,1.56711376919903,0.245733936501509,0,1.74753097704138,3.4289707169699,1.23766352960047,1.98838425436749,2.01697543935533,0.602694528023977,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,4.69490601792545,0.639312809217652,0.722878304769133,1.50401373190767,2.89693037921647,0.795285947051099,12.1658717575659,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.25326102332916,2.38336525463794,8.60509862246441,2.12801029319014,2.24271040056923,2.1349799145941,1.72667283892012,1.8672662123986,2.15537075311501,3.43269996538263,2.8757911252537,1.72852777344,0,0,0,0.149448680551801,0.587172493218824,0.485618833104395,0.140450806702248,0.204154171254893,0,0.413303124703062,0,2.22540236350701,2.73048408581408,5.03032699271367,0,0,0,0,1.83892677479412,2.25357088359895,0.453728732640084,0.717558542755448,0.85422955527427,2.33125091275518,0.600182192168805,1.64884046781502,1.8034837803194,1.48893485065272,1.5189869901714,0.194874010322397,1.26216887122057,1.19664868234989,3.07127507955743,1.42003837006646,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,3.12899064659632,4.5026865673502,0,3.25057549622385,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,4.115740113314,4.41026134156626,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0.07333828582095,1.93907573636667,3.57656445851882,2.535908257668,1.06375246633948,1.04007436911366,0,0,0.266422179016099,2.85955987316295,17.9065129779176,3.29296134712308,0.65147236858747,3.909311436168,3.16780749173372,1.20575750823834,0,1.3996218765488,0,0,0,2.87549826589899,4.59447743336456,0,0,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981531933753119,0.500170521059677,1.08506009479894,6.44709670745502,4.46072471992904,1.41932173530541,2.10854546986884,1.20378439891088,11.3703752027992,0,0.664225598535437,0.368738337083406,0.521301686808497,1.17480694477644,6.17658162859541,0,0,0,0.303127571446259,3.32870879020994,1.81434175997808,1.98486246255021,1.68808170616869,10.6650835884568,2.81906128362542,1.02341449813341,5.30817939773905,1.48418066444991,1.69630663182921,2.30830242907065,0.410635780069046,0.519254429183621,1.74315567689939,0,0,0,1.7222167224691,3.45973219212762,3.01586154406675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,8.03419649220798,0.290012154876366,1.54048617114644,0.767518373630648,0.689182862422653,1.28904293841928,4.20548412351263,1.27839941124151,3.02708921198907,0,0,0,0,0,5.35180989612088,0,0.924100740528266,0,0,0.37064843820784,1.14499909393593,0.744316738719335,0.949138274156178,4.38449446024797,0.255897791311334,2.1396949401696,0.636406495851874,0.78494864019923,1.61885211824983,11.8050922786504,3.76999687506197,0.404364963146632,0,0.421258456238981,3.41343617362713,2.43713489631284,0,1.22849920267187,9.89838023675989,4.52032466480971,0.551365343546124,1.32687795048244,0.876901770507525,0,0.655894752046633,0.202910376962704,0,1.40847801266121,1.43411352204052,1.8667317792493,0,0,1.26664581178598,2.96365403663912,0.379473173765715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,3.26661148915902,0.921482106297696,0,0,0,0,0,1.19548792950642,0,0,0,0,1.86623752597084,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.692552326534174,1.02547850262301,0,0,0,0.31900115973192,1.09917112082235,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,13.6438200040794,0,0,0,0,0.789168805698781,4.83962864194656,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,2.93774963014692,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.271808412147228,0.836822770498666,0,0.288950589901519,0,0,0,3.0083580899397,0,2.23425921017803,0,0,0.199679000498991,0,0.446342914883745,0.335917362433631,5.76479813667846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,1.32418394073086,0.25426853765475,1.08599920350743,1.72844298240254,2.28611152076586,0,0,3.23737241392301,0,0,0,0,0,0,0,0,0.628817220398664,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,5.82093731258809,3.97312626740282,7.76728206103659,0.378806010550178,2.0125432140206,13.347168323948,0.686520205190771,7.25908434063547,6.68379962505956,1.77426179987561,1.59296767163702,0.449803112163605,0.621051827505038,3.7323558705677,4.78515086204391,4.17396049449387,10.5180326298053,10.2817407285575,3.661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|short_description=p@chr2:189856903..189856926,+ | |short_description=p@chr2:189856903..189856926,+ | ||
}} | }} |
Revision as of 02:33, 21 November 2012
Short description: | p@chr2:189856903..189856926, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:189856903..189856926, + |
Coexpression cluster: | C292_Mesenchymal_skin_umbilical_Adipocyte_mesenchymal_Chondrocyte_skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.91e-15 | 76 |
multi fate stem cell | 6.60e-12 | 427 |
somatic stem cell | 2.60e-11 | 433 |
stem cell | 1.50e-10 | 441 |
extraembryonic cell | 2.68e-10 | 19 |
connective tissue cell | 1.89e-09 | 361 |
mesenchymal cell | 3.91e-08 | 354 |
mesenchymal stem cell of adipose | 4.48e-08 | 8 |
fat cell | 8.13e-08 | 15 |
mesenchymal stem cell of umbilical cord | 1.01e-07 | 6 |
preadipocyte | 1.06e-07 | 12 |
cardiocyte | 3.90e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.04e-09 | 371 |
adipose tissue | 2.11e-09 | 14 |
extraembryonic structure | 8.49e-09 | 24 |
omentum | 5.05e-08 | 6 |
peritoneum | 5.05e-08 | 6 |
abdominal cavity | 5.05e-08 | 6 |
visceral peritoneum | 5.05e-08 | 6 |
mesenchyme of umbilical cord | 1.01e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.55e-09 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.