FFCP PHASE1:Hg19::chr2:56144922..56144937,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002139!3.53e-17!24;CL:0000222!2.93e-16!119;CL:0000213!3.58e-16!57;CL:0000215!3.58e-16!57;CL:0000057!3.49e-12!75;CL:0002078!8.81e-12!44;CL:0000071!9.81e-12!18;CL:0002546!9.81e-12!18;CL:0000076!3.02e-11!62;CL:0000055!1.70e-10!180;CL:0000115!2.03e-10!35;CL:1000413!2.40e-07!9;CL:0000220!2.51e-07!246;CL:0005020!3.20e-07!6;CL:0002138!3.20e-07!6;CL:0005022!3.20e-07!6;CL:0002321!4.20e-07!248 | |ontology_enrichment_celltype=CL:0002139!3.53e-17!24;CL:0000222!2.93e-16!119;CL:0000213!3.58e-16!57;CL:0000215!3.58e-16!57;CL:0000057!3.49e-12!75;CL:0002078!8.81e-12!44;CL:0000071!9.81e-12!18;CL:0002546!9.81e-12!18;CL:0000076!3.02e-11!62;CL:0000055!1.70e-10!180;CL:0000115!2.03e-10!35;CL:1000413!2.40e-07!9;CL:0000220!2.51e-07!246;CL:0005020!3.20e-07!6;CL:0002138!3.20e-07!6;CL:0005022!3.20e-07!6;CL:0002321!4.20e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.08e-38;24!CL:0000071;2.73e-24;18!CL:0000115;2.31e-20;36!CL:0002078;1.04e-16;45!CL:0002138;1.55e-16;6!CL:0000153;2.93e-12;9!CL:0000447;2.93e-12;9!CL:0000327;4.71e-12;15!CL:0000213;7.69e-12;58!CL:0000215;7.69e-12;58!CL:0002543;8.67e-12;6!CL:1000413;4.13e-11;9!CL:0002580;2.72e-09;3!CL:0000499;3.75e-09;28!CL:0002618;6.04e-09;3!CL:0000138;1.65e-08;6!CL:0002544;8.18e-08;6!CL:1000306;3.99e-07;4!CL:0002547;3.99e-07;4!CL:0002545;7.41e-07;2 | |ontology_enrichment_celltype_v019=CL:0002139;2.08e-38;24!CL:0000071;2.73e-24;18!CL:0000115;2.31e-20;36!CL:0002078;1.04e-16;45!CL:0002138;1.55e-16;6!CL:0000153;2.93e-12;9!CL:0000447;2.93e-12;9!CL:0000327;4.71e-12;15!CL:0000213;7.69e-12;58!CL:0000215;7.69e-12;58!CL:0002543;8.67e-12;6!CL:1000413;4.13e-11;9!CL:0002580;2.72e-09;3!CL:0000499;3.75e-09;28!CL:0002618;6.04e-09;3!CL:0000138;1.65e-08;6!CL:0002544;8.18e-08;6!CL:1000306;3.99e-07;4!CL:0002547;3.99e-07;4!CL:0002545;7.41e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.96e-38,24;CL:0000071,4.81e-24,18;CL:0002546,4.81e-24,18;CL:0000115,1.03e-23,36;CL:0002078,7.25e-23,45;CL:0000213,1.57e-22,58;CL:0000215,1.57e-22,58;CL:0005020,1.58e-16,6;CL:0002138,1.58e-16,6;CL:0005022,1.58e-16,6;CL:0000057,4.77e-14,76;CL:0000153,3.03e-12,9;CL:0000447,3.03e-12,9;CL:0000327,4.64e-12,15;CL:0002543,9.55e-12,6;CL:0000222,1.47e-11,121;CL:1000413,5.08e-11,9;CL:0002580,1.28e-09,3;CL:0000499,3.55e-09,28;CL:0002618,3.94e-09,3;CL:0000058,1.70e-08,6;CL:0000138,1.70e-08,6;CL:0000076,7.02e-08,63;CL:0002544,1.19e-07,6;CL:1000306,5.94e-07,4;CL:0002547,5.94e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;2.73e-24;18!CL:0005022;1.55e-16;6 | |ontology_enrichment_development_v019=CL:0002546;2.73e-24;18!CL:0005022;1.55e-16;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.14e-17!79;UBERON:0007798!5.14e-17!79;UBERON:0004535!7.06e-17!110;UBERON:0001009!1.36e-16!113;UBERON:0004872!1.26e-15!84;UBERON:0000055!4.61e-15!69;UBERON:0006914!1.05e-12!25;UBERON:0001981!3.12e-12!60;UBERON:0007500!3.12e-12!60;UBERON:0004537!3.12e-12!60;UBERON:0006965!3.12e-12!60;UBERON:0001986!9.81e-12!18;UBERON:0004638!9.81e-12!18;UBERON:0004852!9.81e-12!18;UBERON:0003914!2.89e-11!118;UBERON:0000487!3.10e-10!22;UBERON:0000490!1.03e-09!138;UBERON:0001637!2.35e-08!42;UBERON:0003509!2.35e-08!42;UBERON:0004572!2.35e-08!42;UBERON:0000477!1.37e-07!286;UBERON:0000947!2.27e-07!21;UBERON:0010191!2.27e-07!21;UBERON:0003915!2.40e-07!9;UBERON:0004700!2.40e-07!9;UBERON:0001917!2.40e-07!9 | |ontology_enrichment_uberon=UBERON:0002049!5.14e-17!79;UBERON:0007798!5.14e-17!79;UBERON:0004535!7.06e-17!110;UBERON:0001009!1.36e-16!113;UBERON:0004872!1.26e-15!84;UBERON:0000055!4.61e-15!69;UBERON:0006914!1.05e-12!25;UBERON:0001981!3.12e-12!60;UBERON:0007500!3.12e-12!60;UBERON:0004537!3.12e-12!60;UBERON:0006965!3.12e-12!60;UBERON:0001986!9.81e-12!18;UBERON:0004638!9.81e-12!18;UBERON:0004852!9.81e-12!18;UBERON:0003914!2.89e-11!118;UBERON:0000487!3.10e-10!22;UBERON:0000490!1.03e-09!138;UBERON:0001637!2.35e-08!42;UBERON:0003509!2.35e-08!42;UBERON:0004572!2.35e-08!42;UBERON:0000477!1.37e-07!286;UBERON:0000947!2.27e-07!21;UBERON:0010191!2.27e-07!21;UBERON:0003915!2.40e-07!9;UBERON:0004700!2.40e-07!9;UBERON:0001917!2.40e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0006914;1.50e-26;25!UBERON:0004638;2.73e-24;18!UBERON:0001986;2.73e-24;18!UBERON:0004852;2.73e-24;18!UBERON:0000487;8.67e-23;22!UBERON:0000490;1.11e-14;33!UBERON:0001473;3.12e-12;8!UBERON:0004536;3.12e-12;8!UBERON:0006558;3.12e-12;8!UBERON:0003915;4.13e-11;9!UBERON:0004700;4.13e-11;9!UBERON:0001917;4.13e-11;9!UBERON:0000055;4.20e-10;65!UBERON:0002465;1.20e-09;10!UBERON:0002049;4.49e-09;75!UBERON:0007798;4.49e-09;75!UBERON:0001638;9.65e-08;9!UBERON:0003920;9.65e-08;9!UBERON:0004582;9.65e-08;9!UBERON:0004535;1.90e-07;109!UBERON:0000947;1.94e-07;21!UBERON:0010191;1.94e-07;21!UBERON:0007500;2.06e-07;56!UBERON:0001981;2.06e-07;56!UBERON:0004537;2.06e-07;56!UBERON:0004797;3.99e-07;4!UBERON:0000415;3.99e-07;4!UBERON:0007240;3.99e-07;4!UBERON:0005742;3.99e-07;4!UBERON:0005734;3.99e-07;4!UBERON:0004664;3.99e-07;4!UBERON:0004663;3.99e-07;4!UBERON:0005406;4.75e-07;2!UBERON:0005800;7.41e-07;2!UBERON:0001515;7.41e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0006914;1.50e-26;25!UBERON:0004638;2.73e-24;18!UBERON:0001986;2.73e-24;18!UBERON:0004852;2.73e-24;18!UBERON:0000487;8.67e-23;22!UBERON:0000490;1.11e-14;33!UBERON:0001473;3.12e-12;8!UBERON:0004536;3.12e-12;8!UBERON:0006558;3.12e-12;8!UBERON:0003915;4.13e-11;9!UBERON:0004700;4.13e-11;9!UBERON:0001917;4.13e-11;9!UBERON:0000055;4.20e-10;65!UBERON:0002465;1.20e-09;10!UBERON:0002049;4.49e-09;75!UBERON:0007798;4.49e-09;75!UBERON:0001638;9.65e-08;9!UBERON:0003920;9.65e-08;9!UBERON:0004582;9.65e-08;9!UBERON:0004535;1.90e-07;109!UBERON:0000947;1.94e-07;21!UBERON:0010191;1.94e-07;21!UBERON:0007500;2.06