FFCP PHASE1:Hg19::chr4:74276021..74276028,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000181!2.80e-49!12;CL:0000417!2.80e-49!12;CL:0000668!2.80e-49!12;CL:0000414!2.80e-49!12;CL:0000412!2.80e-49!12;CL:0000182!2.80e-49!12;CL:0000223!2.35e-13!59 | |ontology_enrichment_celltype=CL:0000181!2.80e-49!12;CL:0000417!2.80e-49!12;CL:0000668!2.80e-49!12;CL:0000414!2.80e-49!12;CL:0000412!2.80e-49!12;CL:0000182!2.80e-49!12;CL:0000223!2.35e-13!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;5.68e-22;12 | |ontology_enrichment_celltype_v019=CL:0000182;5.68e-22;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.48e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | |ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.49e-55!19;UBERON:0006925!4.49e-55!19;UBERON:0008836!4.49e-55!19;UBERON:0008835!1.57e-47!22;UBERON:0003894!1.57e-47!22;UBERON:0009854!1.89e-45!23;UBERON:0007499!8.61e-42!25;UBERON:0009497!8.61e-42!25;UBERON:0000015!8.61e-42!25;UBERON:0002423!8.61e-42!25;UBERON:0006235!8.61e-42!25;UBERON:0004161!8.61e-42!25;UBERON:0005057!3.58e-40!26;UBERON:0009856!3.58e-40!26;UBERON:0002365!1.22e-33!31;UBERON:0002330!1.22e-33!31;UBERON:0002368!9.38e-30!35;UBERON:0003929!3.88e-24!54;UBERON:0000949!4.72e-23!45;UBERON:0005172!8.87e-19!55;UBERON:0005173!8.87e-19!55;UBERON:0002530!1.79e-17!59;UBERON:0002417!6.96e-17!61;UBERON:0000916!6.96e-17!61;UBERON:0005911!1.09e-15!82;UBERON:0001041!2.67e-10!98;UBERON:0004921!1.25e-09!129;UBERON:0004185!1.25e-09!129;UBERON:0005177!2.21e-09!107;UBERON:0000490!5.01e-09!138;UBERON:0009569!7.53e-09!113;UBERON:0002405!1.33e-08!115;UBERON:0003914!1.90e-08!118;UBERON:0001007!6.82e-08!155;UBERON:0001555!6.82e-08!155;UBERON:0007026!6.82e-08!155;UBERON:0000466!7.19e-08!126;UBERON:0000077!1.32e-07!130;UBERON:0004119!3.57e-07!169;UBERON:0000925!3.57e-07!169;UBERON:0006595!3.57e-07!169;UBERON:0005256!7.46e-07!143 | |ontology_enrichment_uberon=UBERON:0002107!4.49e-55!19;UBERON:0006925!4.49e-55!19;UBERON:0008836!4.49e-55!19;UBERON:0008835!1.57e-47!22;UBERON:0003894!1.57e-47!22;UBERON:0009854!1.89e-45!23;UBERON:0007499!8.61e-42!25;UBERON:0009497!8.61e-42!25;UBERON:0000015!8.61e-42!25;UBERON:0002423!8.61e-42!25;UBERON:0006235!8.61e-42!25;UBERON:0004161!8.61e-42!25;UBERON:0005057!3.58e-40!26;UBERON:0009856!3.58e-40!26;UBERON:0002365!1.22e-33!31;UBERON:0002330!1.22e-33!31;UBERON:0002368!9.38e-30!35;UBERON:0003929!3.88e-24!54;UBERON:0000949!4.72e-23!45;UBERON:0005172!8.87e-19!55;UBERON:0005173!8.87e-19!55;UBERON:0002530!1.79e-17!59;UBERON:0002417!6.96e-17!61;UBERON:0000916!6.96e-17!61;UBERON:0005911!1.09e-15!82;UBERON:0001041!2.67e-10!98;UBERON:0004921!1.25e-09!129;UBERON:0004185!1.25e-09!129;UBERON:0005177!2.21e-09!107;UBERON:0000490!5.01e-09!138;UBERON:0009569!7.53e-09!113;UBERON:0002405!1.33e-08!115;UBERON:0003914!1.90e-08!118;UBERON:0001007!6.82e-08!155;UBERON:0001555!6.82e-08!155;UBERON:0007026!6.82e-08!155;UBERON:0000466!7.19e-08!126;UBERON:0000077!1.32e-07!130;UBERON:0004119!3.57e-07!169;UBERON:0000925!3.57e-07!169;UBERON:0006595!3.57e-07!169;UBERON:0005256!7.46e-07!143 