FFCP PHASE1:Hg19::chr2:152830507..152830516,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=785 | |EntrezGene=785 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1404 | |HGNC=1404 | ||
|TSSclassifier=S | |||
|UniProt=F8WA06,O00305 | |UniProt=F8WA06,O00305 | ||
|association_with_transcript=-22bp_to_ENST00000360283,ENST00000475848,NM_001005747,uc002txy.2,uc002tyb.2_5end | |association_with_transcript=-22bp_to_ENST00000360283,ENST00000475848,NM_001005747,uc002txy.2,uc002tyb.2_5end | ||
Revision as of 01:22, 9 July 2013
| Short description: | p10@CACNB4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_10_at_CACNB4_5end |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | -22bp_to_ENST00000360283, ENST00000475848, NM_001005747, uc002txy.2, uc002tyb.2_5end |
| EntrezGene: | CACNB4 |
| HGNC: | 1404 |
| UniProt: | F8WA06O00305 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p10@CACNB4 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| posterior neural tube | 3.10e-47 | 15 |
| chordal neural plate | 3.10e-47 | 15 |
| segmental subdivision of hindbrain | 2.79e-41 | 12 |
| hindbrain | 2.79e-41 | 12 |
| presumptive hindbrain | 2.79e-41 | 12 |
| segmental subdivision of nervous system | 3.90e-38 | 13 |
| cerebellum | 1.13e-30 | 6 |
| rhombic lip | 1.13e-30 | 6 |
| medulla oblongata | 6.06e-27 | 3 |
| myelencephalon | 6.06e-27 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
