FFCP PHASE1:Hg19::chr22:50331023..50331030,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=W | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
Revision as of 10:43, 9 July 2013
| Short description: | p@chr22:50331023..50331030, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr22:50331023..50331030, + |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr22:50331023..50331030+ |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| vein endothelial cell | 6.89e-45 | 6 |
| endothelial cell | 5.43e-33 | 36 |
| blood vessel endothelial cell | 3.12e-32 | 18 |
| embryonic blood vessel endothelial progenitor cell | 3.12e-32 | 18 |
| endothelial cell of vascular tree | 1.64e-29 | 24 |
| meso-epithelial cell | 6.37e-26 | 45 |
| endothelial cell of umbilical vein | 4.50e-23 | 3 |
| light melanocyte | 7.06e-23 | 3 |
| lining cell | 1.40e-19 | 58 |
| barrier cell | 1.40e-19 | 58 |
| Ontology term | p-value | n |
|---|---|---|
| blood vessel endothelium | 3.12e-32 | 18 |
| endothelium | 3.12e-32 | 18 |
| cardiovascular system endothelium | 3.12e-32 | 18 |
| vein | 8.25e-30 | 9 |
| venous blood vessel | 8.25e-30 | 9 |
| venous system | 8.25e-30 | 9 |
| simple squamous epithelium | 3.90e-26 | 22 |
| squamous epithelium | 7.70e-23 | 25 |
| locus ceruleus | 7.88e-16 | 2 |
| brainstem nucleus | 7.88e-16 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