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.99e-37;19!UBERON:0006925;1.99e-37;19!UBERON:0002423;1.39e-28;25!UBERON:0002365;4.38e-23;31!UBERON:0002330;4.38e-23;31!UBERON:0002368;6.11e-20;33!UBERON:0000949;1.83e-14;43!UBERON:0005172;1.97e-10;52!UBERON:0005173;1.97e-10;52!UBERON:0002417;4.64e-08;58!UBERON:0000916;4.64e-08;58!UBERON:0002530;1.30e-07;57!UBERON:0001007;1.72e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.99e-37;19!UBERON:0006925;1.99e-37;19!UBERON:0002423;1.39e-28;25!UBERON:0002365;4.38e-23;31!UBERON:0002330;4.38e-23;31!UBERON:0002368;6.11e-20;33!UBERON:0000949;1.83e-14;43!UBERON:0005172;1.97e-10;52!UBERON:0005173;1.97e-10;52!UBERON:0002417;4.64e-08;58!UBERON:0000916;4.64e-08;58!UBERON:0002530;1.30e-07;57!UBERON:0001007;1.72e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.91e-37,19;UBERON:0006925,1.91e-37,19;UBERON:0008836,1.91e-37,19;UBERON:0008835,2.03e-32,22;UBERON:0003894,2.03e-32,22;UBERON:0009854,4.92e-31,23;UBERON:0007499,1.35e-28,25;UBERON:0009497,1.35e-28,25;UBERON:0000015,1.35e-28,25;UBERON:0002423,1.35e-28,25;UBERON:0006235,1.35e-28,25;UBERON:0004161,1.35e-28,25;UBERON:0009856,1.62e-27,26;UBERON:0002365,3.66e-23,31;UBERON:0002330,3.66e-23,31;UBERON:0002368,1.43e-20,35;UBERON:0000949,4.25e-16,45;UBERON:0003929,1.76e-13,54;UBERON:0005172,1.76e-13,54;UBERON:0005173,1.76e-13,54;UBERON:0002530,2.28e-12,59;UBERON:0002417,3.62e-12,60;UBERON:0000916,3.62e-12,60;UBERON:0005911,5.51e-09,82;UBERON:0001041,1.75e-08,87;UBERON:0005177,2.43e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,4.91413608338813,3.54473944008842,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29503302718727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709048640765013,0.741742725430498,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.06037285229453,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.60530208930985,4.91413608338813,3.54473944008842,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47298427954533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.29503302718727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709048640765013,0.741742725430498,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.06037285229453,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p43@ALB | |short_description=p43@ALB | ||
}} | }} |
Revision as of 05:35, 21 November 2012
Short description: | p43@ALB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_43_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -68bp_to_ENST00000507673_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.48e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-37 | 19 |
digestive gland | 1.91e-37 | 19 |
liver bud | 1.91e-37 | 19 |
hepatic diverticulum | 2.03e-32 | 22 |
liver primordium | 2.03e-32 | 22 |
digestive tract diverticulum | 4.92e-31 | 23 |
epithelial sac | 1.35e-28 | 25 |
epithelium of foregut-midgut junction | 1.35e-28 | 25 |
anatomical boundary | 1.35e-28 | 25 |
hepatobiliary system | 1.35e-28 | 25 |
foregut-midgut junction | 1.35e-28 | 25 |
septum transversum | 1.35e-28 | 25 |
sac | 1.62e-27 | 26 |
exocrine gland | 3.66e-23 | 31 |
exocrine system | 3.66e-23 | 31 |
endocrine gland | 1.43e-20 | 35 |
endocrine system | 4.25e-16 | 45 |
gut epithelium | 1.76e-13 | 54 |
abdomen element | 1.76e-13 | 54 |
abdominal segment element | 1.76e-13 | 54 |
gland | 2.28e-12 | 59 |
abdominal segment of trunk | 3.62e-12 | 60 |
abdomen | 3.62e-12 | 60 |
endo-epithelium | 5.51e-09 | 82 |
foregut | 1.75e-08 | 87 |
trunk region element | 2.43e-07 | 101 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.