CL:0000213
From FANTOM5_SSTAR
| Name: | lining cell |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A cell within an epithelial cell sheet whose main function is to act as an internal or external covering for a tissue or an organism." [JB:jb] |
| Synonyms: | "boundary cell" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000215(barrier cell) |
|---|
Children
| is a: | CL:0000077 (mesothelial cell),CL:0000115 (endothelial cell),CL:0000214 (synovial cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10493-107B7 (mesothelioma cell line:ACC-MESO-1)
- 10494-107B8 (mesothelioma cell line:ACC-MESO-4)
- 10845-111E8 (mesothelioma cell line:NCI-H28)
- 10846-111E9 (mesothelioma cell line:NCI-H226)
- 10847-111F1 (mesothelioma cell line:NCI-H2052)
- 10848-111F2 (mesothelioma cell line:NCI-H2452)
- 10849-111F3 (mesothelioma cell line:Mero-14)
- 10850-111F4 (mesothelioma cell line:Mero-25)
- 10851-111F5 (mesothelioma cell line:Mero-41)
... further results Mouse (Mus musculus)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10493-107B7 (mesothelioma cell line:ACC-MESO-1)
- 10494-107B8 (mesothelioma cell line:ACC-MESO-4)
- 10845-111E8 (mesothelioma cell line:NCI-H28)
- 10846-111E9 (mesothelioma cell line:NCI-H226)
- 10847-111F1 (mesothelioma cell line:NCI-H2052)
- 10848-111F2 (mesothelioma cell line:NCI-H2452)
- 10849-111F3 (mesothelioma cell line:Mero-14)
- 10850-111F4 (mesothelioma cell line:Mero-25)
- 10851-111F5 (mesothelioma cell line:Mero-41)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000213 (lining cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.38e-90 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_072930dc9969cd3fef8b3e480eb8d3b5 | p@chr6:3753188..3753192, - |
| 9.38e-90 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_072930dc9969cd3fef8b3e480eb8d3b5 | p@chr6:3753188..3753192, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:85801525..85801529,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p6@Adamts1 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:43407825..43407830,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr4:43407825..43407830, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:76329688..76329692,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr5:76329688..76329692, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:3311867..3311873,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr8:3311867..3311873, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:66883923..66883955,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr1:66883923..66883955, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113554186..113554192,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr13:113554186..113554192, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:89310639..89310641,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr8:89310639..89310641, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:48398664..48398684,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr6:48398664..48398684, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:111108947..111108951,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr8:111108947..111108951, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:33088768..33088773,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr5:33088768..33088773, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:47491114..47491123,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr18:47491114..47491123, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:92938260..92938264,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr6:92938260..92938264, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:65159026..65159034,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr18:65159026..65159034, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:62199266..62199267,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr9:62199266..62199267, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:4336287..4336296,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p8@Map3k8 |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:35881716..35881727,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr18:35881716..35881727, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:5840965..5840966,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr13:5840965..5840966, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:118287827..118287833,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr11:118287827..118287833, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:86335502..86335509,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr4:86335502..86335509, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82207617..82207621,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr15:82207617..82207621, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:8471698..8471701,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr10:8471698..8471701, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:84756280..84756286,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr2:84756280..84756286, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:45920408..45920437,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:133323630..133323631,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr2:133323630..133323631, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:173044327..173044331,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr1:173044327..173044331, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:8928284..8928331,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr14:8928284..8928331, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35096519..35096524,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr17:35096519..35096524, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:86713876..86713879,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr8:86713876..86713879, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:45920408..45920437,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr9:45920408..45920437, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:111108947..111108951,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr8:111108947..111108951, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:68437375..68437378,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr11:68437375..68437378, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:91441074..91441080,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr6:91441074..91441080, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34796428..34796430,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr17:34796428..34796430, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93942324..93942342,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr10:93942324..93942342, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chrX:166418658..166418683,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chrX:166418658..166418683, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:32178407..32178408,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr15:32178407..32178408, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113542610..113542614,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr13:113542610..113542614, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:64344878..64344887,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr5:64344878..64344887, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:107196799..107196814,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr11:107196799..107196814, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:32178407..32178408,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr15:32178407..32178408, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691503..86691504,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr12:86691503..86691504, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:100752983..100752984,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr12:100752983..100752984, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:133323630..133323631,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr2:133323630..133323631, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:24807620..24807650,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr17:24807620..24807650, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82193340..82193343,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr15:82193340..82193343, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:39297570..39297573,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr18:39297570..39297573, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr14:15179132..15179141,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p8@Il3ra |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093377..35093381,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr17:35093377..35093381, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:104857794..104857802,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr3:104857794..104857802, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:35881716..35881727,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr18:35881716..35881727, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:96429295..96429302,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr13:96429295..96429302, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:44793802..44793835,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr18:44793802..44793835, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr9:42915220..42915225,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr9:42915220..42915225, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093616..35093631,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr17:35093616..35093631, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:52781901..52781904,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr7:52781901..52781904, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:89310639..89310641,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr8:89310639..89310641, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:38831400..38831402,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr18:38831400..38831402, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93819538..93819549,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr10:93819538..93819549, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:74684893..74684910,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr12:74684893..74684910, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:44793802..44793835,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr18:44793802..44793835, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:11183699..11183703,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr8:11183699..11183703, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr1:66883923..66883955,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr1:66883923..66883955, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:85288471..85288502,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr12:85288471..85288502, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:5840965..5840966,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr13:5840965..5840966, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113554186..113554192,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr13:113554186..113554192, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35096519..35096524,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr17:35096519..35096524, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:81955014..81955018,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr12:81955014..81955018, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr8:127816016..127816021,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr8:127816016..127816021, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:30944451..30944485,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr16:30944451..30944485, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr15:82209805..82209851, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr1:132405466..132405470, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85585949..85585969,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr10:85585949..85585969, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr13:96429295..96429302, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:12388232..12388237,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr17:12388232..12388237, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:11009028..11009039,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p4@Gm4262 |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:100752983..100752984,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr12:100752983..100752984, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr6:51831254..51831256,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:11935531..11935538,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr2:11935531..11935538, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:121593688..121593695,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr3:121593688..121593695, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr19:29573929..29573932, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:48685851..48685860,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr11:48685851..48685860, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:115280630..115280662,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr11:115280630..115280662, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr18:5125608..5125613, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr15:90508949..90508955, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr5:114422970..114422985, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr17:34798555..34798562, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr16:91441786..91441787, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113543694..113543702,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr13:113543694..113543702, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:121593688..121593695,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr3:121593688..121593695, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr4:126939557..126939562, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr12:86691530..86691535, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr15:82207617..82207621, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:24807620..24807650,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr17:24807620..24807650, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:53111093..53111095,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr5:53111093..53111095, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr18:39513150..39513152, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113542610..113542614,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr13:113542610..113542614, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr17:35093616..35093631, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_5b0c75943c8b43fa20ca5af38a0f0d0e | p@chr4:137487112..137487117, + |