e-07;56!UBERON:0001981;2.06e-07;56!UBERON:0004537;2.06e-07;56!UBERON:0004797;3.99e-07;4!UBERON:0000415;3.99e-07;4!UBERON:0007240;3.99e-07;4!UBERON:0005742;3.99e-07;4!UBERON:0005734;3.99e-07;4!UBERON:0004664;3.99e-07;4!UBERON:0004663;3.99e-07;4!UBERON:0005406;4.75e-07;2!UBERON:0005800;7.41e-07;2!UBERON:0001515;7.41e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006914,2.49e-26,25;UBERON:0004638,4.81e-24,18;UBERON:0001986,4.81e-24,18;UBERON:0004852,4.81e-24,18;UBERON:0000487,1.43e-22,22;UBERON:0004535,5.89e-20,109;UBERON:0002049,1.20e-19,78;UBERON:0007798,1.20e-19,78;UBERON:0001009,3.44e-19,112;UBERON:0000055,8.28e-18,68;UBERON:0004872,4.40e-15,83;UBERON:0001473,3.17e-12,8;UBERON:0004536,3.17e-12,8;UBERON:0006558,3.17e-12,8;UBERON:0007500,3.41e-11,59;UBERON:0001981,3.41e-11,59;UBERON:0004537,3.41e-11,59;UBERON:0006965,3.41e-11,59;UBERON:0003915,5.08e-11,9;UBERON:0004700,5.08e-11,9;UBERON:0001917,5.08e-11,9;UBERON:0003914,8.39e-10,117;UBERON:0002465,1.21e-09,10;UBERON:0001638,1.03e-07,9;UBERON:0003920,1.03e-07,9;UBERON:0004582,1.03e-07,9;UBERON:0000947,2.73e-07,21;UBERON:0010191,2.73e-07,21;UBERON:0005406,4.00e-07,2;UBERON:0000415,5.94e-07,4;UBERON:0007240,5.94e-07,4;UBERON:0005742,5.94e-07,4;UBERON:0005734,5.94e-07,4;UBERON:0004664,5.94e-07,4;UBERON:0004663,5.94e-07,4 | |||
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| ||
|short_description=p@chr2:56144922..56144937,+ | |short_description=p@chr2:56144922..56144937,+ | ||
}} | }} |
Revision as of 05:01, 21 November 2012
Short description: | p@chr2:56144922..56144937, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:56144922..56144937, + |
Coexpression cluster: | C395_Synoviocyte_Cardiac_Fibroblast_mesothelioma_Endothelial_Chondrocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.96e-38 | 24 |
blood vessel endothelial cell | 4.81e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.81e-24 | 18 |
endothelial cell | 1.03e-23 | 36 |
meso-epithelial cell | 7.25e-23 | 45 |
lining cell | 1.57e-22 | 58 |
barrier cell | 1.57e-22 | 58 |
lymphangioblast | 1.58e-16 | 6 |
endothelial cell of lymphatic vessel | 1.58e-16 | 6 |
vascular lymphangioblast | 1.58e-16 | 6 |
fibroblast | 4.77e-14 | 76 |
GAG secreting cell | 3.03e-12 | 9 |
carbohydrate secreting cell | 3.03e-12 | 9 |
extracellular matrix secreting cell | 4.64e-12 | 15 |
vein endothelial cell | 9.55e-12 | 6 |
mesodermal cell | 1.47e-11 | 121 |
endothelial cell of artery | 5.08e-11 | 9 |
preadipocyte of the breast | 1.28e-09 | 3 |
stromal cell | 3.55e-09 | 28 |
endothelial cell of umbilical vein | 3.94e-09 | 3 |
chondroblast | 1.70e-08 | 6 |
chondrocyte | 1.70e-08 | 6 |
squamous epithelial cell | 7.02e-08 | 63 |
aortic endothelial cell | 1.19e-07 | 6 |
fibroblast of tunica adventitia of artery | 5.94e-07 | 4 |
fibroblast of the aortic adventitia | 5.94e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.